| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND01700 |
|---|
| Symbol | |
|---|
| ID | 3257370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006686 |
|---|
| Strand | + |
|---|
| Start bp | 456692 |
|---|
| End bp | 461921 |
|---|
| Gene Length | 5230 bp |
|---|
| Protein Length | 1496 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 638256105 |
|---|
| Product | translation repressor, putative |
|---|
| Protein accession | XP_570650 |
|---|
| Protein GI | 58266988 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTCGGAGGCC ATCTACCATA TACATAGACC ATAAGACCGA CTCTTTCAGC AACTACCACG
AGACGGCCAT GGCTACGAAG AATGCCCTCA AGTCTATCAA GGCTCACTTA GGAGAAAAGA
ACTCCGAATC CGCTCTCTAT GAGGCCACCG AACTTCTCAA GTCCATCGGC CCAGACTCAC
CAGAAGCTGA TCAGGTGTAA GCCAGCTCAC CATGGAAATA TGTTCGGAGC TGACTCGTCA
AGTCTGGTCT TTCGAGGGCT CGCCCTCACT CAACTTCAAA GGCTGGACGA AGCGGAAAAG
GTGAGTACAG CTCGTCTTCA GATCACAAAA GGCAGACTGA TCAGAGGCAA CAGTCATATC
TTCATGCTTA TAAATTGAAT CCCAACAATC CTCTCGCATC CGTTGGGCTA CGGCGGCTGT
ACCACAAAAA CCAAAGTTGG GAAAAGCTTG CGACTTTCTT AGAGGTGCAA GTGCAAACGA
CGTTTGAGAA GTAGGTAAAC CTTTGCGACA CCCAGCTAGT TCTGACAGTC ATCACAGACA
GGATGACGAA AAGCTTGCAG AGGTTCTTAA AGAATTATTA GAGGTCAGAG AGCAACATGG
GCCTGAGGAA AAAGTGCAGG CATATCTTTT CCATTTGTGC AGATCACTGC TTACAACCAC
ATAGCTTTAT CGGACTCTTG ATCTTCTTCT CCCTTCATCG CCTGTAGCGG GGCTTTTGCA
GTCAGTGACG CCACCCCAAG GGACTTACAT TCCTCTAGCC ATCCCTGTCT ACCCATCAGC
ATCTGACATC CTGCCGACTC TTCCTTCCCC TCTTCCCCAC CCTGTTCACC TTGCTGGATC
TCTTTCTCTC GCATTGGTAT CCCTGATCCG CTCGGAAATT GAGATTAAAC AGAAGATCGA
TGCACGGGTT AATAATGAGC GCAAGCGCCT AGGTGCTGGA ACAGAGAAGG ATGTCAGGAG
GAAAGTCGAC AGAGAAATAC TCGGAACAGA AGGCATGAGG CTGGTCGATC TCTGGAAAGA
GATTGCAGGT CATCCACAAG TGGAAGAGGA GATTCGAAGA GAGGTTGAAA TTCGGGAATT
CGAATTTTGG AGGAGACTCG TCGCTGCTCT TCCGTATGTC ATTATTCGTT GACTGGGCAA
TGGAGGCTCA TACTCTGTGC AGTGTCGAAA ATAAAATAGC TTCCAAAGAG TCTGCTGGTA
AAGCCTCACA AGCTGAGATG CCGGCCAACG CCTCCAACGA ACTTGTTGAG CCGGCGCTCT
TCAAAGCCAA ACAATATGTA GCTCCGAATC GCACAGAAGC TCTCTCTCAT GTCAATGCGC
TCGCCGATGG CTTCGTCCTA CTCGATATCT CGGCCAAGGG CGCCGAGGAG GGCTGGCGAT
GGGTGTTAGA GGGCAAAGAT GAGCCTACTT TGTGTATGTG TTTTCTCTAT CATATATCAA
ATTGTACTAA TTGTCCTTTA GTCTATGATA TTGATTTGCT TCACAAGTAT TCTGAAGCGT
TTCCCAACTC TCCTATGGCA TGCTTTATAG AAGAATACTG CCGGTGGTTC AAACGTCCTT
TGCCGGAAAC GGAGGAAGAT TCTTCAAAAA CAGAAGCATA CGAAAGAGAC GAGAAAGCCG
AGGGTTCTGT AAAGCACCGG AAGAGTCACA AGGGCGGGCG AGGTGCTTTA ACAAAGAGAC
AATCTCGTCG AGCCCATCTG CGGGAAATCC ATGTGTCAGA GGACGTTGAA AAGGAGGAAA
GAGAGGAGCT GTTCTCGTCG ATGACTGTTA GTCTCCATTC TGTGTAATTC AAGTACTGAC
GGGAATTTCA GAAACTTGTC GACCAACTTC CGATGTCCAT TTTTGCCCAT AGGGTGATGG
CGAGAATCGC GCTTGAAGAT GAAGATTGGT CCAGCGCGAT AAGCTTTGCT GAGAAGGCCC
GCAAGCTTCT TACCGGACTG GAAGCTGAGA GAGGTATCAC TCTTTCCAAG TAAGTACATG
ATTAACTAAC GTTATATGTC ACTAACACAT TCTTTAGCGT TCGCGCAGAC CTCGATACAG
TTCTGGGCGT AGCCCTCGTC CCGCATTACC CTCCCAAACA CCATGTCCGT GCAGCGCGCA
TCCTTGAGAC AGTGCTCAAA ATCCATCCGA CCAATAATGA GGCCCGTTTT GCCCGTGCAC
AAATTTACGA AACTGCCGGC CAATGGTCTG ATGCTCGTCA TCATTTCGAA AAAATTGTCC
AAGATGGCGG GAGCGAAAAG GAAAGGTTGG ATTCAAAGGA AGAAGTCGGC TGGTGTTTGG
CCAACGAAGG AAAGCTCGAG GAAGGGAGAG ATATATTGGA GGAGGTCATA GAAGTCAGAG
ACACCAAGAC AGAAAAAGAA AAAGAGGCAG AAGCAAGGGA GAGGGGGAGG ACTTGGTGGA
GATTGGGCAG GACTGAGTGG ATGATCGGAG GTGAGTCTTG GGGTCCTCGA AAGACTATCC
AATCGAAGTT AACAAGATGA TTGCCTTTTT AGATGAGGAA AGTAAGCAAC ATGCCGAAGA
ATGGTTTATG GCATCTGTCC GTGCACACCC AGACTTTGCG GCGTCTTACA CTTCCCTTGG
AGTCTGTTAC TCATCCGCAA CCCCTCCCGA TAACGAGCGT GCCCTCAAAT GCTTTCAACG
AGCTTTCGAG CTTGACGCCA CAGAAACTGA TGCCGCTTAT CGACTGGCAA ATGGATACGC
CGATGAAGAT GAGTGGGCAA GGGTGAGGAC GATCGCCGTG CGTGTGATGG AAGGCGAAGG
GGGTCTGGAG GGTGTGGCGG GCGGGGACGT ATTGAACGCT AAAGGAAGAT TTGCTCCGCA
AAATGGTTGG GCTTGGAAAG CACTCGGCTC TTCCGAGATG CATTATAAAA AATATGCTGA
GGCCGCCGCC GCCTATCAGA TCGCTCTTCG TGCCGATGAT CAGGATGTAT CCACGTGGAT
TATGTTAGGC GAGAGTTACG TCAAGTGCGG GCGACACATG GCAGGACTCA AGACATTTGA
CCATGCCCTA ACCCTCGATC CCGACAACTG GCGCGCTCTC TACAATATCG GTCAAACTCA
AAGCCAGCTC GGCGCTTTCG ACAAAGCCAT TGAAGCCTAT CAGAAAGTCT TGGAAATCAC
CCAGGATGAG GATGTTGGTG TAATTGCGGC TTTGGCGGAG GCGAACCTTT CTCTCGGACG
ACAGACCGGA ACGGGAGGCT TTAGAGAAAG GTCAAGAGGA GCATTCCATC GAGCGATCGA
GTTGGCTATG AAGGTGCTCA AGTCAGGAAA GGCTCACAAG GCATGGGGAT GGAAGCTTAT
TGGCGACGCT ACCTATGAAT TGAGCGGACA AGAATCAAAT ATTGAGGAGG CGCAGGATTC
GTTTACGGTT GTACAACCGG TGCTGATTTT CCTTGTTGAA GATGACACCG ATCGTCGGTC
AACAACACCA GGTGTCGGCC ATGCAGCAAA TCTCCTTCAA GATGTTGTCT CCACCACCAC
TTCTCTCCGG GCTTCGATCT TCGCTTTCGC GTATCGTGCC CATATTCTCA AGAACGAGCC
CCGTGTTATC GATCCAGCAT TGTATGACTA TGCCAGCGCC TTGCATACAT TGGCTGGCAA
ACTTATCGAA AGCGATGAGA GGAAGCAATG TCTTAAGACC GCTATCAGCG CTGTAAGGGC
AGCTTTGGAT AGGAACGCAG GCGATGAAAG GCTTTGGAAT GCTTTGGGTG TGATTTGTGC
GACTGCTGGC CCACAAGTTG CTCAACACGC TTTTGTAGTG TCTCTCGAGC TCTACAGCAA
GGATCCAGTT GTTTGGGTCA ACTTGGGATA CTTGTATCTG CATTTGGATG ATCTCGATCT
CGCCAATCAA TGTTTCCTCA AGGCTCAAAT CATTGATCCC GATTCTGCGA GGGCTTGGTA
TGGACAAGGC CTGTTAGCTG ACCGACATGG TGATAAAGAG CATGCCAAGG CACTCTTTTC
ACACTCAGTG ACACTCTCAG CCCAATCCCT TCTAGAAGCG GACCTTGCTC TTGCAGCGGC
GACTTTCGCC CAATTCTTCC GCCCCAACGC TTCTGTTGAT TCTAGTCTTC TTCATCAACC
CGCGTTTGCC CTCAAGCATT ACTGTCATCA GCGCCCGCGC GATTCCACTG CTGCTCATCT
CTATGCTCTC ATATGCGAGC GATTGGGTCT TGTCGAGGAA GCAGCGTTGT CACTTGAAAA
TGCCGCTGCT GTGTTGGAAG AGGAATTTGA GCGAGTTGAA TCGGGGGAAA TTGAAAACCT
TTATTCTGTT GCCCTTTGCA ACCTCGGTCG AGTTCGCCTT TCTGCTGGCG TGTACTTAGA
ATCTCTTGAT GCGCTCAACA ACTGCTGGGA GCTCATTGCG TCTTCATCTG AACCGAGTGC
AGTTTCTCTA AAGCCGCAAT GCAAGCTCCT GCAAGGTTTG GCATTCTACT GGCTTGGACA
GATTGATGAA AGCCTGGAGG CATTCCAAGC AAGTTTAGAC GCAGCGACAC AGAATCAGGA
CTACGATGTC AAGGAGAAGG TGGCAGTGCT CCTGAGTAGA ACGTTGTGGG GGTTGGGAGG
GAATGATGCG AAGGAGACAG CAAAAAGTAA CCTCATGGAA TGGTATGTAA TTGCCGGTCT
GCATATAGTG AAATCGATAT ACTTATCTCG TTATTACAGT TTGGCTCGAG AAAGACCATC
TCTTGGAGTT ATCTCTACTC TGGCGGCCAT TGCGCTCGTA TCCTCCGACG CAGATCTTAC
TAATGCTGCT GTCTCCGAGC TCCTTACTCG ACCTATCGCG GAGAGAGTAC AAGATCCTTC
TGGACAGGCC AATCTCGTGC TCTATCTACA AGCTATCTCT GAGGGTCGAG AGGAAGACGC
CTACAATACA TTACAGTCCG CTTCTCAGGC CGCACCAGCA TCTCGAAGCA TACGGAACCG
CCTTGTAGAA GCCCTCATCA AGGCTGGCAA ATCAAAGGAA GCGCTTGATG TTCTCGCTGT
TAAAAATGTT AAGGAAGGAA CTGCTGAAGT CAAAGCCAAG GAGGAAAGAT TGCTTGGCAT
AGGAGAGTTG ATGGAAGGAG ATGCGAAGGG GATGAAAGGA GTAGTCAGGA GCGTAATGCT
TGCACCTTGG GAAGATGAGA GCTGGCAGGC TTTGGCGTGG GGAAAGAAAG TGGTTGAAGA
GGCGGGCTTG ATTGAGACCA AAGATGGGGC GAAAGATGAC GCCGCGACTA AATTAGATCT
TACAGAATGA
|
|---|
| Protein sequence | MATKNALKSI KAHLGEKNSE SALYEATELL KSIGPDSPEA DQVLVFRGLA LTQLQRLDEA
EKSYLHAYKL NPNNPLASLY RTLDLLLPSS PVAGLLQSVT PPQGTYIPLA IPVYPSASDI
LPTLPSPLPH PVHLAGSLSL ALVSLIRSEI EIKQKIDARV NNERKRLGAG TEKDVRRKVD
REILGTEGMR LVDLWKEIAG HPQVEEEIRR EVEIREFEFW RRLVAALPVE NKIASKESAG
KASQAEMPAN ASNELVEPAL FKAKQYVAPN RTEALSHVNA LADGFVLLDI SAKGAEEGWR
WVLEGKDEPT LFYDIDLLHK YSEAFPNSPM ACFIEEYCRW FKRPLPETEE DSSKTEAYER
DEKAEGSVKH RKSHKGGRGA LTKRQSRRAH LREIHVSEDV EKEEREELFS SMTKLVDQLP
MSIFAHRVMA RIALEDEDWS SAISFAEKAR KLLTGLEAER GITLSNVRAD LDTVLGVALV
PHYPPKHHVR AARILETVLK IHPTNNEARF ARAQIYETAG QWSDARHHFE KIVQDGGSEK
ERLDSKEEVG WCLANEGKLE EGRDILEEVI EVRDTKTEKE KEAEARERGR TWWRLGRTEW
MIGDEESKQH AEEWFMASVR AHPDFAASYT SLGVCYSSAT PPDNERALKC FQRAFELDAT
ETDAAYRLAN GYADEDEWAR VRTIAVRVME GEGGLEGVAG GDVLNAKGRF APQNGWAWKA
LGSSEMHYKK YAEAAAAYQI ALRADDQDVS TWIMLGESYV KCGRHMAGLK TFDHALTLDP
DNWRALYNIG QTQSQLGAFD KAIEAYQKVL EITQDEDVGV IAALAEANLS LGRQTGTGGF
RERSRGAFHR AIELAMKVLK SGKAHKAWGW KLIGDATYEL SGQESNIEEA QDSFTVVQPV
LIFLVEDDTD RRSTTPGVGH AANLLQDVVS TTTSLRASIF AFAYRAHILK NEPRVIDPAL
YDYASALHTL AGKLIESDER KQCLKTAISA VRAALDRNAG DERLWNALGV ICATAGPQVA
QHAFVVSLEL YSKDPVVWVN LGYLYLHLDD LDLANQCFLK AQIIDPDSAR AWYGQGLLAD
RHGDKEHAKA LFSHSVTLSA QSLLEADLAL AAATFAQFFR PNASVDSSLL HQPAFALKHY
CHQRPRDSTA AHLYALICER LGLVEEAALS LENAAAVLEE EFERVESGEI ENLYSVALCN
LGRVRLSAGV YLESLDALNN CWELIASSSE PSAVSLKPQC KLLQGLAFYW LGQIDESLEA
FQASLDAATQ NQDYDVKEKV AVLLSRTLWG LGGNDAKETA KSNLMECLAR ERPSLGVIST
LAAIALVSSD ADLTNAAVSE LLTRPIAERV QDPSGQANLV LYLQAISEGR EEDAYNTLQS
ASQAAPASRS IRNRLVEALI KAGKSKEALD VLAVKNVKEG TAEVKAKEER LLGIGELMEG
DAKGMKGVVR SVMLAPWEDE SWQALAWGKK VVEEAGLIET KDGAKDDAAT KLDLTE
|
|---|
| |