Gene CNC06030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC06030 
Symbol 
ID3256347 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1778672 
End bp1780021 
Gene Length1350 bp 
Protein Length393 aa 
Translation table 
GC content55% 
IMG OID638255824 
ProductRNA binding protein, putative 
Protein accessionXP_569824 
Protein GI58265336 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAGAATTTAA AAAAATCAAG ACATGCCTTC AAGAGGCCGC TCAACGACTC CCAAGTCACT 
CACCCCAGAC CGCTCTCCGG CCAGGTCTTA CCTCTCTCGA TCTAGATCTC CTTCCAGGTC
CAGGTCAAGG TCGCCCCTTC CCAGAAAGGC ATCTCTTCGA GATGCCGACA TGGACGCGCC
CGGAGATGGC CTGTACAAGG TCATCGTGGT ATCTGGATTG AGCAAGAATG TTATGAAGGG
CCATTTGGAC GAGATCTTCT CAGAGTATGG GCGGATTACT GGGATTGATT TGCCGTTGTT
TAAAGTTTGT AAGTTTGTCA TACTCCTTTT TGCTGGGCAA ATAGTCGCGT CGTATTATGT
CGATAACGTT GATGCTGACT GAAATAATAG CTGGACTGAA CAAGGGTAAA GCTGCAATTG
AGTTTGATAC GCCTGCCGCG GCGTCAAAGG CAGTCAAGTG TATGGATGGT GGGCAGTTGG
ATGGATCTTT CCTCAATGTT CAGGTAAGTT TGTCAATCAA GCCCATGCAT GAACTAGCTG
CTGACGAACA GCGACAGATT TCTGAACATC CTCTCCCTCC TCCTCAAGCT CCTTCTCCTC
GTCGTCGATC CCCGTCTCGT TCGCGTAGCC GCTCTCCTCC TCCCGCCCGT CGTCGCCGTT
CACTCTCCCG ATCTCGTTCC CCCTCTCCCC GCAAAGGCGA CCGTGTCCCC TCTTATGGAC
GACGCCGTTC GTACTCCCGT TCGCGTTCGC CCCCCAGGCA CCGTGGTGGA CGAGACTCGT
TCCCTGGACG AAATGGTAAC GGTTACGGCC CTGGACCTTC TGGCGGTCGC GGTGGTGGTG
GTGGCCGAGG AGGATTCTCA AGAGGTGGCG GGCCACCCCC TCCCGGAGGA AGAGACAATG
GATGGAGGCG AGAGAGGAGC CCTCCTGTGC CTGTGCGTAA ATGGGGTGAG CGTGGTGCGC
CTAGGAGGCC GTCTCCGGAG TATGGCCGCG GTGCGAGATC AGCCTCGCGT TCGGTCAGCC
CGCGAGGTCC ACGTGGTGGT GTGAGATCGC GTTCGCCTGT CAGACGACGC GCAAGTGTTA
GTAGGAGCAG GAGTCCGGTT AGGAGGAGGA GTAGGAGTAG GGCGAGGAGT TACTCTAGGG
GACGGAGTGT TAGTATGAGC AGGAGCAGGA GCAGGTCTCC TCTCCCTAGG AAAAGATACA
GCCTCAGCAG GAGTAGAAGT AGGAGCAGCA CCAGGAGCAT GAGCATTGAC AGGAGTAGAA
GCGGCACCAG AAGCCCCAGG AAGTAAAGAG AGACGAATAT GTAACTTGAT TATATAGCTA
TACTGGAATG AATTTAAAGC TGTTTTATTC
 
Protein sequence
MPSRGRSTTP KSLTPDRSPA RSYLSRSRSP SRSRSRSPLP RKASLRDADM DAPGDGLYKV 
IVVSGLSKNV MKGHLDEIFS EYGRITGIDL PLFKVSGLNK GKAAIEFDTP AAASKAVKCM
DGGQLDGSFL NVQVSLSIKP MHELAADEQR QISEHPLPPP QAPSPRRRSP SRSRSRSPPP
ARRRRSLSRS RSPSPRKGDR VPSYGRRRSY SRSRSPPRHR GGRDSFPGRN GNGYGPGPSG
GRGGGGGRGG FSRGGGPPPP GGRDNGWRRE RSPPVPVRKW GERGAPRRPS PEYGRGARSA
SRSVSPRGPR GGVRSRSPVR RRASVSRSRS PVRRRSRSRA RSYSRGRSVS MSRSRSRSPL
PRKRYSLSRS RSRSSTRSMS IDRSRSGTRS PRK