Gene CND04560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND04560 
Symbol 
ID3257106 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp1258529 
End bp1259377 
Gene Length849 bp 
Protein Length177 aa 
Translation table 
GC content46% 
IMG OID638256391 
Productexpressed protein 
Protein accessionXP_570610 
Protein GI58266908 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTCTACTCG TTGAATCTTG ATTTCCCCGG GTGAAAAGTA TAGTTTTATC CTTGCACTGC 
AAGCTCCAAC TGATCAAAGA CTGTAAATAA TAGTATGTCT CTAACTAGTG TCACTCGCGT
CGTATCCAAA TCCATCCTCG GCGCTTCCTT TACTAGCACA ACTCGCAGGC TTACCACTAC
CGTTCCCAGA TTTGGTAGAA TGCCTCCTCC TGCTCACAAG ATGGCCCACT TCCCGAGGAT
CACATCCTCT CTTCCCTCAG AACACTCTGA GTTTAGAACA GTGATGTGGA CGGGCGAGAG
CAGTCAACTT GTCCTCAGTA AGTGACGAGT TCCAGATCAT TTAATAGCGA TGATCTTTAG
TCTGATTGAA TCTTCCAGTG ACTATCCCTG TCGGAGGAGA AATAGGGGAA GAAATTCACC
ATGTTGACCA ACACTTGGTT TTCACCTCTG GTACTGCCAA GGCCATTGTT GGAGGAGAAG
AAAAAGAGAT CAAGGCTGGA GATCTTGTCA TCGTTCCTCA GGGTACCAAG CATAACTGTG
AGAGTGCTTT TACGCCAGCG GTAAAAAAAT AAAACTGATC ATCTGTGGTA GTCGTCAATA
CGGGCCCTAC CCCTCTTTGC CTTTTTACTG TATATGCTCC GGCCGAGCAT GCCGAGACAA
CAGTCAACAA AACGAAGGAG GAAGGGGATA AATTGGAAGA CGAGGGCAAG GATGAGCCTC
CAAAGTGGGC AGTTAGGAAG TAGATGATAG AATAAATTAT CGTTCGCGAG CGTGGATTTA
GTGGTTCGCT ATGTAAAGAA ATCAACGTTA CACATTTTGA GATCAGATGC ATAGCGACGC
TAAAAAATC
 
Protein sequence
MSLTSVTRVV SKSILGASFT STTRRLTTTV PRFGRMPPPA HKMAHFPRIT SSLPSEHSEF 
RTVMWTGESS QLVLMTIPVG GEIGEEIHHV DQHLVFTSGT AKAIVGGEEK EIKAGDLVIV
PQGTKHNFVN TGPTPLCLFT VYAPAEHAET TVNKTKEEGD KLEDEGKDEP PKWAVRK