Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND01110 |
Symbol | |
ID | 3257353 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 325079 |
End bp | 329072 |
Gene Length | 3994 bp |
Protein Length | 1051 aa |
Translation table | |
GC content | 50% |
IMG OID | 638256047 |
Product | conserved hypothetical protein |
Protein accession | XP_570686 |
Protein GI | 58267060 |
COG category | [R] General function prediction only |
COG ID | [COG5210] GTPase-activating protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCCCCA GCGTACCGCC GCCACAGCGC CACCATTCGG GCGACGCGCA CCCCCTCGCC ACCCCGACCC GCCACTCCGC ACACCGCCCG CATGCAGCCA CAATCTCCAC GTCCCGCCCC GCAAACGCCC TCCTAGACAC ACCCCGCTCC TCCCGGCCCC CCCTGAATCG CAAGCCATCA GCCACAGCCA AGCCATGGGA CCATCTCGAA TCCCTAGCAA AGGACGAACT CTCCATAGTC GACACCAGGT TCGACCTCAT GTCCGACGAC GAACTGTATG AATACCTGCA ACATGTACCG GTTGCTCCTG AAGATCCAAC GCCTCACGTA GAACTCTCGG CTCCTGTTTT CCCTGCGAAT GAACGGACAA GTTCACCTGC AGGTCCATTA TACACGGCCC AACTACCTCC GTCAGGCGAT AAATCTCCTC TCTTTCCACC TTCGCCACCT TCACTGCAGA ATAATGCACA GATCACCGAC CATCCGCTGC GAGTGCTTAG CAGAGCAGTT AGAGAGTTGA GAGAGGTTAT TGAGAGGTTG GAAGACGAGA ATGCGAGGTT ACGTATGAAT CAGGTAGAGA GAAAGCCTGC ATCTGGCAGA GCGACAGATC AAGTGCGTGA GCAGCTCCTA CGTGCCAAGC AAGCCTGTAA CTGATTGTCA ACAGATATCA ATTCACGATG ATTTAAATGA GGCTATATCC ACGTCTCTCA CATCTACACC ATCCTTGCGT GAGATACCCT CAAGGACATC GGCACTGAAC ATTCCGCAAT CTGAACTACC TTCTTTATCG CCAACAACCT CCCGTTTCCC CGCAGGATTC TCTCCATCTT CCTCCAATTC AATACCTTTT ACGTCAACTC CAGTTGATCT GCCTCAACCT GATGCTGACG CAGCAAGTAT AAATGAAAAT CATGATAGGA AATCTTCCCG GCAATCTTGG ACATCTGGTC TCTGGGTTTG GGGTAATAAG AAAAACTCTG TGACGAAAAG GAGCAGTATG GGGTCTGTAG CGTCTGTCAA TCAGCCTGTA CCTCCCAGTC CCAACGCTAT ACCTAGATCA ACACCAGAGC ATGAAGACGA AGATGAGGCT TGGAGGAAAG GTGACGGTGG AAGCAGTCCT TCATACAGAG CAATCTTCCT CGCAACAGTG AGTGTGTCAG CGAGCAGTGC TGTACATGAT ATTGATTGTA TGAGAACAGC GCATACTTAC TCCGGACCCT TCTTCCATCC TTGTACCGAC AGAAACGCCG CCAAAACCTC TTATTGCCCA ACTTGCACAT TCCCTAGTCA GCAACGCGCG AGATGAAGGA ATTGTAGCCA AGGAAGCTGT GAATCGCCGC CGATCAAGGG ACCTTTCACG AAGTCGGGCC ATCTCTCTTG GAGGCCAAGA ACGTTCTCAA ACCGATGAGG CTAGGAATAA GGATAGTAAA GGCTACGGTG ATTCTGCTTT GACCGCTACG GCTTTACTGG GAAGATCATT GCTGTCATCC GTGACTGGTG CTACCATAAG AGGTTCCAGG AGCGGCGCAA GTGTCGTTAA CGAAGAGACC CGACCTTCTG TTTTGAGTAG AGGGTCGTCA GGGCATGGGT TTCCTGTGGC AGCAGCCCCG TCCTCACCAG CGATAAGTCA CTCTGCAGCA GTGGGAAGCC CTCTTTCCGA GGCAGCTCCG CTACCTTCTG TAGAGCTTTC TTCGATAGTA CCAGACGAGA GTAGGCCGCC GACAGTTTTG CTATCTCGCG AAAACCTTGG GTCGTTCTTC CAGTCAAATA GAGTCAATAG AGCCAAGATG GTGACCGCCA GTCGATTCGA GTCGGATAAG CCACCACTGA CTGATCGATA TGGCTTTATT TGTGGGTCGC AGGATACGAA CGGCACGGGA CATAAGCTGA CTGTTGCAAT AGATGACATT CAACATGCTA AAATGCTTAA AGATGCGTCA GTGGCGGGAA CCCCTGCTCC GATGTCTTTG AACGGCACAT TGTTCAAAAA TGACGACCCA GAAGAGGAAG GGTGGATTGC AAAGCATCGT CGAGGATCTC ACGGAAGTCA AAAGTCGGAT TCCAAAAGCA TTAAAAATAC TGGCGATGTG AGAGAAAATA GTCAGCTAGC ATCTCCACGC CCTTCAATCG ATTCAACGTC ATCAAGTACA CAAGCCCCGT CTCGATCAAG CGACACGCCC GAAAGTGTTG CTTCTCCGAA AACACGTTCA AGGTCATCTT CTCACGCAGA TCAGCATAGA CATCGGTCTA GTACCCTCCT CAGCCTCAAT CCGTCACCTG CTCGACCAGT TACAGGCAAG GACCACTTGA CAGTTTCCGC TCGCGGTTCA TCTAGTCTTC ATTCGGGCGT CTCACCTTCC ATTACTTCAA CCACAGCGCC TCAACCCATC TCTGCCAGCT TATCCAAACC CATCCCACCA ATCGAAACAT CCACTAATGT CAGTCGCGTG ACCATCTCCA GCCTACTCGA CCAACTGACC GATCTCCATG ACCGACAACA AAAAGAGCGT GTAGCGGAGT GGGATGTGTT CATCAAGAAA AGAGCAAAGA GTAGAGCGGC GGATAAAGGT CATGGTTGGA CAGCTGGACT GATAGGTGTG AGTCAGATGG GGTTGAGCGG GAAGGGACAG GAAGATTGGA AGACGTTTTC GAGGTTGACG AGAAGAGGTA TACCCTTGAA ATACAGAGGG GACATTTGGG CAGGTGAGTC CATCAGCATG AGCAGTTATC CTCCGTCCTC AATCTGACTT ATAATTTGAA GAATGCTCTG GCGCCAAAGA TCTCATGGTA CCCGGGGAGT ACGCCGAAAT TCTCATCGTA CATAAAGACG ATATAAGCCC AGTTATGGCT GACATTGAGA AAGATGTCTC AAGGACGTTT CCTGGGAACG TGTTCTTTGG CGGTGATGGT CCAGGGGTGG AAAAACTGAG GAGAGTTCTT GTGGCTTATT CATGGTGAGT TGAGAAGCGT TCAGTCTGCG GCAAGTTGCT GATTCGCGGT TCATAGGTAC AACCCTGGTG TCGGATAGTG AGTAAAGCGA TGTTTCTTTT GGACAAAAAA CTGATCATGC TTGCCTGGCC GCAGTTGTCA AGGGATGAAT GTAAGATTTG CCTATTCATT TGATCTGTTA ATGACATGGC TGACGTTCAA CTTTAGATGG TCGCCGCCAC CCTGTTGCTA ACACACAGCG ATGAAGGTAA ATCACTCCCC GGTGCATCCC ATTTCTTCAC GGTGACGCTG ATTGAGTTTT TTCCCTTGTC TTTTTTAGAA CAAGCCTTCT GGATCCTGAT CTGCATCATC GATCGCCTTC TTCCCCCAAA CTACTTTTCC CCATCCCTCG TTGGTTCTCG TGCCGACCAG CTCGTTCTTT CCCAAATTGT TGCGCAGATA TTACCCAAGC TTCACGCTCA TTTCGTGGCG CTTGGTGTTG ATCTGGCTAG CATCACGTTC GGCTGGTTCC TCAGTCTTTT TACGGACTGT CTTCCCGTCG AGGTAAGTCG AGACATGCTA CTTTATGAGT ATGAAGGCTG ATGATGGTCG TCCGTCAAGA CTCTATTCCG AGTTTGGGAC TTGTTCTTTG TCGAAGGGCA TGATGTGAGA TCGTCGCCTT CATCCTTCAG TGGTATATGG CTGACGTGTC CTGGCAGAGC ATCTTCCGTG TCGCCGTTGC TATACTCAAA ATTAACGAGA TCGAGATCTG CAACTGTAAA ACTGTTGGAG ATCTTTTCAC TTTCATCTCC GCAATGACTT CTAGACTTTG GGCGGCGGAT AAGCTAGTCT CAGTGAGTTG TATTTTGTAA ACCATTCATG AATTGCTGGC TGAATTATTT TTTCTCTCAG TTACAACATA ATTTCAAACC AATCATTAGA CACACGGACA TTACAGCAAA ATGTGAAAAG GCGAGCGAAT TGCTCGAGAA GGAAGCAGAG GGCGCGTAAA TGCTTTATTC ATGTTCTATC TCTTATCCTT CTCACCTTTG TTGTTTGTGA CATA
|
Protein sequence | MAPSVPPPQR HHSGDAHPLA TPTRHSAHRP HAATISTSRP ANALLDTPRS SRPPLNRKPS ATAKPWDHLE SLAKDELSIV DTRFDLMSDD ELYEYLQHVP VAPEDPTPHV ELSAPVFPAN ERTSSPAGPL YTAQLPPSGD KSPLFPPSPP SLQNNAQITD HPLRVLSRAV RELREVIERL EDENARLRMN QVERKPASGR ATDQVREQLL RAKQAFDLPQ PDADAASINE NHDRKSSRQS WTSGLWVWGN KKNSVTKRSS MGSVASVNQP VPPSPNAIPR STPEHEDEDE AWRKGDGGSS PSYRAIFLAT RILTPDPSSI LVPTETPPKP LIAQLAHSLV SNARDEGIVA KEAVNRRRSR DLSRSRAISL GGQERSQTDE ARNKDSKGYG DSALTATALL GRSLLSSVTG ATIRGSRSGA SVVNEETRPS VLSRGSSGHG FPVAAAPSSP AISHSAAVGS PLSEAAPLPS VELSSIVPDE SRPPTVLLSR ENLGSFFQSN RVNRAKMVTA SRFESDKPPL TDRYGFIYDI QHAKMLKDAS VAGTPAPMSL NGTLFKNDDP EEEGWIAKHR RGSHGSQKSD SKSIKNTGDV RENSQLASPR PSIDSTSSST QAPSRSSDTP ESVASPKTRS RSSSHADQHR HRSSTLLSLN PSPARPVTGK DHLTVSARGS SSLHSGVSPS ITSTTAPQPI SASLSKPIPP IETSTNVSRV TISSLLDQLT DLHDRQQKER VAEWDVFIKK RAKSRAADKG HGWTAGLIGV SQMGLSGKGQ EDWKTFSRLT RRGIPLKYRG DIWAECSGAK DLMVPGEYAE ILIVHKDDIS PVMADIEKDV SRTFPGNVFF GGDGPGVEKL RRVLVAYSWY NPGVGYCQGM NMVAATLLLT HSDEEQAFWI LICIIDRLLP PNYFSPSLVG SRADQLVLSQ IVAQILPKLH AHFVALGVDL ASITFGWFLS LFTDCLPVET LFRVWDLFFV EGHDSIFRVA VAILKINEIE ICNCKTVGDL FTFISAMTSR LWAADKLVSL QHNFKPIIRH TDITAKCEKA SELLEKEAEG A
|
| |