Gene CND00190 details

Gene Information

• Locus tag: CND00190
• ID: 3257182
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006686
• Strand: +
• Start bp: 64209
• End bp: 66191
• Gene Length: 1983 bp
• Protein Length: 574 aa
• GC content: 49%
• IMG OID: 638255956
• Product: conserved hypothetical protein
• Protein accession: XP_570339
• Protein GI: 58266366
• COG category: [R] General function prediction only
• COG ID: [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CATTTTCCCA TTTTAACTTC CATTGTTAAC CATCGACACA ACTGGCTTGG GCAGCATGGC 
AGATGGCTCA GAGGCGTACA ATATTGACGC TTTCCCCAAC GCCGATTTCT CAGCTAGAGA 
ACTGCCGCGT CCCAGCTTCA GCAGAACGCA AGATGTTCGT GGTTTGGTCA AGCACGTCAG 
GACGGTAGCT TGGTCTTGTG ATGGTAAGAA AGCGGCAACT GGTGGAGAAT ATAAGGAGAT 
TCAAGTATGG GACGAGTCTG TATGTCGGCT GCTTGGTAGA TGAGACATTG TTGACCTCAT 
CTGTAGCTTG ACTCTAAAAC GACAACACCT TTACCGTCAG CTTCAAAACC AAGCCCTCAT 
AACCACCATG TTTCGTCTAT CGCTTGGTCT CCTGTCGATC CAAACATTTT GGTATCTGCC 
GACAAGACAT TTAGCGTGGG CAGCGTCATC GCGGTCTGGG ACGTCACCTG TAGGTTTTAA 
CTTGTGGACA GCTGCGAATG AGGAGCTAAT AAGCGTATGC AGCCCCGTCT GCACCTATAG 
CAACTTTCAA AACGCCTGGA GACGTAATTA ACCTCGCCTG GCATCCATCT GGTCAACATT 
TTGCTGCCGT CTACCCCGTC AAAAGCCGCG ACCTGGTCGA CTTTTTCCGA CTCTCGTTCA 
GTGAGAGTGG TGAACCAAAA TGGGAAAAGA GAGAGGACAT CACTCTTGGG GGCCTTTCAC 
ATGGTATAGG ATCAGAAGAG ATCAATAGTC TGAGATTCAT CAATTCTGGT CAATTGGTTT 
GTGCAGTGTC AAATGATGGC TCGGTCAGTG CTTGGGTTTA TCCTGTAGAG AGTGTGCGAG 
TGGATTTGGT AGAGGAGCAA GTAGAGCCGG AGCCGGAGCA AGAACGAGAA CAAGAACGAG 
AACAAGAACA AGAACAAGAA CACGAACAAG AACAAGAACA AGAGCAAGAA CAAGAACAAG 
AACAAGAGCA AGAACAAGAA CAAGAGGAGA AGGAGGCTGA GGTAGTCACG GAGGAGAAGG 
AAGACGAAGT AGTAACGGAG GAGAAGGAAG ACGAGCTAGC AACGGAGGAG AAGGAAGACG 
AGGTAATAGC GGAGGAGAAG GAAGACGAGG TAGCCACGGA GGAGAACGAA GAAAAGGAAG 
ACAGGGAAGA TAAGGAGGAA GACCAAAACG AAGAAAACAA GCAAGACGTG GAGGATGGTC 
CCGCGACGCC CGAGTTACCA GCTATAGAAA CGCCCACTGA ACGACCTTTG GGGGACGTTA 
AACCTGCTGA GAACAACGGC GATGTTGAAA TGACAGAAAC TGAGAATGCC GACGCAAAAG 
CAAATGAGGA ATCAAAAGGG GAGGAAGCGC CAGAGACTAA CAAGCCCGAA TTTCAAGATG 
TGGAGATGGT CGACGCTGCA CAATCCAACA CTCAACCGTC CTCTGTCCAA CCCAGCCGAC 
AATCCTCTCC TCCACCCCCC ACCAAGACAT CCCCTAAACC CCGTGCACAG CCATTGAAGA 
GGTATCGACA TGATGTCTGC TATGCGGCCA GTTTACTAAG TCTGGCGTAT GATCCAAGAG 
GGAGATATTT CGTGGTAGGA GGGCAGGATG CGTTGCTGAG CCTGTTCGAT ACGAAGGAAT 
GGATATGTGA AAAGAGTTTT GATGTTTGCA CGTTAGTTTC ATTAACCTGT GCTTTGGCTC 
TCCTATGCTG ATATGCCTCT TGTAGTGCGG CGATACGGCA CACTGCGTTC TCGTATGACG 
GGGAGTTTGT AGCGATCGGA GGGGATGATC TGTTCATTGC CATCGTACGT CCTTATCATT 
TGCACTTGTT CATTATTAAT GCTCTGTCAA CAGGTATCAG TCTATACCGG CCAAACTGTT 
GCCAAAATCC CGATCCCGGC AGCTGTTAAC GCGCTTTCAT GGAATCCCAA TAAGAACTCT 
TTAGCATACT GTCATCAGGG AAAAGGTGGT GTACCGTTAT GGCACATCGT GCACCAAGAG 
TAA 

 

Protein sequence

MADGSEAYNI DAFPNADFSA RELPRPSFSR TQDVRGLVKH VRTVAWSCDG KKAATGGEYK 
EIQVWDESLD SKTTTPLPSA SKPSPHNHHV SSIAWSPVDP NILVSADKTF SVGSVIAVWD 
VTSPSAPIAT FKTPGDVINL AWHPSGQHFA AVYPVKSRDL VDFFRLSFSE SGEPKWEKRE 
DITLGGLSHG IGSEEINSLR FINSGQLVCA VSNDGSVSAW VYPVESVRVD LVEEQVEPEP 
EQEREQEREQ EQEQEHEQEQ EQEQEQEQEQ EQEQEQEEKE AEVVTEEKED EVVTEEKEDE 
LATEEKEDEV IAEEKEDEVA TEENEEKEDR EDKEEDQNEE NKQDVEDGPA TPELPAIETP 
TERPLGDVKP AENNGDVEMT ETENADAKAN EESKGEEAPE TNKPEFQDVE MVDAAQSNTQ 
PSSVQPSRQS SPPPPTKTSP KPRAQPLKRY RHDVCYAASL LSLAYDPRGR YFVVGGQDAL 
LSLFDTKEWI CEKSFDVCTA AIRHTAFSYD GEFVAIGGDD LFIAIVSVYT GQTVAKIPIP 
AAVNALSWNP NKNSLAYCHQ GKGGVPLWHI VHQE