Gene CNC00970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC00970 
Symbol 
ID3256254 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand- 
Start bp288224 
End bp289428 
Gene Length1205 bp 
Protein Length321 aa 
Translation table 
GC content49% 
IMG OID638255316 
Productconserved hypothetical protein 
Protein accessionXP_569414 
Protein GI58264516 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00651288 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATCC CCCTCCCAGA CACATCATCA GTCCCTTCTC ATGCTCTGGA CGCCCTTCAA 
GAAGACGCCC TTCTACCGAT ATGTAAAACG TGTGGAACGC AGTACCCTTC TCCTCGTGAT 
GATTGTTCGT TAATACTTCT ATTTATAAGC TCTCGTGTCC TCCTCTTGTC TACATTCAAA 
CATCTAACAG GCAGTTCCTC AGGTCCGATA TGTGAAGATC CGAGGCAATG GGTCCCGGCA 
AGCGGACAGG CGTGGACGTC GCTCGCCGAT CTGGGGTCAA AGTCCAAACA CTCCCTTTTG 
CCTGACAAGG AAGATGTCAG AATCTCCCAT ATTGTCACTG AGCCAGCATT TGCCATTGGC 
CAAACGCGTG AGCTTTTCCA TCTGTCATAC CAAAAGGCGA ATCATTGACG AGAAGCCAGC 
GTTTTTAATA GAAACGGCAG GAGGATCATA TATTTGGGAA TGCTCGGCAT TTCTTTCACT 
GGGACTCATC GGACATCTGT CGGAGCTTAA GAAACCTCTG AAGGCTATGG CAATTTCTCA 
TCCTCATGTA GATGGCACTT TTGTCAAGAG TATCCGCTCG AGCGCTGATT GTGGTCTATC 
AGTTCTTCTC CTCATCTTTG ACGTGGTCAC GTGCCCTCAA CATTCCACTC TACATCTGTG 
CCGCTGATAA GGAATGGTAT AGTCGAATCG GAGATCTCAA GGACAGCGAT GATGTGAGAC 
TCTGGTCAAG AGAAACGGAA CTTGGTCCAG GGGTCAAGCT CGTTCAGTGT GGCGGGTGAG 
CAGGTTGCTT CTTCACACTG ATGATAGTTG ACGAATGATG ATATTCAAGG CATTTTCCCG 
GATCATGCGT TTTTTATTGG GACCGCCTCT CCGAACCGCC TCCTTCTCCT TCTAATCTCC 
CTACTAAACC AACTCCTGTA TCCGGCATAA TCTTCACCTC TGATACGCTC ATGGTACAGC 
CTAATCAAAC TCACTTTACT TTTGCATGGT CTATACCCAA CATGATTCCC ATGCGTCCTA 
AAGCTGTCCT GAGAATTAAG GAGAGTTTGA AGGGGGTAGA GTACAGCCAG GCGACGAGTA 
GCTGGCCGGA AAGATGGATT CGGGAAGACG CCAAAAAAGC GTTGGAAGAG AGTGTTGTAA 
GATATCTCGG GGCCGAAGGG TGGAGATTTG AAGGAGATAG CCTGTTCGAG CTCGTCACCC 
AATAA
 
Protein sequence
MSIPLPDTSS VPSHALDALQ EDALLPICKT CGTQYPSPRD DCPICEDPRQ WVPASGQAWT 
SLADLGSKSK HSLLPDKEDV RISHIVTEPA FAIGQTPFLI ETAGGSYIWE CSAFLSLGLI 
GHLSELKKPL KAMAISHPHF FSSSLTWSRA LNIPLYICAA DKEWYSRIGD LKDSDDVRLW 
SRETELGPGV KLVQCGGHFP GSCVFYWDRL SEPPPSPSNL PTKPTPVSGI IFTSDTLMVQ 
PNQTHFTFAW SIPNMIPMRP KAVLRIKESL KGVEYSQATS SWPERWIRED AKKALEESVV 
RYLGAEGWRF EGDSLFELVT Q