Gene CND01470 details

Gene Information

• Locus tag: CND01470
• ID: 3257018
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006686
• Strand: +
• Start bp: 407516
• End bp: 413982
• Gene Length: 6467 bp
• Protein Length: 1586 aa
• GC content: 47%
• IMG OID: 638256082
• Product: hypothetical protein
• Protein accession: XP_570287
• Protein GI: 58266262
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG0553] Superfamily II DNA/RNA helicases, SNF2 family

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGCCGTTCCT CATTGCTCAT CCATCTCTTT CTCCCTATTT TCCCCCGTGC TCACTCATTG 
CCCATCTGGC ATTCTATCAT CCGGCCACAT CGACGTGCTA TCTAGCTGAG GCTGGCCCAA 
AATCCTTACC CAAGCTAGCC GACCGCTCTT CAACAGTCAT GTCCGATGTC TGGCCCGCCA 
CCAGCTCGTA CATGCTAGAG CTCGATCACC GGAAGTATGA CTTGAGCCAG CTAGCTAAGG 
CAGTGGACAT TGCTGCCAAG GACAGAGATC AATCAGGGGA TGAATATGGT GAGTACTTAC 
GTTGAATGTC TCGAGTATTA ATCAATTGAC ACCACCATGG TCATAGCCGT TGCCCTTCCT 
ACACCCACGT GTTTTCATGT GCATACAAAC ACCGTCGAGG CCACCCTGCT ACCACCAGAT 
GCCAAAATCG AGTATTACGG GAGGGAACCT GAATCGAACC CTGCTTGGGA AATCTTCCAA 
ACTATCGGGG AGCAGGTTGC GTCTGTTGTT CCATCTATGG AACGCATGCC GCTTGTGCCT 
TCGACCGCCA AACTTATACG CCAACCTCCC AACCCCGGAA ACACAACCAG CTCGGCTGTT 
GGAGCCTGCC TCTATCTTCC TAAGCACGGC GACCGCTATC CTTTAGCCAG GCTTGAACTT 
CCGCCCATTG CTGAGCAAAA GGAATGGATG CCTTCAGCTA CTGCTTGGGA TATGCAGCAC 
TGGATACACA CGATTATTGC CCTTGACCCA GAGGCTAATA CTACCCGAAA GGCTATCTAT 
CGGGACGATA AGAAACGTGT TCACATGCAG ACTGCAATTG ACATATGTTG GGTCCCCGAT 
GAAGGAGGTG AAGCGGACAG GGCAGAGATT AAACTGCTTG TTGTTTCTCG TATCTATTTG 
GACATATCAT TCCTCTTCGA CCCTCTTCCT GAAATCGGCA ACGACATGCT CGGTTTCATT 
CTTCACTCCA TCATTCCTTC ACCTACTGCT ACTACGTATG CATCCGAGTC GGAAGCTCGT 
GCTGCAGGTC TTCGCAACTT CTACACATGT CTAAAGCCAG CTCCTGACCT TCCATTCAAC 
TTTCCTGCCA GCCGGCTACA ACCAAGAGAG ATGCTCTCAA AACTTTTGCC TTTTCAGGTA 
CGAACTGTGA GATTACTCTT GGAACGGGAA GGAGCTCAGG GAGTCGGTAA GGCGGCGATC 
AGGACCAAAA TGGATCCGGA TGGGTTATGG AAAGGGTTAG ACTGGGGAAA CAATCTTGGT 
AAATTGGGGT ATCGAAGAAT TACTGGAAGT ATGGTTCCAA TCGATTCTTT AAAATCGGTC 
AATACCGATA TCGAAGGGAA AGGGAAACAA AAAGCATATG AAGAGGAGGA AGACTATCAC 
TATGTGTCAG GCATAACTGA GGAGGAAAGA CAAAGATTGC CTACTTTGCT GGATCTGACT 
GGTGTACGTG GTACAATGCT TTGTGAAGAA ATGGGTAAGT TGCAAACAGT ACTGGTACAT 
ACTCCATCGC TTACTTTAGT TCAGGTCTTG GTAAGACTGT CGAGGCTATT GCATTGCTTT 
CCTTACACAG ACACCCCCTC TCTACCCCTC GCAATATACC TTCGATGGCT CCTTTAGTTT 
CGACTGGAAC TTCTCAGTCT AGCGCACATG CTCGCATTGC CAAGCAGCCA GTGCCTGTTA 
TCAATTTGTT GGCAGGCATT CCTGGACTCC AAGATTTGGA AGTAAAAGAT TGGGTTGAGA 
AGGAGAATAT TGCCTTTGCT GGATGCCGGG CGTGGGACGA GCATTCCCAA CTGGAAGTTA 
CCGAAGTTGC GGTGAGTTAC ATCGTGTCGT GCTACCCGTC CATGAATTAT AAACTGACCT 
TGATCTCAGG CAACTCTTAT CGTAACGCCT CCCTCCCTTC TAAAACAGTG GGTCGCAGAA 
ATTCAACGGC ATGCTCCCAC AATCCGTGTA TGTGTATATG AGGGCTGGAA GTCCTTGCAA 
CAGGGCGTAG AGAAACAACG TGATGCGCGT CGCAAGGCGC GTGCTCGCAA AGAGCTGGAA 
GAGAAAAAGC GTAAAGCTGC TGCATTCAGA GGTCAGACAA GGAGAAAGTA TGCCAAGGGT 
AATAACGGGC TTGCCATCAA AGAGGAGAGT GATGAAGAGA ATGATCAGGA TGATGAGGAG 
GAGGGAACAT TGCAACTGAC TCAGAGGCAA TTCGTAGACT ATGTGAGGGC ACATGACGTT 
GTCGTTACTA CCTACCAGTG AGTGATCTAG GAGCTCTCGG TGTAGTTTTC TATGCTGATG 
CTTTTGGTCC AGCGACCGTA AGTCTGTGTC ATGTCGACGA TGTTGCAACT CTTTGATACC 
TAACGACAAC CAGTCTCTCA AGACCTGAAG TTTGCATTAC CAGTTCCAGC AAGAAGTCGT 
AGGTCTACTG CTAACTACCA ATTGAACGAC CGTCCCCGAA GTCCTCTCGT CATGGTAGAG 
TAAGTGGTCT AAAATGGGCG ACATTGCATA ATCTCTGACT GCTCGCAGAT GGTGGCGAGT 
AATCATGGAT GAAGTTCAAT TACATGGTGA CCAAACGGAC GCAGCGTGAG TTCGATGTCT 
ATTAGGCCAA TTTTTGGCAC GTAGGCTGAA GAAGAAGGCA GTAATATGGT CTCTCTAATC 
CCGAGGAAAA ACTCTCTAGC AGTTTCTGGT ACACCTGCCC GATCGGATAT CAAAGACCTA 
ATGGGTTCGC TGAAATTCTT GCGCGTGCCT GTTCTTCCAA ATGATAATCG TCTATGGCAT 
CGCCTGCAAC AGCCCTCTAT GCGACCTGCC TTTGAGGGTC TTTTCCGCAG TCTCGCGGTA 
CGAACCACAA AGAAGGAAGT ATCTGGCGAG TTCAACTTGC CTCACCAATC CCGATATGTT 
GTACCCATCG AACTTTCAGA GATTGAATTA CATTATTACA ATGACACTCT CGAAAGAGCT 
CGTGAAAGGC TCCACCTTCC TGCCAATTTC CGAGAAGCTC GCCCAGACGA CTGGGTTTTG 
GATAGAAGTA TGTTCCAAAC CGTTCTTCGG AGTCTACGTC AGATCTGTAC ACACATCCAG 
GTGGGGCAGA TGCAGTCCGG CACCGGGCGC GGAGACCAGA GGCTGAGATT GGGACGGACT 
TTGATGACAA TGTCGGAGGC CCTGGAGAAA ATGCGGGATG ACCACTTACA AGAGACCTCC 
TCCGAGGCTC GACAGCAGGT GCGTATGAAA TAAAGGGACT ACGCGAATAG CTAATGCTAT 
TACAGATGCG AATGATGATT CGTCAAGCTC AACTTACAGT GATGGATGAC CAGAACGATT 
TGCGTCATCT TCAAGCCTTA GCAGTGAGTC ATCTCTGGTG AGAATTTTAG CTAATTTTCC 
TAGCTCTATG AACGAGCTCG AGCTGCTGCA GAAAGCCACT TGGAACCTGC TCAGAAGCGT 
CTAAAATCAT TACTGGATGA GAATGATGGA AATGACGAGG AAGAAGACGA GGAATTTGAG 
GATGAGATGT CAGAAAAACA ACAGACTCAA CAAGAAAAAG CGAGAGCCCT TGCCATCAAA 
ACAGTCAAAC ACACGTGAGT CACCATTTCC ATGGATATTT AGCTGATCAG AAAGTATCCG 
TGAACTCGAC CTTATCATCC ATCAATGTTG GTTCTTTGAG GGTGATGTGC GGCATGTACA 
GAAGGACGAG GAAAAAGAAG GTAAAGGACT CAATCGTTTC ATGTTAGGAC CGCACCAACA 
TACTGATGGT CACCGTAGTT TACGCATACG CCCGTGCAGA TGCCATTAGA AAGAGTATCC 
TTGCTCGACC GCTAAAGACT GCCAATATGT CGGTTGACCT TTTAAAGGGT TCTTTAACTC 
GTGGCCCGGC AGTAGTTCAG GTGAATGAGC TACAGACTAC GGATTTAAAG AGAAAAGGTG 
GTATCTTGAC GCACGATGTT ATATCGCAAG CCAATGCGTT GCTCAGAATT ATGAACGATA 
AGTCAGTATT GGATATGTGA ATGACAGCCA AGTTGCTAAA ACCTGGATGA CAGTGCCTTA 
CTGGTTTTCA ATTGGCGTAC TAAGATCGTC GACCTTTTGT CTTCGCCAAT TGATGTCGAC 
CCGACGGATG TACCCGATGG TCAAGGTCAA GAAGTCGAGA ATCCTGAAGC CGAATACTAT 
GCCGAGGCAT TGAAAGCTCA GGGAGAAGGT AAGTCGGGTT CGAAAACCTT GATGGGTTTC 
AGTCAGCTGA AGATAAATAG TGGAAGCATA TCTTATTGCA TTCGCCGCAG CTGTTGCTGA 
TCGCAGAGGT GTGCAATCTA CCGATCGGCC TCGACTTCGT ATAAGCTGAC TGAGCGAACA 
GAATTCATGA CTGAGACAAG AAGTTTACTC TCTACTCATG ATTCTCGAAT CGCAAAGCAG 
GTTAGTTCAG AGGCCTCAAA AAAAGTGTAG CCGTTTTAAC TGAGTACTTT GCAGCGAAAC 
ACTAAAGCTG CCATGAATGC CCTCACCGAT GTCGAAATGC CGAATGTGCC TGATGATATC 
GGTGAACAGG CGACAGTTCT TCTCAAAGAA CGTCAGGTTT TCCGAGATGC TCGCATGAAC 
GAAGGTTGCG AAAGGCCTCT CAAGGGTCTG CTGATGGACC TCAATGGTGC GTTTATATTA 
TCTTGCTTTC GCTGACCAAG TAGCTATCAT ACATGGCCAA CATAGACATG AAGAGATAGA 
AATTGCGAAG AGCATGGCTT CTATGCTCAA AAAATATATC GCTGAACAAA GTACGCCCTA 
TAAGCCTTTT CAGTGTGACC TTTCTCTAAT TATGGTATTA GCTGAGCTCG TCGAAAAGCT 
TAACAAGGAA TTAGACATGT TCCGAGCAAC TTTCAACCGC CGTGTTGTTT ACTTTGCCTC 
TCTACAGGAG ATCTCCGACT CTGTGATTTC TTTTCGTCAT GTTTTCTTAT CGCGTTTTCT 
TACGCCCAAA TAGGTTACTG CACCCGAGTT CAAAGACTTA GGCAAGGATA TACACGCTGC 
TGCGAAAGAA GTAAATGAGC TCGAGGTGAA ATTGGCCAAA ATGGCTGTGA AAGGTCGATA 
TCTTCATTAT CTTGGCACAA AACAGCACGA GGAAGAAGAC ATCAGAGAGG ACTGCATCAT 
CTGCTTCGGT TCATCCGATG ATAACCAGGC CGTTCTGCTC CAATGTGGCC ATTACTTCTG 
CTTGGTGCGT TATACTTTCA CATTCCGAGA AGTGGCGCTA AATGCTTGGT CAGTCGTGCT 
ACCGAGAGTA TCGAAAGACT CCGGGAGGGA GGAAATGCCC ATCATGCCGA ATAAAAAGTG 
AGTGGCATAC TGAACAATCA GGAGATTGTA ATCTAACTAT GGGGCGATAG TCAGCGACAA 
AGAGATTCAG CGCATCAAAC TCAACCCTGC AAGAGCGGAA GCGGCGGATC CAATGGGCAA 
GCAACATCAG GAGTTTTCAG TACAGACACT CGCCCCTGCT GTCTCTGGCT CGAATGAGGC 
AGAGGAGGAT ACAACGCCAG AGGAACAGGA GCAGTTGAGA AGGGCTGCAG ATCTTGAAAG 
GCTACGAATG ATGGATGTAG AAAGAAGGAG GGCCGTCATG ATGATGGATA TGATGGGTGA 
ATACGGTTCC AAGGTAGGTG CCACTGTCTT TTCCATGGAA AGAAAAGCAA CTAAGGCCCA 
GTAGATTAAC TTCTTAATCA AGCACCTTTT GTACTACAAA TCCACGGAAC CTGATAGTAT 
GTTATCTATC GGTCTGCCTT CCACAAGGTT TTGCTGACAC TTAGGAATAG CGCGACATGT 
CATCTTCTCT AACTGGTCTG ACTCTCTCAA CAGTATGCTT ATAACTATTA TTTTGAAGCA 
TAGACATGCT GATCATCCGC CGCTGTAGTC GTTATGCAGG CTCTTCGACT CAATGGCATC 
TCATTTGCTT CTTTTGACCA GGGCAAAAAG CAAAAGGATG TTGTCGATCA GTTTCTCAGA 
GACGAGAGCA TATCCGTGTT TTTGCTTCAT GCCGAACGAG AAAGGTACGT GATGTTTTCG 
ATGAACAAGC AAAGCTGACA TTGTCTTCAT ATTGTAGCTC TGGCTTGACT TTGACAAGCT 
GTCATGTTGT TCATCTCCTT GAGCCGGTCT TAAGACACAG TTTTGAGTTA CAAGGTATAT 
CGTAATTATT GGACCGATTC GGCTTCTGAC TAACGTTTCC TGCAGCTATC GGACGCGTTG 
ATCGACTGGG CCAAGAAAAG GAAACTTCTG TATTCTGGTA CGCTATTTTT TGCCGATGTC 
TGGAATAAAA TCATTGACCG TATTTCTCTC ACAGTTATGC TACAATGGAC ACTGTAGAAT 
CTCGCATTCT TTCTCAAGGT GTACGAAATG GAACGTCTAT ATACCTTGCC GACGACACTG 
CGGATCAAGT GGTGGCTGAG ATGCCGAATG TCGCAAGTGC AGCGCATAAG GGAGGAGATG 
TTGCTGCTGG TGGTAACGAA GAAGACCTAT TAGGGTTGAT TCTTTAG 

 

Protein sequence

MSDVWPATSS YMLELDHRKY DLSQLAKAVD IAAKDRDQSG DEYAVALPTP TCFHVHTNTV 
EATLLPPDAK IEYYGREPES NPAWEIFQTI GEQVASVVPS MERMPLVPST AKLIRQPPNP 
GNTTSSAVGA CLYLPKHGDR YPLARLELPP IAEQKEWMPS ATAWDMQHWI HTIIALDPEA 
NTTRKAIYRD DKKRVHMQTA IDICWVPDEG GEADRAEIKL LVVSRIYLDI SFLFDPLPEI 
GNDMLGFILH SIIPSPTATT YASESEARAA GLRNFYTCLK PAPDLPFNFP ASRLQPREML 
SKLLPFQVRT VRLLLEREGA QGVGKAAIRT KMDPDGLWKG LDWGNNLGKL GYRRITGSMV 
PIDSLKSVNT DIEGKGKQKA YEEEEDYHYV SGITEEERQR LPTLLDLTGV RGTMLCEEMG 
LGKTVEAIAL LSLHRHPLST PRNIPSMAPL VSTGTSQSSA HARIAKQPVP VINLLAGIPG 
LQDLEVKDWV EKENIAFAGC RAWDEHSQLE VTEVAATLIV TPPSLLKQWV AEIQRHAPTI 
RVCVYEGWKS LQQGVEKQRD ARRKARARKE LEEKKRKAAA FRGQTRRKYA KGNNGLAIKE 
ESDEENDQDD EEEGTLQLTQ RQFVDYVRAH DVVVTTYHDH LKFALPVPAR SRRSTANYQL 
NDRPRSPLVM VEWWRVIMDE VQLHGDQTDA ANMVSLIPRK NSLAVSGTPA RSDIKDLMGS 
LKFLRVPVLP NDNRLWHRLQ QPSMRPAFEG LFRSLAVRTT KKEVSGEFNL PHQSRYVVPI 
ELSEIELHYY NDTLERARER LHLPANFREA RPDDWVLDRS MFQTVLRSLR QICTHIQVGQ 
MQSGTGRGDQ RLRLGRTLMT MSEALEKMRD DHLQETSSEA RQQMRMMIRQ AQLTVMDDQN 
DLRHLQALAL YERARAAAES HLEPAQKRLK SLLDENDGND EEEDEEFEDE MSEKQQTQQE 
KARALAIKTV KHTIRELDLI IHQCWFFEGD VRHVQKDEEK EVYAYARADA IRKSILARPL 
KTANIALLVF NWRTKIVDLL SSPIDVDPTD VPDGQGQEVE NPEAEYYAEA LKAQGEEFMT 
ETRSLLSTHD SRIAKQRNTK AAMNALTDVE MPNVPDDIGE QATVLLKERQ VFRDARMNEG 
CERPLKGLLM DLNVAIIHGQ HRHEEIEIAK SMASMLKKYI AEQTELVEKL NKELDMFRAT 
FNRRVVYFAS LQEISDSVTA PEFKDLGKDI HAAAKEVNEL EVKLAKMAVK GRYLHYLGTK 
QHEEEDIRED CIICFGSSDD NQAVLLQCGH YFCLSCYREY RKTPGGRKCP SCRIKISDKE 
IQRIKLNPAR AEAADPMGKQ HQEFSVQTLA PAVSGSNEAE EDTTPEEQEQ LRRAADLERL 
RMMDVERRRA VMMMDMMGEY GSKINFLIKH LLYYKSTEPD TRHVIFSNWS DSLNIVMQAL 
RLNGISFASF DQGKKQKDVV DQFLRDESIS VFLLHAERES SGLTLTSCHV VHLLEPVLRH 
SFELQAIGRV DRLGQEKETS VFCYATMDTV ESRILSQGVR NGTSIYLADD TADQVVAEMP 
NVASAAHKGG DVAAGGNEED LLGLIL