| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC05860 |
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| Symbol | |
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| ID | 3256724 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006685 |
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| Strand | + |
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| Start bp | 1733302 |
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| End bp | 1738657 |
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| Gene Length | 5356 bp |
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| Protein Length | 1587 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638255807 |
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| Product | metal resistance protein ycf1, putative |
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| Protein accession | XP_569810 |
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| Protein GI | 58265308 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCCC AAGCAGCCTT CGAGGCCTTC GCCTCGAAGC ACACCCGCCC GTATGACTGT
ACCTTTCCTC CAAAAATTGT CTCGTCCCAT AGGGATCTCG ACTTTACCCA GTGCTTCGAG
CACGCCGTTT TACTGCCCGC CCCTCTCGCC TTCTTCACCT TGCTCGCACT TTCCCAGATC
TTGAGAATCA CAAGACAACT CAAGAAAGGC GGACTGAACG GTGGTCTTGC ATGGATTACG
AGGTCCAGGA GAAGTGAGAG AATATGCTCC ACCAAGGTGG TACGTTGGCT TCCATGTCTG
TGCGTTATCA TGGCTCATTC TTTTTTAGGG CTTCCTCGCA GCTTCTGCCG TCTTCTCCCT
AGTTTCATTA TGCCTTACAT TCAAAAACAT CTCTGTAAAT CTTCTTTCCG CCGCCCACTA
CTTGCTGCTC TTCGTGACTC TCTTATCGCT TATCCACCTC ACCGCCTTGA ACCACCACAC
TTCCCGAACT TCATCGACTA TTATTCTTCT CTTCTATCCC ACCTATCTTC TCGTATTTGC
CATCCGCCTT AGGACAATGA TCGTTTCTGG TGCCCTCAAC TCTGGTCTTA CCCATTCTAC
TTCAGGGCGC TTGTTGTTGG CAAGACAGGC TTTCTGGTTC GCAAGTATCA TTGCGGCTCT
TCCCGCTTTT CTGCTCGAAC TATACTCTCC TGAAAAGAAA TGGCAGAGAT GGAATGCTCC
TTGGAAGAGA AACGGCAAAA TCGCCTTGGA GGATGACGAG GAAGAAGAAG CGGATGGAAT
CGAGAACTTG GACGGCCAAG GTGCTGTGCC GGGCAAGAAC GCTTACGGCG ATGTCGAGAG
CCCCGTTTCC ACCGCCAATA TCTATGAAAT TCTGACTTTT TCTTGGCTCA CTCCTCTTCT
CTCTCTTGGT ACCCGCAAGT ACCTTGGTGA AGAAGACATG TGGGCGCTCC CCTCTGAAGA
CTCTGCCGAA GCTCTTTCCA ACCGTCTTGC GGAAACCTGG AAATCGCAAG CTGAACAGGT
CAAAGCTGGC AAAAAGAAGA GCGCTTCTCT CAAGATCGCC CTTGTCAAGG CTTACGGTGG
TCCTTATATT GTTGCTGGTA TCCTCAAGGC CTTGTATGAT ATGATCAACT TTCTGCAGCC
TCAACTTTTG AGGTTGTTAC TCAACTTTGT CTCGAGCTAC ACTAGTGAAC GTCCAATGCC
GCCTGTTACT GGGTACGCTA TTGCCGTTTT GATGTTTATC AGCGCAAACG TAGGAACCGC
CGTTTTGCAC CAGTACTTCC AGCGATGCTT TACCACCACT ATGCGTATCC GGGGTGGACT
TGTCACTTTG ATTTACCGCA AGGCACTTGT CCTTAGCAAC GGCGAAAAGT CTGGCAGGAC
TACTGGTGAC ATTGTCAACC TCCAGAGCGT TGATGCCGTC AGGATTGCAG ATGTCTGTCA
GTACGGTCAT ATTGCTTGGT CAGGCCCTTT CCAGGTAAGC ACTGCTCTTG ACTGTAAAGA
GCAATTAGCT AACCTTTGCA GATTCTCATT GCATTCATTT CTCTCTACAG GCTTGTCGGC
TGGCAAGCGT TTATGGGCGT TGCTGTCATG GTGGTCAGTT TGCCAGCAAA CACTCTCATT
TCTCGATTCA ATAAGCGCTA CCACCGGCGA TTAATGAAGG TCAAGGACAC TCGTACTCGT
ACCATGAACG AGATCCTCAA CAACATCAAG TCTATCAAGC TGTACGGCTG GGAGCAGGCA
TTTGCCAACA AGATCTACGA CATCCGTAAC AACCAAGAAC TCAAGATGTT GCGCAAGATT
GGTATCGTCA TGGCTGGAAG TAACTTTATC TGGCAAGGTA CCCCCTTCCT TGTTGCATTC
TCTACCTTTG CCACGTTTGC TTTCACCAGC GACAAACCTT TGACCAGTGA GATCATTTTC
CCCGCCATCT CTCTCTTCCA GCTTCTCTCC TTCCCCATGG CCATGTTTGC CAACATCCTC
AACTCTATCA TCGAAGCTTC CGTTTCAGTC GGCCGTTTGG AAAGTTTCCT TGCTGCTGAT
GAACTCAACC CTAATGCCCG CACTGTCATT CGACCTTCTG AAGATCCTCA GGGTGAGCCT
CAAAAGGGCG ATACCGTTGT TAGCATTAAG AATGGCGAAT TCCGATGGCT CGAGGGCTCT
ACGGAGCCCA TCCTGCAGGA CATCGACCTT GAAGTTAAAA AGGGTGAGCT TATCGCTCTT
ATCGGCCGAG TTGGTGACGG CAAATCATCT CTGTTGGGCG CGATTCTTGG TGAAATGACT
CGCTCTGACG GCTCTGTCAC TCTCCGCGGC GAGGTCGCAT ACTTTTCGCA AAACTCTTGG
ATCCTCTCTG CGACTGTCAA GGATAACATT GTGTTTGGCC ACCGATTCGA CAAACAGTTT
TACGAACAGG TGTTGGATGC TTGTGCTTTG AGGCAAGACC TTGCGGTACT TCCTAGCGGC
GATATGACCG AGGTCGGTGA AAAGGGTGTT TCCCTCTCTG GTGGTCAAAA GGCTCGTATC
TGTCTTGCTA GAGCTGTCTA TGCTCGTGCC GATATTTACC TTCTTGACGA TCCTCTTGCG
GCCGTTGATT CTCATGTCGG TCGACACATT TTCGACAAGG TCATCGGGCC TAACGGTCTC
CTTGCTTCAA AAGCCCGAAT TCTCTGTACC AACGCTGTCA CTTTTCTTCC CCAGGCCGAC
CAAATCATCT CTCTCCGTAG AGGTATTGTG CTTGAGCGGG GTACTTATGA AGAGGCCATG
AACGATTCGT CCTCTGAGCT TTACAAGCTT ATCACTGGTT TGGGCAAGCA ATCTGCCATG
GGCGATGGAC AAGATTCTGG ACAAGGTTCT GGTGCTACTA CACCTACGGT TGTTGGACAA
GAGGAGGTGG TGGTAGTTGA GGAACCAGAG GGTGTGGAAG ACAGCGAAGA AGCTGAGATT
GTCACTGGCG CTGATTCTCC TAAACAACGC AAAGCGTACC GACAGCTCAG CCGCGACATC
ATGCGTCGAT CTTCTGTCGT TTCTCTCCGT ACTGCCAAAC GTGACGCCCT GCGTGACCTA
CGCGAAAGCG CTAAACCAAA GGAACGCTCT GAAAAGGGCA ACGTGAAGCG AGAAGTCTAC
CGGGAATTCA TCAAGGCCTC TTCCAAATGG GGCGTTGCCG TCTTTATCGG CGCGATGAGT
CTCGCGCAGG GTTTGAACAT TCTTTCCAAC TTTGTACTTC GTGCTTGGGC CAGTGCCAAC
TCTGATAGTT CAGGCGAGAT GCCGAGTGTG ACCAAATACC TCCTCATCTA CGGTATCGTC
GGTATTTCTG GTTCCGTGGC CAACGTTGTC AGCGTCGCCA CGCTCAAGAT TGTTTGTGCC
CTCAAGTCTA GTAGGAGTCT CCATGACAGG TCATTTGGGG CTTTGATGAA GAGTCCCTTG
TCATTCTTCG AGCTTACACC AACAGGACGA ATCCTCAACT TGTTCTCTAG GGATATCTTT
GTTATTGATG AAGTCTTGAT TATGGCTCTC GGTGGTTTCT TCCGTACTGT AAGTGAAGAG
CTTTTCTGTT ATTGCGGTAA GCGCGTTTTG ATTTTGCGGC TGACATTTTT TGGCTTTTTT
TGGGGAGAGT AGTCCGTATC AGTCCTCGGT ACTGTGGTAG TCATTGCTAT GGGCACGCCT
TTGGTGTTGC TCGTGTTCAT CCCTCTTGGT TACCTCTACA GGATTGTCAT GAGGTTGGTG
TTTTCTTTTT TCTTTTTTCT TTTTTTTTTC CTTGAAAATT AGTGTGCGGG AAAGCTAACG
CATGATCCTC ACAGATTCTA TCTTGCTACT TCTCGAGAGC TGAAACGGCT TGACGCCGTT
TCTCGATCTC CCGTCTTCTC CTTCTTTGGC GAAACCCTTT CCGGTCTGCC TGTTATCCGA
GTAAGCGCTT ATTAAAAAAC CATCCACCAT ATACTCACGT TTTGCATTTT TTTTTAAAAT
AGGGATATGG CCAATCTGCC CGATTCATTG CCAACAACGA AGCCCGTGTG GATCGAAACC
AGGCGTGTTT CATGCCGGCT ATGACTATCA ACCGATGGCT TGCCGTCCGA CTTGAATTCC
TGGGTAGTTG CCTCATGTTC TCCACCGCGC TCACATCAGT CGCGGCTCTT ATCATGTCCA
ACAGTGTGGA TGCGGGATTG GTCGGTCTCT TGATGTCTTA TACTATTTCC GTCACCGGTA
CTCTTGTAAG TTATGGACCG GGGGAATATG GTTTTTAACT GATGATTGTC GTTTTAGAAC
TGGCTTGTGC GGAGCGCTTC CGAGGTGGAG CAGAACATTG TGTCTGTCGA GCGTGTGCTT
GGGTATGCCA ACTTGGACTC TGAAGCACCC GACTTTATCC CCGAGACCAA GCCGGCTTCT
ACTTGGCCTC AAGAAGGATC GATCGAATTT GATCACTTTA GTATGAAATA CCGACCGGAG
CTTGATTTTG TTCTTCGGGA CGTTTGCATC AAGATCAACG GTGGGGAGCG TGTCGGTGTC
TGTGGCCGAA CGGGTGCGGG CAAGTCATCG CTCACCTTGG CACTTTTCCG CATCATCGAA
GCTGCAGGAG GCAAGATTTT CATTGACGGT GTCGATATTT CGACGATTGG CTTGCACGAC
TTACGGACGA TTGTCTCCAT CATCCCGCAA GACCCTCAGT TGTTCGAAGG CACTTTGAGG
TGGGTTTTTA GATATATACA TATGTGCTAC TGTTACAGAG CTGATTGCGA TTTTTGTACG
CAGGAACAAT ATCGATCCTA CCGAGTCCGC ATCTGATGCC GATATGTGGC GAGCTCTTGA
GCAAGCCCAC TTGAAGGACC ATGTCATGAA CAATATGGGT GGCTCGCTTG ACGCCGAGGT
TTCCGAGGGT GGTAGCAGTA CGTGTTCAAG TTTTCTCTTT TTTTTTTTTT TTTTTTTTTT
TTTCGTTGAT GACATTGACG CTATTTTTTC TTTTAGACTT GAGTGCTGGT CAGCGTCAAC
TCTTATGCTT TGCGCGCGCC ATGCTACGCA AGACCAAGAT TCTAGTTTTG GACGAAGCTA
CTAGCTCTAT CGATCTTGAA ACCGATGAGG CTGTTCAGCA AATCTTGCGT GGGCCTGATT
TCAAAGATGT CACTACTATC ACCGTACGTC TTTTTTTTTA GAGTAGAAAG AGACGAGCTG
ATGTGATTTT ACTTGTGCCA GATTGCGCAT CGGATCAACA CGATCATAGA TAGTCACCGC
GTGCTTGTCA TGTCTGAAGG CCGGGTGGCA GAGTACGATA CGCCGCAGGT ACTCATGCAG
AGGCCTGAAT CGTTGTTTTT CTCCTTGGTG CAGGAAGCTG GTCTGGAGAA CGCAATCTAG
GTAGTTGCAT CATGTA
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| Protein sequence | MTAQAAFEAF ASKHTRPYDC TFPPKIVSSH RDLDFTQCFE HAVLLPAPLA FFTLLALSQI
LRITRQLKKG GLNGGLAWIT RSRRSERICS TKVGFLAASA VFSLVSLCLT FKNISVNLLS
AAHYLLLFVT LLSLIHLTAL NHHTSRTSST IILLFYPTYL LVFAIRLRTM IVSGALNSGL
THSTSGRLLL ARQAFWFASI IAALPAFLLE LYSPEKKWQR WNAPWKRNGK IALEDDEEEE
ADGIENLDGQ GAVPGKNAYG DVESPVSTAN IYEILTFSWL TPLLSLGTRK YLGEEDMWAL
PSEDSAEALS NRLAETWKSQ AEQVKAGKKK SASLKIALVK AYGGPYIVAG ILKALYDMIN
FLQPQLLRLL LNFVSSYTSE RPMPPVTGYA IAVLMFISAN VGTAVLHQYF QRCFTTTMRI
RGGLVTLIYR KALVLSNGEK SGRTTGDIVN LQSVDAVRIA DVCQYGHIAW SGPFQILIAF
ISLYRLVGWQ AFMGVAVMVV SLPANTLISR FNKRYHRRLM KVKDTRTRTM NEILNNIKSI
KLYGWEQAFA NKIYDIRNNQ ELKMLRKIGI VMAGSNFIWQ GTPFLVAFST FATFAFTSDK
PLTSEIIFPA ISLFQLLSFP MAMFANILNS IIEASVSVGR LESFLAADEL NPNARTVIRP
SEDPQGEPQK GDTVVSIKNG EFRWLEGSTE PILQDIDLEV KKGELIALIG RVGDGKSSLL
GAILGEMTRS DGSVTLRGEV AYFSQNSWIL SATVKDNIVF GHRFDKQFYE QVLDACALRQ
DLAVLPSGDM TEVGEKGVSL SGGQKARICL ARAVYARADI YLLDDPLAAV DSHVGRHIFD
KVIGPNGLLA SKARILCTNA VTFLPQADQI ISLRRGIVLE RGTYEEAMND SSSELYKLIT
GLGKQSAMGD GQDSGQGSGA TTPTVVGQEE VVVVEEPEGV EDSEEAEIVT GADSPKQRKA
YRQLSRDIMR RSSVVSLRTA KRDALRDLRE SAKPKERSEK GNVKREVYRE FIKASSKWGV
AVFIGAMSLA QGLNILSNFV LRAWASANSD SSGEMPSVTK YLLIYGIVGI SGSVANVVSV
ATLKIVCALK SSRSLHDRSF GALMKSPLSF FELTPTGRIL NLFSRDIFVI DEVLIMALGG
FFRTSVSVLG TVVVIAMGTP LVLLVFIPLG YLYRIVMRFY LATSRELKRL DAVSRSPVFS
FFGETLSGLP VIRGYGQSAR FIANNEARVD RNQACFMPAM TINRWLAVRL EFLGSCLMFS
TALTSVAALI MSNSVDAGLV GLLMSYTISV TGTLNWLVRS ASEVEQNIVS VERVLGYANL
DSEAPDFIPE TKPASTWPQE GSIEFDHFSM KYRPELDFVL RDVCIKINGG ERVGVCGRTG
AGKSSLTLAL FRIIEAAGGK IFIDGVDIST IGLHDLRTIV SIIPQDPQLF EGTLRNNIDP
TESASDADMW RALEQAHLKD HVMNNMGGSL DAEVSEGGSN LSAGQRQLLC FARAMLRKTK
ILVLDEATSS IDLETDEAVQ QILRGPDFKD VTTITIAHRI NTIIDSHRVL VMSEGRVAEY
DTPQVLMQRP ESLFFSLVQE AGLENAI
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