| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC01470 |
|---|
| Symbol | |
|---|
| ID | 3256187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | + |
|---|
| Start bp | 403478 |
|---|
| End bp | 406044 |
|---|
| Gene Length | 2567 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638255366 |
|---|
| Product | GTP-binding protein, putative |
|---|
| Protein accession | XP_569478 |
|---|
| Protein GI | 58264644 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1161] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TATCTATACA CAGAAGGATA ATTTATAATG GTGAGTATAT GATCTATGAC TCACTGATGC
GTAGCCTTCA CTGATCCTTA CACAGCCGCC CCGAACAAAA GTTCAGTCTT CCGGACTCGG
TAAAGCGCTG ATCAATCGCA AAGCCAAGGA AGCAGTTGCA CCTAAGGAGT CCCAGCTTGT
ACGTGTGGTA TCTAATCTTA GCATGCCTGA TTCCTGATTA TCTTTAATAG TACACCCTTG
ATGACAACAA TCCTTTGGCA TCCGTCACCC ATGAGCGCGA TCTCGACGAA TTTCTGGCCA
ACGCTGCTCT GGCAGATCAA GATTTCACAA CCGAACGTAC CAAGCTACGA GTGATATCTG
CTCCTAACAT GCCTACGCCA TCTACCAATC CATTTTTGCT ATCCGCTGAA GAGGAGAAGG
AAGTCACCAA GAAGAAGAGG GATTTCCAGG GGGATTTGAC TGTGCCTCGA CGACCGCCTT
GGACAAGGCA GATGACAAGG TTGGAGTTGG AAAAGCAGGA ACGGGAGTCT TTCCTGGAGT
GGAGAAGAGA CATCGCAAAG TAGGTGGGAT TCCATACGGC TGTGACAATG ACTAAAAATG
ATGATACGCG ACAGGCTCGC TGAAACGTCT AACCTTTTGC TTACGCCTTT TGAGCGTAAT
GTCCAACTTT GGCGTCAACT TTGGCGTGTC CTTGAGCGTT CTCAACTCGT CGTTCAAATC
GTGGATGCTC GAAATCCTCT TGGTTTTAGG TGTCAGGATC TGGAGAACTA CGTGAAGGAG
ATCGGTAGCG ACGAAAATGA CGAAGAGATT ACCGTGGCAG GCAAAGGAAA GAGAAGAAGC
TTATTGCTGA TAAATAAGGC TGACTTATTG ACATATGATC AAAGGTTAGT GTAGGCTATT
CTTCTGCCCT CCTCTATTGC TTATCTATAT TTATTAGGTC TGCTTGGGCC GAGTATTTCG
AGAAGGAAGG CATCTCGTAC GCGTTCTTCT CCGCTGCGAA TGCTGCTGCT GCTCAAGAAC
AGGCAGAGAA ACAGCGATTA AGGCAACAAG AAGAATATGA TGGACCCAAA GGGTCTAGTG
AGGAAAATGA AGAAGAATCT GAAGAGCAGC AGGATGAGAC TGAGGATGAG CAGGATGAGA
CTGAGGAGGA GCATTTGATT AATGATCTCA GAGAAACCCA TCTCGATGAG GAAGATTGGT
CTTCAGAAAG TGCCGGAAGG AGTGGGAATG TTTCAAGGTC GGAAGTAGAC GAAAAACTTG
CCGAGGGGCA GACTCTATCT TTATCTGAAG TCGCCCAGGA TGTCGGAGCC AGGTTTGGGG
AGTCTACGGA ACAGGAAGAC GTAAGAACAA GAGTTCTCAC CGTTACCGAG CTGGAAGATC
TTTTCATCAA TGCAGCACCA GACTTGAAAG GTAGATAACA CTCATTTTAG TACGTGCGTG
CTGACAACTT TGCTAGACTT TGCCACTCCT CAGCACCCCA ATCCCAAGCT TATGGTCGGT
TTGGTTGGCT ACCCTAATGT TGGTAAATCA TCCACGATCA ACTCCCTCCT CGGTGCCAAG
AAAGTGTCTG TTTCTGCAAC TCCCGGTAAA ACCAAGCATT TCCAGACTCT TGTACTCTCT
GACACCATCA CTCTGTGTGA TTGTCCCGGT CTTGTCTTCC CGCAGTTTGC CAACACTCAA
GCGGACATGG TCGTTGATGG TGTATTACCA ATCGACCAAA TGAGAGAGTA TTCTGCTCCT
GTGGATTTGC TGTGTAAACG AATACCGAGG GAGATATTGG AGGGTACCTA TGGTATTAGG
ATTGATGTTA AGGACGAAGA AGAGGGCGGA ACAGGTAAAG TGGGGTGGGA AGAGTTCTTA
TCTGCTTATG CGAGTAAGTT GTTCAAACTC ATATCATTCA CGATGCTTAC TTGTTGATAG
TCGCTCGCGG TATGACTCGA TCTTCTTTCG GTATGCCGGA CACTTCTCGT GCCGCACGAT
ACGTCTTGAA GGATTATGTC AATGCCAAAC TTTTGTTTGC CCATCCCCCG CCGGGTATAG
ACGCCGACGA TTTTATGTCA GTCTCTCGAG CTGAAACTAT TGCACGTATC GAGGAGTCAT
ACGAGAATGG CAGAAAACGT GCACCCGTGA CTCATGTCTC GAAGAATGCC GATACTTACG
TTCAGCCTGC ATCAGCAAAG GCTAAGGATT CTCTGGATGA TGAGACAGAG CAGGGACAAG
ATCAAACTAA GAGAGAAAGG CAGTCTACTA GTAGACAGGT CAAGTCTACT GCTGCTTCTG
CTCCCGCACG TTCTGGTCGC GAGAAGGCGT CGGCCCTTGA TTCTGTGTAC TTCAATGAAA
GTGGGGCACA GCCACGTTTG GTCATCAAGG GGCGTAATCA GCCTGGTGAT GCACAGGAAG
GAGGGCAAGG ATTTTCAAGG ACTACCAGAT ATCCCCATCA GAGGTTGTTG GGACCTGACG
GGATGCCCAT TCTCGGTGCT GGAGGAAGAG ACTTGGGAGG GGCAAATGGG AAGAAGCACT
TCAAGAGAAA GGAAGGGAAA AAAAGATCCG GCAAGGGTTA CGATTAG
|
|---|
| Protein sequence | MPPRTKVQSS GLGKALINRK AKEAVAPKES QLYTLDDNNP LASVTHERDL DEFLANAALA
DQDFTTERTK LRVISAPNMP TPSTNPFLLS AEEEKEVTKK KRDFQGDLTV PRRPPWTRQM
TRLELEKQER ESFLEWRRDI AKLAETSNLL LTPFERNVQL WRQLWRVLER SQLVVQIVDA
RNPLGFRCQD LENYVKEIGS DENDEEITVA GKGKRRSLLL INKADLLTYD QRSAWAEYFE
KEGISYAFFS AANAAAAQEQ AEKQRLRQQE EYDGPKGSSE ENEEESEEQQ DETEDEQDET
EEEHLINDLR ETHLDEEDWS SESAGRSGNV SRSEVDEKLA EGQTLSLSEV AQDVGARFGE
STEQEDVRTR VLTVTELEDL FINAAPDLKD FATPQHPNPK LMVGLVGYPN VGKSSTINSL
LGAKKVSVSA TPGKTKHFQT LVLSDTITLC DCPGLVFPQF ANTQADMVVD GVLPIDQMRE
YSAPVDLLCK RIPREILEGT YGIRIDVKDE EEGGTGKVGW EEFLSAYAIA RGMTRSSFGM
PDTSRAARYV LKDYVNAKLL FAHPPPGIDA DDFMSVSRAE TIARIEESYE NGRKRAPVTH
VSKNADTYVQ PASAKAKDSL DDETEQGQDQ TKRERQSTSR QVKSTAASAP ARSGREKASA
LDSVYFNESG AQPRLVIKGR NQPGDAQEGG QGFSRTTRYP HQRLLGPDGM PILGAGGRDL
GGANGKKHFK RKEGKKRSGK GYD
|
|---|
| |