| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC04400 |
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| Symbol | |
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| ID | 3256523 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006685 |
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| Strand | - |
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| Start bp | 1331644 |
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| End bp | 1335554 |
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| Gene Length | 3911 bp |
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| Protein Length | 1054 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638255661 |
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| Product | ATP-dependent DNA helicase hus2/rqh1, putative |
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| Protein accession | XP_570014 |
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| Protein GI | 58265716 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0273151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGATG CCAAGCCTAC GTCATTGGCT GTTAAGGATT ATCCTACTCC CACCGCTGCC
AGTTCATCTA AAGCCAAGCA CACAACCCTG GACAATTGGA ATGCCAGTCG GTCGAATGGA
GTACCGAGTG ATGATTCTGA TATGCCTGTG ACTAGTGGCT CTTTACAACT TAATCGGGAA
TATCCATCTC CTGCTGTTGC TGGACCATCG CGGCCCACAT GTAGGCGACC TAGTCCGCCG
CAAGATGTTC CACAGGATCT TCACGACTTT GATATAGCCA TGGCTGAAGA AGATTTTCAC
GATCTCGAAG AAGAGCCCGT TCTCGTTCCT CCATCTACTC CGCCCGTGGC TCCTTCTCCC
CGCGTACCCA CCAAAATGTC TGCACGGCAA CCGCAACCCT TATTAGCCCC TGAAAATAAC
AAGCAATCAA TTTTACAACA TACGGGACAT CTTCCAGATG AATTCCATGA TATTCCATTC
AACGAAATTT TTTCTTCACC TACGTCGCCT ACGCGCAACC TTCCTAATCC TCCAATTCGA
GCCGAATCTT CTCCGCCTAA GCCCATAGAT CCTCCCCGTG CGTCAGTTCT AGCAGGGCCT
TCAAGACAGC CTATGGAAAC GCATTCCCCA GTCAAAGAAG CCGTCCCAGC GGTACCCCAA
CATAGGGTAA TCCCACTCGA AATAACGCAC CGATGGTCAA AGGAAGTCAA CCAAAAGTTA
AGACAGGTGT TCAAGCTGCC CAATTTCAGA AAACATCAGA AAGAGGCCAT CGACGAGACA
ATGGCTGGTA GAGATGTCTT CGTGCTTATG CCTACCGGAG GAGGAAAGAG TTTGACTTGT
AAGTATTTCA AGGGGTGAAA TACGGCCAAT ACTCAAGCTT AATTATTTAG ATCAACTCCC
TGCAATCTGC TCATCGGGTA AAACTCGCGG TGTCACTTTT GTGGTTTCCC CCCTTATTTC
ACTCATCAAT GACCAAACAA GGCACTTGAT CTCTCGAGGT ATTCCCGCCA TAGCATACAC
CGGCGATCTT ACTCAAAGAG ACAAGAATTT GGCGCATGAA GAATTGTCAA AAAGGGAACC
TATCACAAAA GTGGTCTATG TGACTCCGGA AATGATGTCG ATGGGTGGTC ATATCAAATC
GATATTGCGC GGTTTGCTGC AGAGGAAGCA GCTAGCAAGG TTTGTAATTG ATGAGGCACA
TTGCGTGAGT CAGTGGGGTC ATGATTTTCG AGCCGATTAC CTGCGTCTTG GTGAGCTTCG
TCGAGATTAT CCAGGCGTAC CAATCATGGC TCTCACTGCT ACTGCACAAA ATAAAGTACA
AGAGGACATC ATTCGCTCTC TGCGTATTGA AGGATGCGTT TGTTTGCGCC AGTCTTTCAA
TCGCCCCAAT CTTCATTATG AGGTCCGTCC CAAAACCAGC TCAGTAATAC AAGAGATTGT
GGCCTTTGTT CATACACAAG AAGCCCGGGC AAGTGGCATC GTTTACTGCA ACTCGAGGGA
CAACTGCGAA AATTTGGCGA AGAAACTAAG AGAAGATCAT GGCCTAAGAG CGTATCATTA
TCACGCGGGA ATGACAAAGG AGAATCGGAG AAAGATGCAG GAAGGTTGGC AGGACCATAA
ATTTGAGATC ATGGTGGCAA CCGTAAGTCG AATACCGTAC ACTTGAACCA TGCTAGACTT
CTTATACTGA TTCGGCCGTA GATTGCTTTC GGTATGGGGT GAGTTTGACT GGAAGTATCA
CAGGGGTCTG AACTAATCCA AGCATAGCAT TGACAAACCG GACGTGCGAT GTGGGTCACA
GATTAGCCAA CATTTTGAAT TTGTAGCTGA TATACTGTTC ACAGACGTTA TCCATCACCA
TCTGCCTAGA TCTCTCGAAG GGTATTACCA AGAAACTGGT AGAGCTGGGC GTGACGGCAA
TCCATCGACT TGCATCCTGT GTGAGTATAT TTTATCATAC ATGTTTTCAT TTTTTTTCGG
CTGATGTGGA CCTTTAGATT ACTCGTTCAA AGACGGCAAG AAGATCCTCG GTCAGATTGA
CCAAGAAAAA GATCTCACGC GCGACCAAAA GGAGCGACAA AAGGCAAGCA TGCAAGAGGT
TCTTCGTTAC TGTAACAACA AGGTCGATTG TCGTCGTTCC CAGGTACTCG CATTTTTCAA
CGAAACTTTC GATGCTGCCA ACTGCAATCA AGGATGTGAT GTCTGCCTTG GCCGGGATCG
GAATGTCTTC AGGACAGAGG ATGTGACAGA CGATGCGGTA ACGGTCATCA AAATGGTCCA
GGCGTTTAGC AACACCAAAA TTACAATCCT AAACGCTGCC GAATGCTTTA GAGGCTTCAA
AGGAAATTCA GGCAAACAGT TAAATCAAAA TCCGTACTTC GGCGCCGGAC AATCTTGGGA
CAGGAACGAG GGAGAGAGGC TGATCCAGAC ACTTGTCATC GAAGGGGCTC TGGAAGAATA
CTGTGTGGAG TCGAAGGCGG GATGGACCAA TGCATACTTA AGAGTGAGTC AACTACTCTT
TCTCTCTCAT TCTTTCACTT CCCTTGGGCG TTGTAAAATA ATGTGTACGC TTATATCCTG
TGATCTAGGT GGGCAAAGAG GGCTACAAAT ACTTAAATGG TACTGCTAGA CTCAAGATGG
ATTTCCGTGA GGCGTCTCCT CGCAAATTGA CAACGAAACC CAAGCAGTCC GCCAAGCGCC
GATCGGCGAA ATCCAAGGGC CCAGCTACGC TTGAGAAAAC AACCAATTCT AATCCCATTG
CACGTAAGCG TTCGCTGCAG CAAATCATGG CGGAGGAGGC AGAGTTCGAT AATTCACATT
GGGGTGACAC TGATGATGAG TACAATCCCG AAAACGATGG TGACCCTATC ATAGCCAGTG
GAGATGAGAC AGAAATGGAC GATGACGTAC CGTTGAAGAG AAGAAAGTCA ACGGAGGCTA
GCAAAGAAAA GACACCAAGA AGTACTAGGT CAAAAGCGAA GGAAGCCACT CATGATAATG
ATGGCGAAAG TTCGGTGGAG CAGTGTTTCA AGGCTTTAGA GAAAATGCGC AATCAGGTAT
GCGAAATATT TCTGGGTCCA GGAGGCAAGG AGTAAGCTTA TCTGTTATGT ATTTCAGTCG
GTCGCCAAAA ATAAGACTTA TCCAGTCCTG ACCGATGAGT TGCTTCAGAT GGTAGCGGCG
CTGATGCCTG CTAGTAAGTT GCCCAGTGCT CTTCACTCAG GATTATGTGA AAGCTGACAT
TCTGCGTAGA CGAGAAAAGA CTTCGGGAGA TCGAGGGAAT GACTCCTCAA CTCATTGAGG
TATTCTCACT GTATTGCTAA GTGTGGGCCA TGAACTGATC AATGCCTTGC CTCATAGGCA
TACTCTACCA AGATCTTGGG CATCTGCATA AAGTTTCGAC CTGCCAATCA GAACCCATTG
AACACTGCCG CCCATAAAGA TGCTCTTCGC CCATCTGCGA TGCCTGCCCC CGTCACGTTA
CCTCGAACCA AGTCAGTTTC TTACCTCTTC AACCTAATAT GCTATGCTGA TTGTGCCTCT
TCATAGCTCT ACAACCATGC AGCGGATCAA ACAATATGCG TACGAACCTT CTTCGGCGTC
CAAAACCCCC CTCACGTCCT CAGCGGTTCG GAGACCTTCA AGTACAAGTT CCCTTAAACG
GCAAACCCTG CTTTTCTCTA CGTCATCAAA TACTGTTGGT AACGGCGACA GCGCGACTCC
TACAGCTGCC AAAAGACATA ATAATGTTGA TAGTGTCCGC CCGATGTTGA CAGCGAGGGG
TGGTAATGTT GTTAGCAGGA AAGACAAGTT TTGAAGTGGT TTTGCCGTGC GCGGCTATAC
TTGCCTTGTA TCAAACTGTA TTGCTGAATA ATTTATATAA TGGATGATAA CCGCCATATT
AATACCACCG A
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| Protein sequence | MADAKPTSLA VKDYPTPTAA SSSKAKHTTL DNWNASRSNG VPSDDSDMPV TSGSLQLNRE
YPSPAVAGPS RPTCRRPSPP QDVPQDLHDF DIAMAEEDFH DLEEEPVLVP PSTPPVAPSP
RVPTKMSARQ PQPLLAPENN KQSILQHTGH LPDEFHDIPF NEIFSSPTSP TRNLPNPPIR
AESSPPKPID PPRASVLAGP SRQPMETHSP VKEAVPAVPQ HRVIPLEITH RWSKEVNQKL
RQVFKLPNFR KHQKEAIDET MAGRDVFVLM PTGGGKSLTY QLPAICSSGK TRGVTFVVSP
LISLINDQTR HLISRGIPAI AYTGDLTQRD KNLAHEELSK REPITKVVYV TPEMMSMGGH
IKSILRGLLQ RKQLARFVID EAHCVSQWGH DFRADYLRLG ELRRDYPGVP IMALTATAQN
KVQEDIIRSL RIEGCVCLRQ SFNRPNLHYE VRPKTSSVIQ EIVAFVHTQE ARASGIVYCN
SRDNCENLAK KLREDHGLRA YHYHAGMTKE NRRKMQEGWQ DHKFEIMVAT TLSITICLDL
SKGITKKLVE LGVTAIHRLA SCKILGQIDQ EKDLTRDQKE RQKASMQEVL RYCNNKVDCR
RSQVLAFFNE TFDAANCNQG CDVCLGRDRN VFRTEDVTDD AVTVIKMVQA FSNTKITILN
AAECFRGFKG NSGKQLNQNP YFGAGQSWDR NEGERLIQTL VIEGALEEYC VESKAGWTNA
YLRVGKEGYK YLNGTARLKM DFREASPRKL TTKPKQSAKR RSAKSKGPAT LEKTTNSNPI
ARKRSLQQIM AEEAEFDNSH WGDTDDEYNP ENDGDPIIAS GDETEMDDDV PLKRRKSTEA
SKEKTPRSTR SKAKEATHDN DGESSVEQCF KALEKMRNQS VAKNKTYPVL TDELLQMVAA
LMPANEKRLR EIEGMTPQLI EAYSTKILGI CIKFRPANQN PLNTAAHKDA LRPSAMPAPV
TLPRTNSTTM QRIKQYAYEP SSASKTPLTS SAVRRPSSTS SLKRQTLLFS TSSNTVGNGD
SATPTAAKRH NNVDSVRPML TARGGNVVSR KDKF
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