Gene CNC04270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC04270 
Symbol 
ID3256283 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1295481 
End bp1297931 
Gene Length2451 bp 
Protein Length647 aa 
Translation table 
GC content50% 
IMG OID638255648 
Producthypothetical protein 
Protein accessionXP_569679 
Protein GI58265046 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0242249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGGACAACG CTGCAAAAAG ACCCCCAGCA CCACCCCAGC CACCCGTATT CCCCCACTAA 
AACGTCGCCC CAGAAGAATT CATGCACAAA AATGAGACAA CCAGCCATCC ACCGCCAGAA
ACTACTAGCA GTACTATCCA CCAGGCCCTC CCTCCAGACA GCCTGCAAGA CCACCCCGAT
ACCCACCCTG TGAACCCCCT TGGTCTCTTC ATCCGCCCGC ATCCAACGCG CGGCAATGGT
CTCTTTTCGC CCCGCCCGAT TCCAGCGGGC ACTGTCGTCG AAGAGTCTCC CGTCCTAGTC
CTTACCAAGG AGCAATGGGA ACAAGGCCAG ATGGACGGGA CAATTTTGGG AGAATACGGG
TTTTGCTGGA GTGCAGGCGG GATGGCTATT GGACTTGGAT TAGGTGAGTC CCCAATTATT
TGCATGACAG AGAGGCATAG GCATTGAAAG GAAATGTAGC TTCACTGTTC AACCATTCTT
CCAGACCCAA CGTCAACTTT ATCCGTTCCC CTTCCACAAA AACGATACGA TTTGTGACTG
CCAAGCACAT ATCACCAGGA GAGGAGCTCT GCATTTGCTA TACAGCCGAT GAGTCCAAGC
TTTGGTTTAC TCCCGCGAGA GGAGAGGAAG AGGACGAGGT GCTGGGCGGG GAGAGCGAGG
GTGAAGGCGA CGGGTTACCT GACGACGTCG ATGGGCTGGT GGAGGATGTG CAACAAGCAA
AATTGAATTC CTCGGAACCA ACACTTCAAG CTCCTCGTCC TGTACACATT TCTTCTTTAC
CTTCTTACCC ATCTTCCTCG TCATCTTCTC CTGCACCTCA ACATACAATT CCTCCCTCGT
CTCTCCCTGC CCCTTTACAT TCGTCCGGGC ACAAAGCGTC GGGCCAACGT CACCTTTCGA
AGCATCGACA ACCGGCTACT CTGGTTGACG ATCTTGCTTG GCAGGAAGAC GAATGGAAAG
ATGAAAAGGG AAGGGATCAT GTGGGTGAGG GAAAAAAGGC GGGAGAGGAT TGGGGCGAGG
TTATTCGAGT GAAGGGCCCC GCAGAGCGAG AGAATGACGG GAATGACAGA GAGTTGAGTA
AGTCCATTTT GTTCTCGTCC GATATGGACT GGGAAGCGCT GACTCGGTAT CAGTGCAAGT
CTGGATATTA GAATTTTCAG ACGCCAAGTT GACAAAGACG GCTCTAAAGT GGGTTACACT
ATTGATCACA TAATCGAGCT AGTAACTGAC TGACTGCTTT GTAGTTTTTC CAAAGAGATT
TGGCCCAACG ACGTCAATGA ACGGTTACGA CACCTCAAGA GAGTCTGTAG GCGTAACGAA
GATGGCAAAG GTATGAGCAC TAGTCAGGCA TGAAAACGGT CGAACCTGCT GACAGATACA
TGTAGAAATA TGCAGAATAG CGCTCTGCCC TCTTGACGAA CACTCTGCCG ATTCCCTCTC
TAGTCTCATG ACCGCTTTCT CCCCTCTTCT TTCGTCTCTT ACGCCTAAAT CTTGGTCTGT
CCCATCTTCG GGTGCTCGCA CTCAAGAGCA ACTCAAGTGG AAGCACCACA TTTGGCCTGT
ATCCTTTTCT CCAGCTCCCA TAATTCCCGC CGATTCGTCC TCGTGGCCAA TCTCCCGTAA
GGCTTGGGTT GCAGCAGGTA TCAAGCGAGT CTTGAAACTT GCAGTCAATG CAAAACAGAA
AAGCGAGCTT CCAGTGGCCA CTTTTTGTAC GTCTGCACCC CCCTGTTTTT GGCCGACAAT
GGATGGTTTC ATCCCGCCTA CCCTCAACCT CCGGGCTTCA TCCTGTGATA CTCGAATTTC
TGAATCTCAT CCCTTGCGGC ATGCCACTCT CAATTGTGTT GCCTCCATTG CTCACCTTCG
CACTGTGCCA CCTTTTACAG ATGTTCCCCC TACAAGGAAC GGCGCGGATT ACCTGCTGAC
AAGTCTGAGC TTATTTATCA GCCATGAACC TTGTGTAATG TGTGCAATGG CATTATTACA
TTCTAGAGTT CGAGAAGTTT TTTATGTTTT CCCCAGGAAA AAAGGGGGAG GTTTTGAATA
TAACGAGGGT AATGAATATG GGGAGGGGTC CCCAGTGCAT CAACATGATG AAGGAGCAGG
TACACGAGAG GATATAAGTG GACAAGGAGG ATTTGGGATC CACGCCAGGA GGGATCTCAA
CCATAGATTT GAGGTCTGGA AATGGAATGG GCATGTCGAT GAGGATGTCA GGAAAGAGCT
AGAGATTGAC GAGAACCTCC AACTGTAGTC TGTTTTGCTT GCGTGGTCAA GAGGGAGAAA
GGGAAGGGAC TTGCTCCAGT CTCGTTCCTC AAGACTTCTG GTGATGTTCA GTTGTCTTTT
GGAAAGCATC GAGTACCCAT CATTCCTTTA TGTAGCTGTC TTTCGTCTCC CGTCCATCTG
CTTTTTGGTT GTTGGAGAGG TATATAAGGT ACATCATATG ACACACACCA G
 
Protein sequence
MHKNETTSHP PPETTSSTIH QALPPDSLQD HPDTHPVNPL GLFIRPHPTR GNGLFSPRPI 
PAGTVVEESP VLVLTKEQWE QGQMDGTILG EYGFCWSAGG MAIGLGLASL FNHSSRPNVN
FIRSPSTKTI RFVTAKHISP GEELCICYTA DESKLWFTPA RGEEEDEVLG GESEGEGDGL
PDDVDGLVED VQQAKLNSSE PTLQAPRPVH ISSLPSYPSS SSSSPAPQHT IPPSSLPAPL
HSSGHKASGQ RHLSKHRQPA TLVDDLAWQE DEWKDEKGRD HVGEGKKAGE DWGEVIRVKG
PAERENDGND RELMQVWILE FSDAKLTKTA LNFSKEIWPN DVNERLRHLK RVCRRNEDGK
EICRIALCPL DEHSADSLSS LMTAFSPLLS SLTPKSWSVP SSGARTQEQL KWKHHIWPVS
FSPAPIIPAD SSSWPISRKA WVAAGIKRVL KLAVNAKQKS ELPVATFCTS APPCFWPTMD
GFIPPTLNLR ASSCDTRISE SHPLRHATLN CVASIAHLRT VPPFTDVPPT RNGADYLLTS
LSLFISHEPC VMCAMALLHS RVREVFYVFP RKKGGGFEYN EGNEYGEGSP VHQHDEGAGT
REDISGQGGF GIHARRDLNH RFEVWKWNGH VDEDVRKELE IDENLQL