Gene CND02780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND02780 
Symbol 
ID3256894 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp754357 
End bp755453 
Gene Length1097 bp 
Protein Length237 aa 
Translation table 
GC content56% 
IMG OID638256212 
Product40s ribosomal protein s6-b, putative 
Protein accessionXP_570222 
Protein GI58266132 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2125] Ribosomal protein S6E (S10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTCAAGTCGT CCTTAAACAC CATGAAGGTC AACTTTTCCA ACCCCGCCAC CGGCGCCCAG 
AAACTCATCG ACTTCGAGGA TGAGCGCAAG ACGTGAGTAT ACAGCAGGAG ACATGCCGTA
GGACGACGAA CTACGAAGGA GCAGCGACAC ACGGCATGCG GAGGGGATGG GGCGGGCAAA
GCACGGCCGC TGACTTTTGT TTGCAGCCGA ATCTTCATGG AGAAGAGGAT GGGCCAGGAG
GTCGCTATCG ACTCTCTCGG AGAGGAGTTC GCTGGCTACG TCGTCCGTAT TACTGGCGGT
AACGACAAGC AGGGTTTCCC CATGAAGCAG GGTATGTCGT CGACGAATTT TATGGCGGCG
AGTGCCCGCT AATATACATG CAGGTGTCCT TCTCCAGCAC CGAACCAGGC TCCTCCTTTC
CGACGGCCAC TCTTGTTACC GAGCCCGTCG TGACGGTGAG AGGAAGAGGA AGTCTGTCCG
TGGCTGCATC GTCGGCAGCG ACATCGGTGT CCTCGCGGTC GCTATCGTCA AGCAGGGTGC
CAACGAGCTC CCCGGTCTTA CCGATGTCGT TCTCCCCAAG CGACTTGGCC CTAAGCGTGC
CACCAAGATC CGCAAGTTCT TCAACTTGTC CAAGGAGGAT GACGTTACCA AGTTCGTCGT
CCGACGAGAG GTTACCAAGA AGAACGGCAA GACCACCACC AAGGCCCCCA AGATCCAGGT
GAATAACTTT ATGTGATTTG CAATCTACAC CGCGATTTGC TGACAGTAGT GTAATAGCGT
CTTGTCACCC CCTTGCGTCT CCAGAGGAAG CGACACCTCC GATCTCTCAA GAAGAGGAGG
ACTGAGGCTC AGAAGGAGAC CGTTGCCGAG TACAACGCTG CTGTCGCCAA GCACGCCGAG
GAGAAGAAGG TTCACAACGC CGCCGTCAAG GCCGCCAAGA AGGCCCGCAG GTACGTGTCG
TGATGGCTAT GTGGAGGCAA TCTGACAGTT TGTACAGGTC CGCCTAAGCG AGTCGTCGAG
GATGTGTCTG GGGTTGGAGA TGTTTCTTTC ACGCTTGTCG GTACTCTCAT GCCGATGTAT
TTCATGAGAA CTCCAGG
 
Protein sequence
MKVNFSNPAT GAQKLIDFED ERKTRIFMEK RMGQEVAIDS LGEEFAGYVV RITGGNDKQG 
FPMKQGVLLQ HRTRLLLSDG HSCYRARRDG ERKRKSVRGC IVGSDIGVLA VAIVKQGANE
LPGLTDVVLP KRLGPKRATK IRKFFNLSKE DDVTKFVVRR EVTKKNGKTT TKAPKIQRLV
TPLRLQRKRH LRSLKKRRTE AQKETVAEYN AAVAKHAEEK KVHNAAVKAA KKARRSA