Gene CND04400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND04400 
Symbol 
ID3257014 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp1215547 
End bp1216742 
Gene Length1196 bp 
Protein Length322 aa 
Translation table 
GC content54% 
IMG OID638256375 
Productconserved hypothetical protein 
Protein accessionXP_570616 
Protein GI58266920 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0203] Ribosomal protein L17 
TIGRFAM ID[TIGR00059] ribosomal protein L17 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGATGAAGCA CGGCATACAC CAGCGCAAGC TCGGCAGGAT GCCAGCACAC AGAATCGCAC 
TCCTCCGGTG AGCGCAGCCC GTTACTCAGC CCGGGGCCGA AAATCCGTTC TGACAGTCGC
AGAAATCTTG TTTCCGCCTT GCTGCACCAT GAGTCTATCA AGACGACCCT GCCAAAGGCG
AAGGAGGCCG CAAAGATGGC CGAAAAGGTG CGCGTGCTAC GGGTCGATAT ATCGCCCAGT
ACGAGACTGA CGTTCCTTCC AGATCATCAC GCTCGGCAAG AAGGGCACTA ATCAGGCAAG
AAGCAAAGCT ACTGCCTACC TCATGGTATG TCCTGATGTG TACCGGACTA TCGTTGCATA
GCGGTAACAC ACTTGCAGCC CGCACACCAC GCTCCATCAT CGTCGTACGC TCCCTCCCCA
TCCAACCCTA CACCTACCCT TCCCCCGCTT GCCCATCCCC AATCCCTCGA TCCCGAAACT
TTTACCCCGC CCACCTCCCT TCTCCCCAAG TTATTCACCA CCCTCGCGAC CAGATATGCT
GCGCGTCCGG GAGGATATAC TCGGATTCAC AAATTTGGAC GTAGACCTGG AGATAATGCT
CCGCATGCCA TCTTGACGTT GGTCGACGGG CCGAGAGATT TGAAGTTTGA AATGACAGCT
CGAACAGCCG GGAAGGAGAG TTTAGATGCA ATGGAAGGCT GGGAGCAAAT TGAGAGTAGT
GTTGACGAAT GGGAGGGATT ATCCGAAAAA ACGAAGAGAG ATGTCGCAAA GGTCCTGAGG
TACCGTAGTG AAGACGATAA AAAGTTGTTC AAAGCGAAAG CTACATCGTT TTCTGTGAGT
TTTCTTCTTG GCTGCTATCC ATTTCATAAC GTATATCGGT TACTGATGTG TGATAGGACA
CCGTCACTGT TGAAGAATCA GCCTATGGGG GTGTTCGAAA ACCCGCTCTT GAGCTACAGA
AGCCCACGTT CCGTGCACCT AGTCTGAACC TTCCTAGATC GGGCAAGCAC ATACATGCCG
GCGAACGACT TTCCGGAATG TCAGTCGCCC ACACAGGCTT GGGGTTAGCT CGCGGGGCTT
TGGCTCGAAG TAAATCAGGC AAGAGCGGAC TGGATAGGAC CCCGTTGCTT TGGGGACAGT
CCAACAGGCT GGACAGAGTC AAGGGCGAGG TGGTCACGTC AAGCGCTGAC GCTTAG
 
Protein sequence
MKHGIHQRKL GRMPAHRIAL LRNLVSALLH HESIKTTLPK AKEAAKMAEK IITLGKKGTN 
QARSKATAYL MPAHHAPSSS YAPSPSNPTP TLPPLAHPQS LDPETFTPPT SLLPKLFTTL
ATRYAARPGG YTRIHKFGRR PGDNAPHAIL TLVDGPRDLK FEMTARTAGK ESLDAMEGWE
QIESSVDEWE GLSEKTKRDV AKVLRYRSED DKKLFKAKAT SFSDTVTVEE SAYGGVRKPA
LELQKPTFRA PSLNLPRSGK HIHAGERLSG MSVAHTGLGL ARGALARSKS GKSGLDRTPL
LWGQSNRLDR VKGEVVTSSA DA