Gene CND02230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND02230 
Symbol 
ID3257416 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp592574 
End bp594068 
Gene Length1495 bp 
Protein Length331 aa 
Translation table 
GC content50% 
IMG OID638256157 
Productconserved hypothetical protein 
Protein accessionXP_570430 
Protein GI58266548 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTTAATTTAA GTCTCCTAAG AACAGAAGTC GCAGATATGG CCAGCTCGGA AGTGCTTCAC 
CCCAAAGCCG TGGCAGTAAT AACGGGTGCT GCGTACGTCT TATTCTCGCA TACTTCCGTT
CTTGCGCAAC GGCGAGAGGG ATTCACGAAC CACATCTGAA ACATCCGAAG GCTGATCCAG
TCAATGATAG CTCAGGTATC GGTTTGGCTG CTGCCCTTCG TTATGCCAAA GAAGGAGCGT
CAATTGTTCT TGTAGATATT GATCCAGCCG CTCTTGACCC GGCGGTGGAA AAGGTAAAGA
GCGTAGAAGG TGTTGGCACC GTGTTTGGTG TAAGAGTTGA CGTGGGAAAC GTTAAAGAAG
TGGCCAGCCT GCGGGATCGG GTTTTGGAGG AGTTTGGCGA GGTGAGTTGG GTAATGTCGC
GGGCTCCAAA ACTTCAATCG GTTGCCGCAG GAACGTGTGG GATGACTAAT ACCATAATGA
TAGGTCCACA TTCTTATGGC CAACGCTGGG ACTTCTACTA AGGCTCCTAC ATTCTCTTTG
GGCACACCCT TGGAGGAGCT TCAATCGCAC TGGAACAAAG TTCTCAATAC CAACTTCTTC
GGTGTTTTAA ACACCGCTCA GGCTTTCGCT CCGTTTATGG TAAAGCAAGA AAATTCAAGT
GTTATCATTA TCACTGGGAG CAAACAGGGC ATCACTTGTC CTCCGTGAGT GCTCGATACG
GCAAAAAATG AGTCCTTGCT GAAGGTATGA CAGTGGCAAC GCGGGCTACA ACGTTTCCAA
AGCGGCTGTC AAGACCTATG CCGAACAGCG TAAGTAAAAG CAGCATATAA AATGAGCTGT
TGGCAGGCTC ACTATTCTCT AGTCTCTCAT GAGTTGCGCT CAGATCCCGA TAGTCGCTGC
ACTGCCCATC TCTTCATCCC TGGCTGGGTC TTCACTAGTC TTACGGGCGC CAACAACATC
GGGGCCACGA AACCACCTGG CGCTTGGACA CCAGAGCAAA CCGTAGACTA CATGGTTGAT
AAAGTGTTTG GAGAGGGAGA TTTCTATGTT ATTTGCCCTG ATAACGAAAC CCCTACTGTG
AGTTGGATCT GGAGGTGATG GATAAGCCTG ATCAAGGGAG TAGTCTTTGG ACAAGGCAAG
AATCCAGTGG AGCATGGACG ATGTCATTCA GAACCGACCT GCTCTATCTA GGTGGCATCC
TAGCTGTGAG TACTGTGATT CAAAGACCGT CTTGGAAGGC GCTCATAGCT CCATGTCATA
ACAGATAAGG CTCGCTTCGA AGATTTTATT CAATCGAAAC AGGGTCTGGC GGCTCGAAGC
CGCAGCCGTG GTCGGCCTGC ACAACGCGAT GGCTCTCAGG TACCATCAGT GGTATCTATC
CCTTCTGAGA CTGACTTGTT GGCTTTCCGC CGTAATTGAG TCAACTACTG CTCAGATTAT
CATGACATAT CGTTTGGGGA GCCTCTAGTC AGACATGCAT AGGATTATGT AGGCC
 
Protein sequence
MASSEVLHPK AVAVITGAAS GIGLAAALRY AKEGASIVLV DIDPAALDPA VEKVKSVEGV 
GTVFGVRVDV GNVKEVASLR DRVLEEFGEV HILMANAGTS TKAPTFSLGT PLEELQSHWN
KVLNTNFFGV LNTAQAFAPF MVKQENSSVI IITGSKQGIT CPPGNAGYNV SKAAVKTYAE
QLSHELRSDP DSRCTAHLFI PGWVFTSLTG ANNIGATKPP GAWTPEQTVD YMVDKVFGEG
DFYVICPDNE TPTSLDKARI QWSMDDVIQN RPALSRWHPS YKARFEDFIQ SKQGLAARSR
SRGRPAQRDG SQVPSVVSIP SETDLLAFRR N