Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND03750 |
Symbol | |
ID | 3257225 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | - |
Start bp | 1035665 |
End bp | 1040554 |
Gene Length | 4890 bp |
Protein Length | 1314 aa |
Translation table | |
GC content | 52% |
IMG OID | 638256310 |
Product | GrfA protein, putative |
Protein accession | XP_570187 |
Protein GI | 58266062 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CATCTGCTCT CCTCCCTGCC GCCTCCGCCC ACAGTTGCAG CAGCGCTCCT CCCTGCCGCC ACCGCTGTTC AACCTCCACG CTCGTTCCAC ACCACCGTCA TCTCGCACTG GACCACTCGT CGTGTCGCGC AGACAGTGAT CTTTGCTCCC TCGCAGGCTG GACCAGCAGC CAGACGCTCG CCGCTCTTTT CTTCCCGTGC AGGGGTGGCT CGGACAGCAG AGTCGATACA CTGCGTATCT GGTGGGCGCG CGTGCACGCT CGGACCGCCG GACGTGGTTT ACCTAATACC CGCTTGCGGT GCACGTCCAC GGTGCGCTGG TGGTAAACAA GGACTCGCCG ATGCTGTATC GCCCATACAA CCCCCAACCC ATGCCGTCGC CACAGCTTCC CCTGGCTGGG CCCTCCCTTC CCTCCGCCCG CCACAGACCG CGCACGCTTT CCCTCCATTC CTACGACAGC CACCCCCGAC ATGGGGATCA AACACATCCG CCGCGCAAGT ATACAGACCC CGTTCCACAT GCATCGCCCA GCCAGCGCGA GGCCCAGGGA CAAGACCAAG AGCTCGACGT GGATCTTGAC GCGTATTCGG CCGCCGACTT TGAAGCTGAT GAAGACTCGC CGGACAGGGA TCCCACCCTG AGCTTTGTGA CGGCTTCGAC CATCGATTCC GTGGCTGGCG GCCCACAAGT AACGACGACA TATGGCCACT CCTCCCGTAT GGCAGATGCC AAGGGTGAGC AGGAACCTAG CTTATCTATG CGCTCGACAA GTGGTCGCGC TACTACATAT TCCTCGGCCG AATCGTCTAC CGGCTCCGGC GCCTTTTCCT ACCACACCTA CTCTGATCAC ATCTATACTC CCCCGCCACC CCTTCCCCAA GTACCAGATG GATACAACTC TTCGGATTCG CCAGGTATGG CTGCCGATTA TCCCATCCCA CGTAGTAACG CAGATCAATC CCATGCTCGT CAGATTCGTC CTCCCCTTTC ACCCTCACAT TCCTTTACAC ATAGACCATG GAAACGCGAT ATCGTCAACC GTTTACGAAG CGACTCGGCA TCATCGGCTT TCACTGCAGC TTCAGTGTCT ACGGACAACT CGGCTGCATC GTCCAGTCGG ATTCCACTGC CAGATGCGGC GTATCACTAT GCGTATGATG ACTTTACGTT GCCCTACGAA CAGGAGCAGG CTGAGCCTGA AGCCCTTGCG ATGATCAAGG AAGGTAGAGA AAAGCTCTTG AATATGGAGA AGATTGAGGC AATGGGTGGC GCGGAAGCCC TTGGTGATAG CGTGATTTGC TCTCTGGCCG GCAAGTACAA ATCGTGTTTC CATGATATGA CATTTGCTGA TTCTGTTGAT CAGGCGTGAC ACATCTTCTT CTACCATCAT GTGGACGACG AATACTCGAT CTCCTCCCAC GTTTGCTATC GGTACTTGCG CCGTCATTGG TGGTATTGGA CCTGTCCGAT AATAATCTGG CTCGTTTACC TGATTCACTT CAGTGTTGCA CTTCATTGGA AGAGCTCAAC CTGTCGGAAA ACCCTTTGAG ACTTCTCCCA CAGTGGATGG GAAATCTGAC CGCTTTGAGA GTACTCGTGG TAGACGGATG TGGACTTACG GTTCTACCAC AAGGGCTGTG CCACCTATGT TTCCTGCATA CCATCTGTGG TAAGTAAGAA TACGATTCCT TGTAATAATG ATAGTGCTGA ATATCTATCA GTCCGACGGA ACAAACTGGT GTGTTTACCA ACATGGCTTT GTCTTTTGAA TCAGTTGGAG ACGCTCAAGG TCGATGGGAA TCCTTTCACC CCTGAATGGG CTCAGATTGT GCCTCCTATC CTGGAAGGTC CCTTCCCGAT GACGGCGTCC AGCTCGAGGA GACGAAATGC CCATCATCGA CATCTCTCCA TCAATAATGG TATTCGCACT CCGGTTTCTA TGGCATCTTT GGAAAGCTCT GACCAAGAAC CTAACTCGGC TTCGTCATCT ACCCCCAACC TCGACCAATC ATTTGGCACT GCTTCTTCTT CTGCGTCCCA GTCAACATAT CTTGTGTCGG CTTTGAGCTC AATTGCCGAA AACAACCTCC ATTCCGCTCC TCTTCCCGAA ACTCATGCAA ATGGTGAGGC CTTGGCTTCC CCTGGACCAG TGACGGAGAC GCCTCAATCT CACGGCGGCT TGCGAAAGAT GCGCTCGGCG GGTGCACTCC TAAGATCTCT CGACCAATCG GCTTCGAACA CCACTTCGAA TTTTACACCG CCGCGTCCAG TGATCGCTGA GCGTTCTGCT ACAGAAGGGC GGCGGGCTGC GAGCGCGATG GGTAATTACC ACGAGGAACC TCAGATCCAT CCAGGAAAAC TCGTCAAGTC TTCTACTCCG AAAACCACTA CACCACCGAC TAAGACTGGC AGATGGGGAT TCCTTCGTAA AATGTCCATG AATCGACTTC GACCGGATAA GGAAAAAGTA GCTGCCATCG CCGCTTCAGC CTCTGACAAC CTCAAGTCCC TCCCGCCCCT TCCTCCCATT CGTCACCAAC ATTCCGAGCC TATACAACAT GTCACCATCC GCCCAGGAAT GGTTAGCACC ATGTCCGCAG CCACATTGCC AAGCCGGAAG ATAGCAGACT TTGAGGGGTC AGAGTTTGGC CAAATGAGCA GCTGTTCAAC ACCCTCGGCA TTGACAATGC CTATATCGGG GCTGCCATAC CAGCCGTCTC CCATGTCAAT TGCTTCGATT GGGTTCGGGT CGGCATTGCG AGGAAAGAGG CGGAGTTTCT TACCGATTGA TGGGCCACCT TCAATCAATG TCCAGATCCC TACGTCTGCC TTCTCGACCG CAGGTAGTGC AGATAACATT TCGCAACTAG CCACTGAAGC ACCCACTTCC CAAACCACAG CACTACCTTA CACCCCAGCC CAGCCTATGG TTGGATCTCC CGTCACGGAT ACCGAGTATG AAGAAAGGTA TACCAGGGGA CTTGAAACTA TAAAGCTTAT TCTTCGTGAT CTCCACGACT TGTCCAGGCG TTCAATTATG CCTCGTGATG GGTCCACAGT CATGGGTAAT AGCAGTGCGG ATAGCAGTTA CGCCGGCTCT ACCGTTCCCT CCGAACACCC GGGCTCCCCC TTATCCTCAA ATCGGGATTC GTTTATCAAT GTTCGACAGG CTAGGCGGCC GACTCTTGAA GGCGGAGACT CTAGAGATTC GCCGGCGGCT GATTCAGAAG AATTTGGTGA AAGAGAACCA TCCTTATCCG GCAAAAAGTT CAAGAATGAC AAGTCAAAGC GAACAAGATG TATCCATGAG ATATGGGAAA CCGAGAGGAC CTATGTTCGG AATCTAGGTG AATTGGTGAC CATCTACGTT CGACCAGCCT CCCAACCTGT CAACCAAAGC AAATCCGTTG TGGAGACTGT TATCCCTGCT GCTGAGCGCA AAATCGTGTT TGGCGGCGTG GAGAGCATCC TTGCCATTCA TCGAGATAAT TTCTTGCCCG CCTTGGAAAC GGTTTTGAAA CAGTTGATCG AAAATGGGGA TGACGAAAAG GGCATTTTGT CTATCGACAC TGCATACAGT GTCGGCGAAG TTTTTAGGAC TTACATTGCC TACATGAAGC AGTATTCCAC GTATATCACG AATTTCGATA ACGCACTGGC TCGAATGAAG ACTTGGTCAT TGTCAAATTC TGGTAGCTCG ACCCCTGCAT TCTCGGGCAA ATCGTCAGCC GCAAATGCCT CTGTGAACGC ATTGTCTGCT GGAATGGGCG CTGTCTCGCT GTCAGCATCA GCAGTTCCAA CAACTTCCGG GCAATCTATG TCATCGAGTC AAAGGAAACG AGTCAAGGCT TTCCTGAAAA AGGCCAGGGA GCACCCCATG CATTCCCAAA TCAGTCTGGA AAGCTATCTG CTTTTGCCGA TTCAAAGGGT TCCTAGGTAC AAGCTGCTTG TGAGTGTTTT TTATATATAA ATGAGATTGA TAATCTTTTG CTGATTCTTT TAAAGCTCAC TGAACTTGCC ATGTGCACGC CTGCCCGCTC TGACGGTCTG CGAGACGCTC TGGATGACGC GCTCACTGAA ATTTCTAGCC TTGCCTCACT CATGAACGAG GAAAAGCGTG ACGCCGATTC TCGATTGCGT CTTCTCGATT GGCAAAAACG ATTCACAAAT TCGGGGCGCT CTCCTCTTGT TCAGCCTCAT CGTCGCCTTG TCATGGAAGG CCCACTTACA CTGTCTCGTA TCGTCAAAAA AGCTTCTACG TTTGTAGAGT GTGAGACTGT GGTCAAAGGC GATGGGGACC ACACGATCAT GCCCGGCAAG GCCGTTGTCC CAGTTGACTA TGTCATGCCA GAATCCGTAG AGAGAGAAGT GATGTTGATT TTATGTTCTG ATATGATGGT GCTGGCGACA GATAGGGGAG AAGGGTGGGA CGGGCATGTG AACGTTTTCA ACGTATTGAG GATGGCCACA ATGCAGGAAC CTGCTAGCTT AACGGCTGGC AATATCTTGA GGGTCGTGGA TAATAACGTA AGTCGAGCCA TATGCCAGAT ATGTTGCCAA TAGACGCTGA CTTGGCGCTA GTCGATTTAT TATTTTAGAG GAACATCTCG TGAAAATACG TTGCAATGGT GTAGGGCAAT CAACTCTGCT CGGCGGTGAT ATTGAGGTGG AATGGATTAG TAATCATCAG AAATGGATAT TTGCAAGGGA TACGGTTGGC CCGTCTATCA TTTTTTATGA AATTTCATGC GATAGCTTTA CGATTTTTCA GGTTAACGAC CCTTTTGAGG TAGACTTGTG TACTCTTTTT TTTTATCTGT AACAGTAGTA GAATAGCCTG ATGATATCCG AGGCGTTGAC GATTGCCAAC AGCATGTATG GCCTGGCCTG
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Protein sequence | MLYRPYNPQP MPSPQLPLAG PSLPSARHRP RTLSLHSYDS HPRHGDQTHP PRKYTDPVPH ASPSQREAQG QDQELDVDLD AYSAADFEAD EDSPDRDPTL SFVTASTIDS VAGGPQVTTT YGHSSRMADA KGEQEPSLSM RSTSGRATTY SSAESSTGSG AFSYHTYSDH IYTPPPPLPQ VPDGYNSSDS PGMAADYPIP RSNADQSHAR QIRPPLSPSH SFTHRPWKRD IVNRLRSDSA SSAFTAASVS TDNSAASSSR IPLPDAAYHY AYDDFTLPYE QEQAEPEALA MIKEGREKLL NMEKIEAMGG AEALGDSCCT SLEELNLSEN PLRLLPQWMG NLTALRVLVV DGCGLTVLPQ GLCHLCFLHT ICVRRNKLVC LPTWLCLLNQ LETLKVDGNP FTPEWAQIVP PILEGPFPMT ASSSRRRNAH HRHLSINNGI RTPVSMASLE SSDQEPNSAS SSTPNLDQSF GTASSSASQS TYLVSALSSI AENNLHSAPL PETHANGEAL ASPGPVTETP QSHGGLRKMR SAGALLRSLD QSASNTTSNF TPPRPVIAER SATEGRRAAS AMGNYHEEPQ IHPGKLVKSS TPKTTTPPTK TGRWGFLRKM SMNRLRPDKE KVAAIAASAS DNLKSLPPLP PIRHQHSEPI QHVTIRPGMV STMSAATLPS RKIADFEGSE FGQMSSCSTP SALTMPISGL PYQPSPMSIA SIGFGSALRG KRRSFLPIDG PPSINVQIPT SAFSTAGSAD NISQLATEAP TSQTTALPYT PAQPMVGSPV TDTEYEERYT RGLETIKLIL RDLHDLSRRS IMPRDGSTVM GNSSADSSYA GSTVPSEHPG SPLSSNRDSF INVRQARRPT LEGGDSRDSP AADSEEFGER EPSLSGKKFK NDKSKRTRCI HEIWETERTY VRNLGELVTI YVRPASQPVN QSKSVVETVI PAAERKIVFG GVESILAIHR DNFLPALETV LKQLIENGDD EKGILSIDTA YSVGEVFRTY IAYMKQYSTY ITNFDNALAR MKTWSLSNSG SSTPAFSGKS SAANASVNAL SAGMGAVSLS ASAVPTTSGQ SMSSSQRKRV KAFLKKAREH PMHSQISLES YLLLPIQRVP RYKLLLTELA MCTPARSDGL RDALDDALTE ISSLASLMNE EKRDADSRLR LLDWQKRFTN SGRSPLVQPH RRLVMEGPLT LSRIVKKAST FVECETVVKG DGDHTIMPGK AVVPVDYVMP ESVEREVMLI LCSDMMVLAT DRGEGWDGHV NVFNVLRMAT MQEPASLTAG NILRVVDNNS IYYFRGTSRE NTLQWCRAIN SARR
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