Gene CNC01430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC01430 
Symbol 
ID3256507 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp392120 
End bp394555 
Gene Length2436 bp 
Protein Length712 aa 
Translation table 
GC content57% 
IMG OID638255362 
Productconserved hypothetical protein 
Protein accessionXP_569471 
Protein GI58264630 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCAGCCCAC AGCCAGCGCC ATGACAGCGC CCACCGTCCC CGCAGACCAG CACGGCCACC 
CGCTCCCAGG CCCCGCAGAC CCCGCAGCCA ACGACACATG GCGCCCCTCC CGCTACCGCG
AACCCCTCCA CCCGGACAAC GAAGAGGTCC TCGAGCAGGC TGCCTACCAG GCCGCAGTCA
CTCGTTCCAG CGGCGACGAC AGGAAGAGGA AGATAAAGCC GAGGCGGACG GTCGACTACC
AGGGCGGCGT CCAGAAATGG AGAATGGTGC GTCGTTCGTC TGCCGCTTCG CTCTGCCTTC
TGACCGCCTC TGCAGCTGAA CAAGCTCAAG GGCGTCCACG AATTCAGGCC AGCCATACAC
CCTAACCCGT CTGATATTGT CAACGTGTGT ATCTGTCGGC TGTGTGCGTG GTAATGTCTG
ACAGCCATCC AGTTTCTTCC GCCTGTAGCA CTCCGGTCAA ACCCGTCGAC GTCTATATGT
GATTACTGGG TCCACACCTC GATAAATAAA GAACGTTCTC CCACCCGTGT CGTCAGAGTA
GGTGTCTCCT TCCGCACATG GACACATGGG CTTACATGCT CGGCAGTGGA CACCAGACGC
CCGTCGTCTG CTCACAGGCA ATGACAAGGG CCAATTCACG CTCTGGAACG GTGCCTCTTT
CAACTACGAG TCCATTACTC AGGTACACGA CGACTCTATC CGGTCCTTCA CCTACTCGCA
CAACGGCCAG GCGCTTGTTT CAGCCGACAA AGGCGGCACG ATCAAGTACT TTACACCGCA
TCTCACAAAT ATACATGGTT TCCAGGGGCA TCGAGAAGCT TGTCATGATG TTAGTTGGAG
TCCGAACGAT GAGCGTTTTG TGACTTGTGG AGATGATGGG CTTGTCAAGA TTTGGAGCTA
TAGAGAAGCC AAGGAAGAAA GAAGTCTGAG TGGTGCGTCG AGTTTTACCG GCGAGTGCTG
TAAGCTGACG CTGAGCAGGC CACGGTTGGG ATGTGAGATG CGTCGACTGG CACCCCACAA
AGGGTCTTAT CGTTTCCGGT TCCAAAGACA TGCTCGTAAA ATTTTGGGAC CCACGAACAG
GCAAAGATCT CTCTACACTG TGCGTCGTTT TGAAGTAGCC ATTTTACATA TAACCGCTAA
TCATCCACAG CCACTCTTCC AAATCCACCA TCAACACATG CCGATGGTCT CCCGATGGCC
ATCTCGTGGC GACAGCCGGC CAAGATTCCG TCATTCGCCT CTTTGACATT CGTACCTTTC
GCGAGCTGGA AGTCTTAAAG GGCCACGAAA AAGAAGTCAA CTGCATCGAA TGGCACCCGA
TCCATCACTC TCTCCTAGTT TCCGGCGACG CTCTCGGCAC TATCAACTAC TTTTCCCTCC
TCTCCCCCAC TCCCTCTACA CCCATCACCA CGCTTTCAGC CGCTCATGAG GACGCAGTCT
TCTCCCTCTC TTTCCATCCC CTTGGCCATA TTCTCTGTTC GGGATCAAAG GACTTTACAG
CGAGATTCTG GTGTCGTGCA AGACCGCCGG GGGGACAAGA ATTCGATAAA TGGCATCTTA
CCGAGGAAGG CGCTGCCCAA AAAGAACTGG AACGCATCAC AAAGCGTGAA TGGGGGACGA
ACGCCCCTCC TGCGAACGCT GCAGGCGGTG GCGGCGGCGG CGGCGGCGAT AAGCAGCAAG
TCGCTTTACC CGGTTTGTCC AACCTCGTTG CCGCTGTCAA CAGCGTCAAG ACCGGCCCGA
CGACGACAGG CGGAGGGCCA TCCGGTCTTC CAGGACTGGG TGCGCCCAAT GTCCATGCTG
GCACCCCGCC ATCGCGGGTA TCCACCCCTT CGTCCATGGG ACCTCCCGGT CCTGGTGCCC
AAGGACAAGC ACAAGGCGGT CAGTTCCCAC GAGGAAGGTC GGCGCTTCCT AGTCAGAACG
ATATGCTTCG GCATAATCAC GGCTCGCGTG GTGGGTTTGC AGATCGGGAT AGGAACGGGG
GAGGAGACAG AGGGGGAATG GATAGAGATA GAGATTCACG AGGGGGAAGA CAGGATCCAA
GAGGTAATCA GATGTATGGC CGTGGGCCAG GGGGACCTCC TCCCGGTCCT CCACCAGGTC
AAGGGGGATA CAATTACCCC CCTGCTCCTC CCAACTATCC CCCTTACCCG CCGTCATCCT
ACCCTCCTCC GCCCAACAAC CAACCCGGCT ATCCGCCCGC ACCCAATTAC GCTATGCCCC
CTGGACCCGG TGCTCCTCCT CAAAGTTATC CTTATAATCG ACCTCCTCAG GGACCCCCTC
AGAATAATAA TCCAGGTGGC CAAGGAAATT ACGGCGCTTC CGCTTCCGGC GGGTATGGCC
AGTACGGCGG TGGTGGTGGT GGTGGAGGAG GAGGAGGGTA CGGTCGGGAT GGACGGAGAT
AGAACAAAAC GACATAGAGA GAGAGAGAGA GAAATG
 
Protein sequence
MTAPTVPADQ HGHPLPGPAD PAANDTWRPS RYREPLHPDN EEVLEQAAYQ AAVTRSSGDD 
RKRKIKPRRT VDYQGGVQKW RMLNKLKGVH EFRPAIHPNP SDIVNFLPPV ALRSNPSTSI
CDYWVHTSIN KERSPTRVVR WTPDARRLLT GNDKGQFTLW NGASFNYESI TQVHDDSIRS
FTYSHNGQAL VSADKGGTIK YFTPHLTNIH GFQGHREACH DVSWSPNDER FVTCGDDGLV
KIWSYREAKE ERSLSGHGWD VRCVDWHPTK GLIVSGSKDM LVKFWDPRTG KDLSTLHSSK
STINTCRWSP DGHLVATAGQ DSVIRLFDIR TFRELEVLKG HEKEVNCIEW HPIHHSLLVS
GDALGTINYF SLLSPTPSTP ITTLSAAHED AVFSLSFHPL GHILCSGSKD FTARFWCRAR
PPGGQEFDKW HLTEEGAAQK ELERITKREW GTNAPPANAA GGGGGGGGDK QQVALPGLSN
LVAAVNSVKT GPTTTGGGPS GLPGLGAPNV HAGTPPSRVS TPSSMGPPGP GAQGQAQGGQ
FPRGRSALPS QNDMLRHNHG SRGGFADRDR NGGGDRGGMD RDRDSRGGRQ DPRGNQMYGR
GPGGPPPGPP PGQGGYNYPP APPNYPPYPP SSYPPPPNNQ PGYPPAPNYA MPPGPGAPPQ
SYPYNRPPQG PPQNNNPGGQ GNYGASASGG YGQYGGGGGG GGGGGYGRDG RR