Gene CNC01200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC01200 
Symbol 
ID3256450 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand- 
Start bp331074 
End bp331596 
Gene Length523 bp 
Protein Length138 aa 
Translation table 
GC content48% 
IMG OID638255338 
Productthioredoxin (trx), putative 
Protein accessionXP_569429 
Protein GI58264546 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0954839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGGCC AACTCTCCAG ACCCGTTAGG CTCTCCGTCG CTCCGCTCCG TACCATTCTT 
ACTCAGCGCG CCTTCCACGC TTCTCCTATA GCGCGGGACC ATATTCTTGA TGCCAGTAAC 
GAAGTCTTTG AGAAGCGAGC GCTTGATGCC GATAACTCTA AACCCGTCTT GGTAGACTTT 
TATGCCAGGT AGCGTTTGTG AGCTCTTGTT TAGTCTTCCG TCGGCTAAAA TTGTCCTTTA 
TAGCTGGTGC CAGCCTTGCC GTGTTCTCAC TCCTTTACTC AAACGGGTCA CCGGCCCAGA 
ATCCAATTAC GACTTGTTAA CTATCAATGT TGATGAGTAC CCTGAAGTTG CTGCCAAGTA 
CAAGGTGTCT GCCTTGCCCA CGGTGGTGGC ATTCAAAAAT GGTGCTGTCA AGAACAAGTT 
CGGTAAGTTG CACGATCTCT CATTTGCACA AGATTTGCTT ATGTGATTCA CAGTTGGATT 
TAGGGGACAA GATGACATTA ATAAGTTCTT GGGCATGCTT TAA
 
Protein sequence
MLGQLSRPVR LSVAPLRTIL TQRAFHASPI ARDHILDASN EVFEKRALDA DNSKPVLVDF 
YASWCQPCRV LTPLLKRVTG PESNYDLLTI NVDEYPEVAA KYKVSALPTV VAFKNGAVKN 
KFVGFRGQDD INKFLGML