Gene CNC06300 details

Gene Information

• Locus tag: CNC06300
• ID: 3256770
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: +
• Start bp: 1839433
• End bp: 1841507
• Gene Length: 2075 bp
• Protein Length: 493 aa
• GC content: 49%
• IMG OID: 638255849
• Product: lipid binding protein, putative
• Protein accession: XP_569888
• Protein GI: 58265464
• COG category: [R] General function prediction only; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG5391] Phox homology (PX) domain protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.153716
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCGCTATACT CTGATATACT TTCCCCCCAA ATCGCTCACA AGCTATGGAC CAGGACGGAT 
TTCACTCAAT TGCATGGGAC GACGCACCCT CAAGCAACCC TCCTCTGTCT GCCCCGTCGC 
CATCTCAATC GCCATTTGAA GAGGGCTTCG AATCCATCTC ACCGTCATCC GCACAACCGC 
CGGCTTCAGA TCAGTATGAA GGTTACGATA ACTCAAAGGC TGGTGAAGCT GGAGACGTTG 
GGGTGACATT GGATAGGAGG GAGAGGCTTG GGGGTCACGA AGTTGATGGA TCAGTCTGGA 
ATGGGAAATG GATGGATGTG CAGGTCAGAG AACCCGCCAA AGAGCACGAG GGGAGTAAGG 
ATATGTACGT TTCGTACGCT GTCAAGACAG AGGCAAGTTT ATGACTGTGT GAATGGGAGA 
ATGTTCTGAT TTCAATGAAT AGACGAGCCT TCCAACATTC AGGAAACCTC TCACAGTTGT 
CCGGAGGCGA TTTCAGGACT TTGTCTTTCT GCGAGAACAT CTCGTGAAGA ACTTTCCAGC 
TTGCGTCGTG CCTCCGATCC CTGATAAGCA TCGTTTAGGT AAGCTCCTTG CCTATCATAT 
GGAGATCATC GCTCAATCAT ATGAACAGAA TACATCAAGG GAGACAGGTT CTCTCCTGAG 
TTTGTCGAAC GTCGCCGATT GGAGTAGGTA CAAGCTTTGG TGAAAGATCG ACCTATGCTG 
ATGCTATCAA CAGTTTGCAA CGATTCGCGG ATAGGATAGC ACGCCATCCC GTCCTTCAAC 
GTAGCCAACT TGTCAACGAC TTCCTTCAAA GCACAGAATG GGCAAGTCCA TTTGGTATAC 
CAGCCCACTA GCAAGCTAAC ACTGCTGTAC AGAGCGTAGC CAAGCACCAC CACATCTCCC 
ATCCACCTCC TGAATCTCAC GCGTCTCTCA TAGACTCCTT GTCTGACACC TTTATCAATG 
CTTTCTCACG GGTTCGTAAG CCCGATGCGA GATTTGTGGA GATGACCGAA GAGTTGGAGA 
GGTTTGAAGA AGGCCTGACT GGAGTGGAAA GGGTCGTTGG GCGAGGAAAG AGTCGGGTTG 
ATGGTACGGC TCTTATTATT GGTGATGGGA TTATAGAGCG CTGATAATCT ATCTAGACCT 
GGCGGCTGAT TATCAGGACA TGGCAGCTGC TTATCAAGGA TTGGGGTACC TCGAATCAGG 
TATCACCGAA CCCCTCAACC GCTTCGCAGA GAAGATGCTG GACTTTTCCA CTCTGCTCAA 
ACACATGGTA TGCGTCTACC CATACTTAAC GAAAATTCTT ATACTGACGC GATAGTACAT 
CGATAGAATA ACACAACCAT CGAACCGTTC CTCTCTTCCT CCCATTCACT CCTCTCATAC 
TCTGCCACCC ACCGTAACGT CATCAAGCTC CGAGATCAGA AGCAACTCGA CTTTGAAGAA 
CTCTCTGCCT ATCTCTCGGC CATTGTGTCA GAACGTGATC GCCTTGCAGC CCTTTCCTCG 
GGTCACACTG CCGCTCCTGT AGGTCTCGGA ACGTATCTCC GTGATCAGAT GGATAAATTG 
CGCGGAACGG ATGACATCCA TACCCGGCGG GAAAGGATGA GGAAGATGGA TGGGAAAATC 
AAAGAGTTGC AAGATGCTGT GACATTGGCG CATGAGACGA GTAATGCGTT TTCGGAAGAG 
GTTATCAAGG AGCATGCGTA TTTCGAGCTG GAAAAGAAGC AGGAGATGAA GGATGCGTTG 
CAGGCGTATA CGGATGGACA GGTGGAGATG CTGCAACAGG CGATGGATGA CTGGGATCGC 
GTAAGTGCCT GCATCCACGC GTGGTAGAGA CTGTTTGGCT AATTCTTCTA TCGCGGGCGA 
TCACAGATTA TTCCACTTCT TCAACGAATA CGCGTAGATG TTTGAGTGTC GCAATCACTA 
AAACTAAATT AAAACGGTGG TTTTGCTCTT CGTTTGTTGT ATATGCAGTC TCGTCATAAT 
CCTTGGTTGA AAGCAGATAG GAAGGTAAAT TAGAAATCAT GACTTTTCAT TCCCCCGATT 
TGTATAAACA ATGCCCATGC TATGCCTTAC ACCAT 

 

Protein sequence

MDQDGFHSIA WDDAPSSNPP LSAPSPSQSP FEEGFESISP SSAQPPASDQ YEGYDNSKAG 
EAGDVGVTLD RRERLGGHEV DGSVWNGKWM DVQVREPAKE HEGSKDMYVS YAVKTETSLP 
TFRKPLTVVR RRFQDFVFLR EHLVKNFPAC VVPPIPDKHR LEYIKGDRFS PEFVERRRLD 
LQRFADRIAR HPVLQRSQLV NDFLQSTEWS VAKHHHISHP PPESHASLID SLSDTFINAF 
SRVRKPDARF VEMTEELERF EEGLTGVERV VGRGKSRVDD LAADYQDMAA AYQGLGYLES 
GITEPLNRFA EKMLDFSTLL KHMNNTTIEP FLSSSHSLLS YSATHRNVIK LRDQKQLDFE 
ELSAYLSAIV SERDRLAALS SGHTAAPVGL GTYLRDQMDK LRGTDDIHTR RERMRKMDGK 
IKELQDAVTL AHETSNAFSE EVIKEHAYFE LEKKQEMKDA LQAYTDGQVE MLQQAMDDWD 
RIIPLLQRIR VDV