Gene CNC01890 details

Gene Information

• Locus tag: CNC01890
• ID: 3256691
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: -
• Start bp: 511749
• End bp: 515213
• Gene Length: 3465 bp
• Protein Length: 918 aa
• GC content: 52%
• IMG OID: 638255409
• Product: Na+/H+ exchanger AnNHA1, putative
• Protein accession: XP_569560
• Protein GI: 58264808
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.523951
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTAATCCCAT CGCGAAGCCG CCAGATCCCT TCCCCTTCAT TTGAACCGGC AATCCAAGGG 
CGCGCTCTGC CACTGCACAA GGACAACCCA GTAGAGGCAT GCCGACCGCC ACCTAAGCTT 
ATATATATAC CTGCTGCCCT ATTCCCCCCA CTCGTATCCC GCTGGCTTCT GAATCACAAT 
GACTGCTTTC CACCCCTTTG AAGTCACTGC CCCCCATCTC GCATACACTT TCCTCGGCGG 
CTTTGTGGTC ATCTTTGGCA TGGTCAGTTT GTTTGTCAAG GAGAAGCTCT ATGTCGGCGA 
AGCACCTATA GCGACTGTAG TCGGTATCAT TATTGGTCCC CATTGCCTCA ATTTTTTCAA 
TCCTGCAGGA TGGGGTAGCG GTACTCAGGA GGTCGCGAAT GACATTACAT TGGAATTCAC 
TCGCGTTGTC ATTGCTATAT CCGTGTTTGC CGTCGGCGTT GAATTGCCCA AGGTACGTGA 
TAGCTTATGA TTCATTTGAC TGGGAAACCG CTGACTTTGG TGCTTGGCAA AGGCGTACAT 
GAAGCGGCAC TGGCGATCGC TCTTCTTCCT TCTGGGCCCG TGCATGGTGT GGGGATGGAT 
GGTCTCCGCT CTCCTCATCT GGGGCCTGAT ACCGGACCTA ACATTTCTCG CCTCGCTCGT 
GGTTGCGGCG GGCGTCACCC CTACAGATCC CATCTTGGCC CAGGCAGTCA TCGGAGGCAA 
GTTCGCCGAC AAACACGTTC CCGCCCACAT CCGCCACCTC CTCTCCGCAG AAAGTGGAAG 
TAACGACGGG GCCGCCTTTC CCTTCCTGTA CATCGCTCTC TACCTCCTAC TCGATGCAAG 
CCCAGGCCAT GCCGTCGGAG AATGGTTCTA CATGACTTGG TGCGTAAGCA AACATTGAGA 
TCCTCAGTTA TCGCTGTTCT TTTCGCTCAT ACGCACTTTC TAGGGCCTAC GAGATTATTC 
TTGGTATTGT CATCGGGGCC ATCCTGGGAT TTTGCGCGCG CAAGTTCATG AAATTCGCAG 
AGCGCAAACG TCTCGTTGAT AGGCAGTCTT ACGTCGCCCA GTATGTCAGT CTGGCAGTGC 
TGTCCATTGG TAAGCGTCTT GACCAGCCTC GCGATTATTC AATACCTGAC CACGGTGTAG 
GCGTTACAAG TTTGCTCGGC AGTGACGATT TGCTTTCTGC TTTCGCTTGC GGTTGTGCTT 
TTGCATGGGA GTACGTAGTG CTTGTGATTT ATCTCTTTAT TGCGCTGACG ACAGTTACAG 
CGGTTTCTTC AACAAAGCTA CGGAGGACGC GGTGTTCTCG AACGTTATTG ATCTCCTTTT 
CAATTGCGCC GCCTTCATCT ATATCGGCGC TATCATTCCT TTCAATCATT TTAACGATCT 
GCCCGATGTA CGTTCTCATG GATTACCACA TACACGAACT AACTGGATCC CAGCTCCGAG 
TATGGCGATT GGTTGTGTTA GCTATCCTCG TCCTTCTAGT TCGTCGTCTG CCTTCTATAA 
TAGTATGTTA CAAGTTCATT CCCGATATCA AAACGTTCAG AGAAGCTCTT TTTACGGGAT 
GGTTCGGTGA GTTTCTTATT GCAAGTGTCA GTTGGGTCAT GTCTGATGAG AGTTTAGGGC 
CTATGGGTGT CGGTGCTGTA TTCATCTCCA CGCTTGCTCG GTCGTCTTTG CCAGAGGGGG 
AGCCTGAGCA GAATACAGAA GCAGTTGACC GCCTAAAAGA CGTCATCATG CCCGTCACCT 
TATTTCTTGT GTTGTCTTCG ATCGTAACTC GTAAGTCTAT CCCATCGCAT ACGTTACTGA 
TTCAGTGTAG ACGGCATGTC AATTCCATTT TTCTCTCTTG GTCGACGGGT CCATTCCATT 
ACTTATACTC GATCACGAAA TCTTTCCATG GACACGCGGG GCGACGAGCC TGCCTGGACA 
ACTCATGCTC GGCGTATTAT TCCAGGCCAG GAGATCATTG TCAATCGTGA TGACGACGAA 
GAAGGCGATT TAGGTGTCAG ACGGAGGGAC ACACTCACCA GCGATTCAAA TGGTCGTATC 
ACGGAAAAGA TTGAGGAAGA AGATAGCGGA GAAAGCGGAG AAAGTAGCTC ATCCCGAACA 
AGGCAGGGGG AAATGATTGA AATGATAGAA AAACGTGGTT CGTCTCGTCA TGGTAGCCAG 
GCCAGCCAGG GCGAAGCGGC GGAGGAAGGA GAGAGGTGGA GAAGTTCGAG AGGAGGAAGC 
CCTGATCTCG CAAATGACCC TGAGACACAG AGAGAGATTG AAGAGGGAAG AGAAGAGATC 
GAAGATAAGG AAGGAGCTGG TAGAAGAACG CCTCCGCTGG CCAAATACAG AGAAGGAAAC 
CACCTCATTG TGGAGAGGAA AATCAGGGAC AGTGACGAGG TATGCTATGC GAGTGTTTCA 
ATTGCTTATC ACGACTTGCT CATGCGTATG CTTTTAGGTT GAAGTCGAGG TCATCCGAAA 
TCATTTCGCC GAAAATAAGA AAACGGAGAG TGACCGCTTC AATCATCCCC ATCGCCTCAA 
GTCACGAGAG CTTGACGACT TGCTTCATCA CCTGCCCAAA AGCCTCGAGC ATGCTACTTC 
ACGGGTTCAG GATGGCGGCA AAGATGCAGT TGATCGTCTC GGTCTGGGGC TGATGGGAAT 
TAGAACTCCG GAACCGTCAC CCCCAATTGA ATCGCACGGC GACTCAAGAC ATGATCATGG 
CTATGGCTTG GAGAGGACGC AGAGTCCAGA GGGTCTTGCA GGGGAGGGCA GGGATACCGA 
GGGCGGGGGC GATGTGTCCC ACGGGAGTGA TTATGAAGAG GACGAGGCCA ACTATGAGGA 
TGTCCCGGAC GAGACTCCCC GGCAAAGGAG GAAGAGAATG AAACCACCAG CAATTGTCGT 
CTCTCGGCAG AACAGCGCTG GGCCTCCAAA ACGATCCATC CGCTCCAGGC TGTTTGGCCG 
ACGACAACAT TCTTCCAATT CGCCTTCCCG TGCCGAAGAA GGCTTGGCCC CTCCCAATCA 
TTCCCTTCTC GCTCCATCCT CATCCCGTTC GCGTCCTCGG AACATTGCTG CAGAACCGGA 
GTCCATACTG GCAGAGGATT CGCGCGGAGT ATCCTCACCT TCCCAACCGC AAAATCTTGC 
GATCCCTCTC ACAAGGACCC TTTCAGCTAG CCGATCGTCG CCTGCGGTAC GCTTCGCCGA 
TGATGCCAGT CCTTCGTCCG AGACAGCGCC TGGCCAGTCA AATTATGGCT CCAACGCTCC 
AGGTTTCAAG AAGAATCCCG CTTTAGCCAT GTATCGGTCG GCCAGTGTAC AAAGTACAGG 
GTCCAACAAG GATGGGCCTA GCGTCTCTTT CAAAGAACCT GAAATCAAGC GTTAAGATGG 
CAGGTTGGAA TCGTAGTTTT GTGTAACGAC AGCATTTGCA TTGACTTTGA AGCATTTACC 
GTTTTTGTAT CTAAGGAGTT GATTTGTCAT GTTCTCATCT CTTGC 

 

Protein sequence

MTAFHPFEVT APHLAYTFLG GFVVIFGMVS LFVKEKLYVG EAPIATVVGI IIGPHCLNFF 
NPAGWGSGTQ EVANDITLEF TRVVIAISVF AVGVELPKAY MKRHWRSLFF LLGPCMVWGW 
MVSALLIWGL IPDLTFLASL VVAAGVTPTD PILAQAVIGG KFADKHVPAH IRHLLSAESG 
SNDGAAFPFL YIALYLLLDA SPGHAVGEWF YMTWAYEIIL GIVIGAILGF CARKFMKFAE 
RKRLVDRQSY VAQYVSLAVL SIGVTSLLGS DDLLSAFACG CAFAWDGFFN KATEDAVFSN 
VIDLLFNCAA FIYIGAIIPF NHFNDLPDLR VWRLVVLAIL VLLVRRLPSI IVCYKFIPDI 
KTFREALFTG WFGPMGVGAV FISTLARSSL PEGEPEQNTE AVDRLKDVIM PVTLFLVLSS 
IVTHGMSIPF FSLGRRVHSI TYTRSRNLSM DTRGDEPAWT THARRIIPGQ EIIVNRDDDE 
EGDLGVRRRD TLTSDSNGRI TEKIEEEDSG ESGESSSSRT RQGEMIEMIE KRGSSRHGSQ 
ASQGEAAEEG ERWRSSRGGS PDLANDPETQ REIEEGREEI EDKEGAGRRT PPLAKYREGN 
HLIVERKIRD SDEVEVEVIR NHFAENKKTE SDRFNHPHRL KSRELDDLLH HLPKSLEHAT 
SRVQDGGKDA VDRLGLGLMG IRTPEPSPPI ESHGDSRHDH GYGLERTQSP EGLAGEGRDT 
EGGGDVSHGS DYEEDEANYE DVPDETPRQR RKRMKPPAIV VSRQNSAGPP KRSIRSRLFG 
RRQHSSNSPS RAEEGLAPPN HSLLAPSSSR SRPRNIAAEP ESILAEDSRG VSSPSQPQNL 
AIPLTRTLSA SRSSPAVRFA DDASPSSETA PGQSNYGSNA PGFKKNPALA MYRSASVQST 
GSNKDGPSVS FKEPEIKR