Gene CNC02010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC02010 
Symbol 
ID3256461 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand+ 
Start bp559349 
End bp560455 
Gene Length1107 bp 
Protein Length281 aa 
Translation table 
GC content48% 
IMG OID638255422 
Productexosome complex exonuclease rrp45, putative 
Protein accessionXP_569460 
Protein GI58264608 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2123] RNase PH-related exoribonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAGAG AGATAGACCC ACCATCAGTC CAGAACGAGT TTCTCCTCGC CGCCTTGGCC 
GAGGGGAAAA GGCTTGACGG CAGGCTACCC CTTCAGATGC GGGACGTCCA TTACATTTTT 
GGAGATGAGC TTGGCTGTGT GGAGTGTCGC TTGGGGAAGA CAGCGTAAGT GGCTACGCCC 
GACAATATGG CAAAAATTTG TGCTGGATTA ATTCGTGCGT TCAGTATACT TGCTCAAGTG 
TCGGCGACAA TTGTCAAACC GCGAGATGAC AGACCCTATG AAGGATTTCT ATTGATCAAC 
TCTGAAATCG GACCTATGGC TAGCAGTGTT TATGAAAACG GAAGGTATGT TAGCATGCAT 
TGGTCTAATG AAATATCTGC TAAATTTTCC TGGTAGACCC GGTGACGATG AAGTCATGAT 
TGGGAGACTT CTAGAGAAGA GTATCCGACG TACTGAAGCC ATTGACAGAG AAGCCTTGTG 
CATTCTTGCA GGCGAAAAGG TAAAGGCTAA TCGCATGACT ATTAGATTTT ATTTCTGACT 
AGGCTTAGGT TTGGCAACTG CGCCTCACTT TGCACTTTCT CTCGGATTCA GGCAATCTCC 
TTGACTGTGC CGCTCTTGCA GGCATGGCAG CGTTGAAACA TTTCAGAAAA CCGGATGTAG 
AAGTTATTGG CGACGAGGTC ATCATAGTTG GTACTGAGTG GCAGCCCAAT GTGACCCAAT 
GAAACTGATG TGTAACAGCA CTCACCAGAG GAGCGAGCTC CTGTGCCATT GGCCATCCAC 
CATACACCCC TATGTCTCAC GTTTGCCTAC TTTGAAAAGT AAGAATTCTC ACTTCATTCT 
CCTGTCCTTA TCTGACGGCT TGCAAGTCTC CCTCCAATCC TTGACCCCTC CCACGTCGAA 
ATGATGCTTT GCTCGGGCAC ATTAACCCTT ACGCTTAACG CACAGCGAGA GATCTGCGTC 
CTTTCAAAAG CTGGCGGGGC CCCTCTCGGC GCCGAAGAAA TTATGGGCGT CGTCAAAGTC 
GGTGTTGATA AGGTCAGAGA ATTAGTGAGG CATTTGGAGG AAGAGCTAGA AAAGGACCGT 
ACGAGCAGAG TTGTTGAAGT ACGTTAG
 
Protein sequence
MVREIDPPSV QNEFLLAALA EGKRLDGRLP LQMRDVHYIF GDELGCVECR LGKTAILAQV 
SATIVKPRDD RPYEGFLLIN SEIGPMASSV YENGRPGDDE VMIGRLLEKS IRRTEAIDRE 
ALCILAGEKV WQLRLTLHFL SDSGNLLDCA ALAGMAALKH FRKPDVEVIG DEVIIHSPEE 
RAPVPLAIHH TPLCLTFAYF ENLPPILDPS HVEMMLCSGT LTLTLNAQRE ICVLSKAGGA 
PLGAEEIMGV VKVGVDKVRE LVRHLEEELE KDRTSRVVEV R