Gene CNC04990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC04990 
Symbol 
ID3256830 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1503521 
End bp1504455 
Gene Length935 bp 
Protein Length224 aa 
Translation table 
GC content48% 
IMG OID638255717 
Productproteasome subunit beta type 2, putative 
Protein accessionXP_569789 
Protein GI58265266 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.846923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTGCT CATTCGGTAT TACTGGTAAG TGTGGCTACG GCACAAACGG TATCTAATGC 
TGATATTTCC CTATCATAGG CAAAGACTAT GTCATCCTCG CCTCAGACAT GGGCGCGGGA
CGATCCATCG TCCGTATGAA GTCTGACGAG AACAAGCTCA AGACCTTGGG CCCCCACCTC
GCCATGGCTT TTAGCGGTGA ACCCGGAGAT ACAAACAATT TTGCCGAGTA TATCGAGAGG
AATATGCGAC TGTACAACAT CCGGTAAGTC CCTGCGCCCG TGTTATATGT AACCTCAAGA
GTTATCTTGG AAGAACTGGA CAGAGTTGAT TTTTTTGTTT TTCTGATTTG GGTTACTCGG
CAGAAACCAT TTCCCGCTTC TTCCACCAGC AGCCTCCGCT TGGGTCCGAC GTACTCTTGC
AGAAGCTATT CGATCCCGAC ACCCCTATGC TGTTAACCTC CTTCTTGGTG GGTTCGATAC
CACCACCTCA AAACCCCACT TGTACTGGAT CGATTATCTC GGTACCAAGG CGATTGTCCC
TTATGCTGCG CATGGTATGG GTGTGTATGT TAGTTTGAGT ACGATGGATA AGTGGTGGTA
CGAGGATATG GACAAGAAGG AGGGTGTCGA CTTGTTGAGA AAGTGTATTG ACGAGACGGA
GAAGCGTGAG TCTAAATTAC CCGAGGGGCC GTCTGTTGCG AGTTATTAAA GTACCTATCA
GGTCTCACAA TCAAGTTCGA CTTTAACTGC ATCCTCATTG ACAAGAACGG TATCCACAAG
GTTGACCTTT CCCAAGCAGA CCCCATCGCC AACATCCAGG AACACCCACA AGAAACCGAG
GTTGAAGCGC CTCATCCCCC CATAGAAGTT GGTATATCCG CCTAAGGTGT TGTGTATGGA
GCAATGCAAG TAGTTGATGT ATTTTATAAG AAACA
 
Protein sequence
MECSFGITGK DYVILASDMG AGRSIVRMKS DENKLKTLGP HLAMAFSGEP GDTNNFAEYI 
ERNMRLYNIR NHFPLLPPAA SAWVRRTLAE AIRSRHPYAV NLLLGGFDTT TSKPHLYWID
YLGTKAIVPY AAHGMGVYVS LSTMDKWWYE DMDKKEGVDL LRKCIDETEK RLTIKFDFNC
ILIDKNGIHK VDLSQADPIA NIQEHPQETE VEAPHPPIEV GISA