Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC06030 |
Symbol | |
ID | 3256347 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | - |
Start bp | 1778672 |
End bp | 1780021 |
Gene Length | 1350 bp |
Protein Length | 393 aa |
Translation table | |
GC content | 55% |
IMG OID | 638255824 |
Product | RNA binding protein, putative |
Protein accession | XP_569824 |
Protein GI | 58265336 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AAGAATTTAA AAAAATCAAG ACATGCCTTC AAGAGGCCGC TCAACGACTC CCAAGTCACT CACCCCAGAC CGCTCTCCGG CCAGGTCTTA CCTCTCTCGA TCTAGATCTC CTTCCAGGTC CAGGTCAAGG TCGCCCCTTC CCAGAAAGGC ATCTCTTCGA GATGCCGACA TGGACGCGCC CGGAGATGGC CTGTACAAGG TCATCGTGGT ATCTGGATTG AGCAAGAATG TTATGAAGGG CCATTTGGAC GAGATCTTCT CAGAGTATGG GCGGATTACT GGGATTGATT TGCCGTTGTT TAAAGTTTGT AAGTTTGTCA TACTCCTTTT TGCTGGGCAA ATAGTCGCGT CGTATTATGT CGATAACGTT GATGCTGACT GAAATAATAG CTGGACTGAA CAAGGGTAAA GCTGCAATTG AGTTTGATAC GCCTGCCGCG GCGTCAAAGG CAGTCAAGTG TATGGATGGT GGGCAGTTGG ATGGATCTTT CCTCAATGTT CAGGTAAGTT TGTCAATCAA GCCCATGCAT GAACTAGCTG CTGACGAACA GCGACAGATT TCTGAACATC CTCTCCCTCC TCCTCAAGCT CCTTCTCCTC GTCGTCGATC CCCGTCTCGT TCGCGTAGCC GCTCTCCTCC TCCCGCCCGT CGTCGCCGTT CACTCTCCCG ATCTCGTTCC CCCTCTCCCC GCAAAGGCGA CCGTGTCCCC TCTTATGGAC GACGCCGTTC GTACTCCCGT TCGCGTTCGC CCCCCAGGCA CCGTGGTGGA CGAGACTCGT TCCCTGGACG AAATGGTAAC GGTTACGGCC CTGGACCTTC TGGCGGTCGC GGTGGTGGTG GTGGCCGAGG AGGATTCTCA AGAGGTGGCG GGCCACCCCC TCCCGGAGGA AGAGACAATG GATGGAGGCG AGAGAGGAGC CCTCCTGTGC CTGTGCGTAA ATGGGGTGAG CGTGGTGCGC CTAGGAGGCC GTCTCCGGAG TATGGCCGCG GTGCGAGATC AGCCTCGCGT TCGGTCAGCC CGCGAGGTCC ACGTGGTGGT GTGAGATCGC GTTCGCCTGT CAGACGACGC GCAAGTGTTA GTAGGAGCAG GAGTCCGGTT AGGAGGAGGA GTAGGAGTAG GGCGAGGAGT TACTCTAGGG GACGGAGTGT TAGTATGAGC AGGAGCAGGA GCAGGTCTCC TCTCCCTAGG AAAAGATACA GCCTCAGCAG GAGTAGAAGT AGGAGCAGCA CCAGGAGCAT GAGCATTGAC AGGAGTAGAA GCGGCACCAG AAGCCCCAGG AAGTAAAGAG AGACGAATAT GTAACTTGAT TATATAGCTA TACTGGAATG AATTTAAAGC TGTTTTATTC
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Protein sequence | MPSRGRSTTP KSLTPDRSPA RSYLSRSRSP SRSRSRSPLP RKASLRDADM DAPGDGLYKV IVVSGLSKNV MKGHLDEIFS EYGRITGIDL PLFKVSGLNK GKAAIEFDTP AAASKAVKCM DGGQLDGSFL NVQVSLSIKP MHELAADEQR QISEHPLPPP QAPSPRRRSP SRSRSRSPPP ARRRRSLSRS RSPSPRKGDR VPSYGRRRSY SRSRSPPRHR GGRDSFPGRN GNGYGPGPSG GRGGGGGRGG FSRGGGPPPP GGRDNGWRRE RSPPVPVRKW GERGAPRRPS PEYGRGARSA SRSVSPRGPR GGVRSRSPVR RRASVSRSRS PVRRRSRSRA RSYSRGRSVS MSRSRSRSPL PRKRYSLSRS RSRSSTRSMS IDRSRSGTRS PRK
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