| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC06220 |
|---|
| Symbol | |
|---|
| ID | 3256441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | - |
|---|
| Start bp | 1812391 |
|---|
| End bp | 1813763 |
|---|
| Gene Length | 1373 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638255842 |
|---|
| Product | glycerate-and formate-dehydrogenase, putative |
|---|
| Protein accession | XP_569881 |
|---|
| Protein GI | 58265450 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCA CCGTCGCCCC TCGCCGAAAG ATCTTGGGTA TCGGGTATCC TCGCTTTGCC
ATTCCCGAAT GGAAAGAGCT CGCGGAAAAG TATGATATTC ACTATTTCAT CCCAGACGAG
CGCAAGCAAG TCATGCGAGA GATTAAGAGG CTCTGTGACG AACAGGGGCC TTTTGATGCT
GCTTATGTCG TATGTTCCTC GTGACCGGAC TTCTTGAATG TCGTGTTGTT GACTCATGGC
ATCTTATAGC TCTTCGGAAC TGCCGCTTAC TCTCCATTCC ATCCCGACTT GCTCGGTCCC
CTCTTTGAGA AGCCTGGGTA CTGTGGTCTC TTTGCTCAAG GCGGTGCAGG TAAATAGATG
TCTTTCCAAA ACTTGGTATG ACGACATGAC TGACATCTTG CAAAAGGCTA CGACGATGTC
GACTACCCGT GGCTGGCTGC CAACGGATGC TACCTCTCCA ATACCCCCAA TGCTGTCACA
GAAGCTACCG CAGATATGGG CATCCTACTC GTGCTCGCTG CCGTCAGAGG TCTCTACGAA
GCTGAAGTTA GCGTCAGGGC TGGTCAATGG AGGAAAGGCA TTGAGTTGAC AGATGACCCC
ACCGAAATGA CTATTGGTTT TATTGGATTG GGTGAGCGTC CTAATGAAAC CAGTCGAAGT
TTCGTGACTG ACTTGAAGTA GGTGCTATTG GTAAGAGCAT GGCCAAGAAG ACCAAGCCTT
GGAATATGAA GATTCTCTAT CACAACCGAA AGCCTTTGCC CAAAGAAGGT GCGCGTATAC
ACAGTATGTC CGACAAGAAC TAACATTCTT TAAGAGGAAG AGACGCTCGG AGCTACCTTT
GTCTCTTTGG ATGAACTCCT CGCTCAATCT GATGTCATCT CCCTCAACTG TCCTCTCACC
CCCGAGACAC GAGGCATCCT CTCAGACAAA GAGTTTGAGA AGATGAAGGA TGGGGTATAC
ATCGTCAACA CTGCCCGAGT AAATTAAATC CTGCCATTCG AAGCAAGCTT TCAGACACTA
ATACTGACTA TCGCGGTAGG GAGCTGTAAT TGATGAACCA GCCCTTATTC GAGCTCTCAA
GTCTGGCAAG GTCCGACGAG CAGGTCTTGA TGTTCTTACC AACGAGCCCT GTGCCGACTC
ACCCCTATAC AGCATGAAAA ACGTCACCTT ACAACCACAT CTTGGAGCAT TCACAAAGGG
GACCATGTTG AGAGGGGAGC GGGAGGTATT TGCCAATGTA AAGCAGTAGT GAGTCTCGCC
TCGGACTTTG CGTGGTGTGG CACATCGCAT AACGCTGACC CCATAAATAT AGTATGGAAA
TTGGGCTACC TGTCAACCCT GTCAACACCC CTGCTAAAGT TGAGAAAAAG TAG
|
|---|
| Protein sequence | MTVTVAPRRK ILGIGYPRFA IPEWKELAEK YDIHYFIPDE RKQVMREIKR LCDEQGPFDA
AYVLFGTAAY SPFHPDLLGP LFEKPGYCGL FAQGGAGYDD VDYPWLAANG CYLSNTPNAV
TEATADMGIL LVLAAVRGLY EAEVSVRAGQ WRKGIELTDD PTEMTIGFIG LGAIGKSMAK
KTKPWNMKIL YHNRKPLPKE EEETLGATFV SLDELLAQSD VISLNCPLTP ETRGILSDKE
FEKMKDGVYI VNTARGAVID EPALIRALKS GKVRRAGLDV LTNEPCADSP LYSMKNVTLQ
PHLGAFTKGT MLRGEREVFA NVKQYMEIGL PVNPVNTPAK VEKK
|
|---|
| |