| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC01180 |
|---|
| Symbol | |
|---|
| ID | 3256205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | + |
|---|
| Start bp | 328328 |
|---|
| End bp | 329456 |
|---|
| Gene Length | 1129 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638255336 |
|---|
| Product | Rossman fold oxidoreductase, putative |
|---|
| Protein accession | XP_569425 |
|---|
| Protein GI | 58264538 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCG CTGTCATTCA AGGAGCATCC GGTGGCCTCG GTCAGGCGCT GACCCGCTAC
ATTTTACGCC ACACCGGCCT TACTGTATAC GCACTCACTC ATCAAGCTTC ATCCCAAGGG
GTCAGAGAAT CCTTGTTGTC TGAAGTATGG GACAAGGGAA AGCATGATAG TGAGAGGCTT
ACTGTCGTTT CCAATGTGGA CGTGAGAGAA GAAGAGGGAC TAAGAAGAGG AGCAGAAATG
ATTAGGTCAA GGGAAGGAAG CGGGAGTGTT AGAGTTGTTG TCTGCCTCGC AGGTATTGTA
TGACTTTTCT TTTTACTAAG CTGTAGGACA TTGACACTTG TCATGCGGCT CAGCTGAAGG
CGGAAAAATC ACTATCTGCA ATCAATCTTC ATGACGCTCT TTCGTCCTTC CAAATCAACG
CTTTAGGGCA GCTAATTACT TACAAGCACA TCGTACCCCT GATACCGACC AAGAATGAGC
TATCGATTCT CAAAGCAAAA TGGAATTCTG AAGAGGAAGG ACATGATCCG GCGAAAGGCA
TGGTAAACGG CGATCATTCA ATATGTTGCT CGTTGAGCGC TCGAGTAGGA AGCATTAAGG
ATAATGAGAA AGGGGGATGG TACTCATACC GATCGTGAGT GGATTTGGAG AGCAGCAATG
ATATTAGCCT TATCTAGGTG CTGAATTGTG GTGGCATAGT TCTAAAGCAG CTGTGAACCA
GATCATTCGT ACTCTTGATC ATGAGGTACG TTGTCCGCCA AGTTCAGTGT AAATTGATGC
TGAGCATATC TTTTGCTCGT CATCAGTTAT ACAATAGATC ATCTTCCGCA ATTGCATATG
CCTATCATCC TGGCACGGTC TTGACCTCTT TCACATCTCC CATCATTGGC TCTCCTAAGC
CCCATCTTTC GCAGGGTCTG CTTACAGTTG ACCAAGCAAT CGACCGTCTG GTGAACATCA
TGAGTCAAGT TAAGAGGGGA GTACAAGGGA GCCAGAACGG AGTTGATTGG GGTGGAAGAT
GTTGGGATTG GAAAGGGGAT GTGGTCGAAT GGTAGACGGT TAATGGCATA TCGAGGGCAG
ATAATATAGT AACAAGGGAA AACTGTCTTC ATGCACACAT GTGGATAGA
|
|---|
| Protein sequence | MSVAVIQGAS GGLGQALTRY ILRHTGLTVY ALTHQASSQG VRESLLSEVW DKGKHDSERL
TVVSNVDVRE EEGLRRGAEM IRSREGSGSV RVVVCLAGIL KAEKSLSAIN LHDALSSFQI
NALGQLITYK HIVPLIPTKN ELSILKAKWN SEEEGHDPAK GMVNGDHSIC CSLSARVGSI
KDNEKGGWYS YRSSKAAVNQ IIRTLDHELY NRSSSAIAYA YHPGTVLTSF TSPIIGSPKP
HLSQGLLTVD QAIDRLVNIM SQVKRGVQGS QNGVDWGGRC WDWKGDVVEW
|
|---|
| |