| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC06080 |
|---|
| Symbol | |
|---|
| ID | 3256454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | - |
|---|
| Start bp | 1787079 |
|---|
| End bp | 1789682 |
|---|
| Gene Length | 2604 bp |
|---|
| Protein Length | 609 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638255829 |
|---|
| Product | nucleus protein, putative |
|---|
| Protein accession | XP_569870 |
|---|
| Protein GI | 58265428 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5082] Arginine methyltransferase-interacting protein, contains RING Zn-finger |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAAC AGACCCAGCC GCTCAAAATG TAAGTAGATA ATCCATCAGT GTCCCAAAGC
AAGACTGACA TTCGTTCTAG CCTTGCCATA GGATCACCTC TATCGGAGCT CTCCACCTTG
GTATCTAAGA TCACGGCCAT CAACGGGAAG CATGGTCCGT TCGACGCATG TGTTGTCGTG
GGGGATTTGT TTGCTGAGGG AACCGATGGG AGTGAAGTTG CAGGGCTGAA ATGTGAGTTT
GACATCAGAA AGAGCAGTAT AATGTCATGC TAAACCTGTA ATCTTCAAGT TCCTGTGCCG
ACTTATTTTA CATTGGGCAA AAATATCTTG CCCCAATCGA TCCAAGAGAA GATCTCAGAA
ACGGGCGGAG AAGTGGTAGA CAACCTCGTT TTTCTTGGTA AATATGAAGT TAAGCTGTTT
CAGACTGCTG CCTCGTAACT CACCGTGTTT TTAGGTAAAT CAAAGGTGCT CACCACTGCT
CAAGGTCTTA AGATTGCTTG CATTGGAGGC GGTTACAGCC CTGAGACCTA CAATGTCCTC
GACGTGAGGC TTTTTATCAT GTTCTGGCGC CTTGCTAAGT CTTTCTACAG GATCCATATT
CTCCTGTCAT AACTCGTGAA AGCGTTGATG CCGTCTTGAA ACATTCCCTT CTCTCTGAAC
CTTCCACCAA AACAGCCGAA TCTTTGGCTT CTGCCAAGCA ATCAGCGGCG GTTCTTCCTG
CAGCATTTCA AGGTATAGAT CTCTTGTTAT TTTCTTCACC AGCTCCTCCT ATATCCTCCC
TTTCCCCTTC TTTCACAACC TCCGGGGTCT CGCTCATCAA TCCTGCACCT CCTCTGGAAG
AGGTTGTCAA AAAGGCAAAA CCAAGATACC TCCTTTGGGG GAATGGTGAA GGTTTCTGGG
AAAGAGAACC ATGGGGTTGG GCTAGCCCGT CAGGGAAGGA GGAGAGGTGG ACTAGGGCGG
TCAAGTTGGG AGCGTTAGGA GGAGAGGTGC CTGCTGGAGG TAAAAAGGCT AGGGTAAGAA
TAAATCTTTT GCCAGAACAA AAAGATTGAA GCGTGGAATG ATGGCTGATG TTTAATGGGA
CAGTGGTTCT ACGCTTTCAC TCTCCCTCCT CAAAGCTCCT CTACTCCAGT GCCCGCCCGG
CCCGCCAACG CGACACCTAA CCCTTTCCTG CCCGTGCCCA TTGTGAAAAA GCGAGGTCTT
GATGAAGACG ATGTTAACGG ACAGTCACAA AAGAAGGGCC GGCTGGGTGT GTATTTGAAA
AGCCTCTTAT CATCACCAGA ACAGTGCTGA TGCTCCATCC CCGAAGACGG TGCACCTCCT
CCAGCTGACT ATATGTGCAA GATTTGTTCT CAAGCTGGTG TGAGTCGCTT CGTTACATGT
GTGATATAGT GGCTGACTTG ATCATTTGTC AGCATTGGAT TCAAGATTGT CCCATGAAAG
GCGACAAATC CAAGCCGCCT CCAGGATACA AGTGCAAAAT CTGCCAATCC GTAAGTCCTG
GCCCACCAGT TTGACGGCAC ATGCAGTAGG TACCGGACGT CCAGCTGACT CGGTCTCTCT
TTTCCTCTCT CTCTTTACCG CGAAATCAAT CAGCCGGACC ACTTCGTCCG AGAATGTCCT
AACAAGGAAG ATAAACCAAG GGGACCTAAG CCGCCTCCTC AAGGTTATGT ATGTCGTGCA
TGTGGAGCCG ACGGGCAACA TTACATCCGG GATTGTCCTT TGGTTTTGGA AAGGGAAGAA
GCCAAAGCCA AGAAGAAGGA GCTTGGTCCT GCTGAATGTG AGTGTGCAGT TTAAAAGCTG
GGGGTTTGTT AGCTGATCAT TCGCGTAGGT TGGTTCTGTC TGAGTAACCC TAAAGTCACC
AAGCATCTCA TCGTTGCAAT CGGAGCAGAA ACTTACGTGA CACTTCCCAA AGGACAACTT
ATACCTACTG ACGAGGGCAA ATCACTTGTC CCTGGTGGAG GACATGTTCT GGTATGTTCA
GCCTCATACT TCTGGACATT TTCTCCTGAC AATCACACTT CCAGATCATT CCCATCGCTC
ATCATCCTAC TCTCCTCTCC ATTCCCGCCG ATGACGCCAT GTCAATCATC TCTGAATTAG
AGGGCTTCAA ATCTTCTCTC CGAGAATGTT ATGCCTCTTA TGGTGCTGTC CCCGTCTCAT
TTGAGGTCGG CCGTCTCAGT GGCAGGGGGG GGCACGCGCA CGTGCAGATC GTACCTATCC
CCAAAGAGTT GGCGAATAAA GTCGAGGAAT CATTCAGGAT TGCAGGAGAA AGACAGGGTA
TCGATTGGGA AAAGGAGCCG GAGAGGGCGT TGGCGAGAGC TGGATCTGGT GGAAACTATT
TCAAAGTGGA ATGCCCAGAT GGGACCAAGA TGGTGCACAT GTTGAAGGGG AACTTTGACC
TTCAGTTTGG CAGGTAAGTC TTGGCCGGTT TCTATTTGGG GGAAATCATC CTTGACTAAT
GGGCTCTTTT TGTTCAGAAT CGTACTTGGC AGTCTTTTGG GTCTACAGCA TCGTATTGAT
TGGAAAGCGT GTGCTAAGAG TGATGCGGAG GAGAAAGAGG ATGCTGTCAA GTTCAAAAAA
GCGTTTGCTC CATTCCATTC ATAG
|
|---|
| Protein sequence | MAQQTQPLKI LAIGSPLSEL STLVSKITAI NGKHGPFDAC VVVGDLFAEG TDGSEVAGLK
CKSKVLTTAQ GLKIACIGGG YSPETYNVLD DPYSPVITRE SVDAVLKHSL LSEPSTKTAE
SLASAKQSAA VLPAAFQGID LLLFSSPAPP ISSLSPSFTT SGVSLINPAP PLEEVVKKAK
PRYLLWGNGE GFWEREPWGW ASPSGKEERW TRAVKLGALG GEVPAGGKKA RWFYAFTLPP
QSSSTPVPAR PANATPNPFL PVPIVKKRGL DEDDVNGQSQ KKGRLDGAPP PADYMCKICS
QAGHWIQDCP MKGDKSKPPP GYKCKICQSP DHFVRECPNK EDKPRGPKPP PQGYVCRACG
ADGQHYIRDC PLVLEREEAK AKKKELGPAE CWFCLSNPKV TKHLIVAIGA ETYVTLPKGQ
LIPTDEGKSL VPGGGHVLII PIAHHPTLLS IPADDAMSII SELEGFKSSL RECYASYGAV
PVSFEVGRLS GRGGHAHVQI VPIPKELANK VEESFRIAGE RQGIDWEKEP ERALARAGSG
GNYFKVECPD GTKMVHMLKG NFDLQFGRIV LGSLLGLQHR IDWKACAKSD AEEKEDAVKF
KKAFAPFHS
|
|---|
| |