Gene CNC00790 details

Gene Information

• Locus tag: CNC00790
• ID: 3256540
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: +
• Start bp: 222743
• End bp: 224767
• Gene Length: 2025 bp
• Protein Length: 584 aa
• GC content: 52%
• IMG OID: 638255296
• Product: RNA-binding protein, putative
• Protein accession: XP_569380
• Protein GI: 58264448

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.253852
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAAGC ACTCTGCACA CAAGGGCAAG GCCCCAGTCA CAGACAAGAA CAATAAGCGC 
AAGAGAGACG CACAGGATAG CAGCCAGGGG GACGCACCCG TCGCTCTCTT TGCTGCTGTC 
AAGGATACCG AGTTGGACGA CATTTTTGCA AAGAGCGTAA GTGTCTTGCC CTTTTTTTTT 
TCTGCAAAGC GATCGATGCT CATATACCGA CAATCCAGAA TGCCTTTTCT GCACCTGCAC 
CTGTTGCCAG TACATCAAAA GCTCATCTCC AGACTACATC TGCTCCCGCA GCCAAAAAGG 
GCAAGAAGAG CCCTTCACCC GAAATGGAAG AGGACGTGCG AGTAGACGAT CAGGATGAGA 
GCGAGAGTTC CGAGGAAGAC GAAGATGGAG AGGACAATGA GGCCGAGCTT TCCGAGATTG 
ATGAAGAGTT GCCGGACGAC GACGACGAGG ATGTTTCTGA TGCCGAGAGT GACAGTGAGG 
CGGCCAAGGC CAAGGAGACT AAAAAGACAA AGAAGAGCAA GCTCGGCAAG TATGTGCCTG 
CTGAGGAATC GGTACAGGAC AAGAACAGGA GGACTGCGTT CATTGGTAAC CTTCCTATCG 
ACGCTGCAAA GTCCAAGGTG AGCTCTATTC TTTGCTTCCC CCCTTTTCGT TTGGATACGC 
CAATCTGATA ATCGAAACGC AACAGTCGAC ATTGAAACAA CTCCGAGCCC ACATCATGTC 
ATTTGTCCCA TCTGCCAAGA TTGAATCTCT CCGATTCCGA TCTGTTGCCT TTGCCACCCC 
TACCGCTGCG CTCCCCACTG AGGATCCTGA GAAGGACGCC AACCAGCGTG CGAAACGAGA 
AAAGGAGCGT GCTGCCGCTT GGAAGGCCAA GCAAAACGCT GATGGGGAGG ATGCGGAGCT 
TGACAAGGCC AAGGTGTTTA TCGATGCCAA GGGAAAGAGA AAGGTCGCTT TCATCAAAAA 
AGACGTGCGT CCCTGATACT AGCTACCCAT CATCTCGCAT ACATAACATT GGCTGACAAG 
GTTATTCATA CAGTTCCACT CTGAGATTGA CTCTTGTAAC GCCTATGTCG TCTTTGCTTA 
TCCCCACCCT GACCGAGCTG CCAATGTCGC CCCGATCCTC GACCCCTTTG AGGCTGCCGC 
CAAGTTCATC GCGTCTGCGA ACAGCAGTAC CTTTTCCGGG CGTACGATCC GCGTCGACTC 
TGTCCGCTTA CCTTCTTCTG TCGGTCTCGC CGGCGCGTCC ACTTCCCTGA GCAAGCGGGA 
CGCATGGCTG CCTAGTAACA CGGATCCCAA GAAGAGTCTC TTTGTGGGCG GTTTAGACTA 
TGCGGCCAAG GAGGAGGATG TCAGGGTGTT CTTTGAAGAG TTGGTCAAGG CTGAGAGGGG 
TGCGAACAAG GAGGGGAGCG GAAAGTGGGT TACTGGTGTG AGGATTGTGA GAGATAAGGA 
GACTCAGCTC GGTAAAGGTT TCGGTTACGT TCACTTTGCT GTGAGTATAT TCCCGAGGAA 
AAGAAGAAAA AGGGTCTTAT GCTGATATTC AATAAAATAG GACCGAGAAA GCGTGGAAGA 
GATTCTCGCA ATGGACGCTA AACAAATCAA ATTCGCCAAA CGAACGCTTC GTGTGCAGCC 
ATGCAAGACC ATCCCTACCG CCAACACTCT TCAAAACACT ATCAAAAAGA TCGCTGCCGG 
CTCTGGCGGC GCTTCAAAGG ACAAGACCAA GAAAGCTTAT GTCCGACCGG GTGTCATCCC 
CAAGGGCGAC CCTGCGCTCG GTGACAAGCT CAAGAACCTG TCCAAGGAGG AACGAAAGAC 
TATCAAGAGC TCTGACGCTG ATCGGCAGGC GAGGAGGTTG GCGAAGAAGA AGGCCAAGAT 
GTCGTTGGAG AAGGACAAGG CGAAGGGTGC GGTCAAGTTG ACGTTGACAA AGAGCGAGAG 
GGAGAAGACG AGCGCGTCAA AGAAGCCCAA GGCGAAGAAG GGGAAGAAGA GGGCGCCGTC 
TGCGGTTGCA AAGATGAAGG GTTCAAGGGA GTAGACGTGT GTATT 

 

Protein sequence

MAKHSAHKGK APVTDKNNKR KRDAQDSSQG DAPVALFAAV KDTELDDIFA KSNAFSAPAP 
VASTSKAHLQ TTSAPAAKKG KKSPSPEMEE DVRVDDQDES ESSEEDEDGE DNEAELSEID 
EELPDDDDED VSDAESDSEA AKAKETKKTK KSKLGKYVPA EESVQDKNRR TAFIGNLPID 
AAKSKSTLKQ LRAHIMSFVP SAKIESLRFR SVAFATPTAA LPTEDPEKDA NQRAKREKER 
AAAWKAKQNA DGEDAELDKA KVFIDAKGKR KVAFIKKDFH SEIDSCNAYV VFAYPHPDRA 
ANVAPILDPF EAAAKFIASA NSSTFSGRTI RVDSVRLPSS VGLAGASTSL SKRDAWLPSN 
TDPKKSLFVG GLDYAAKEED VRVFFEELVK AERGANKEGS GKWVTGVRIV RDKETQLGKG 
FGYVHFADRE SVEEILAMDA KQIKFAKRTL RVQPCKTIPT ANTLQNTIKK IAAGSGGASK 
DKTKKAYVRP GVIPKGDPAL GDKLKNLSKE ERKTIKSSDA DRQARRLAKK KAKMSLEKDK 
AKGAVKLTLT KSEREKTSAS KKPKAKKGKK RAPSAVAKMK GSRE