Gene CNC00340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC00340 
Symbol 
ID3256605 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp100287 
End bp101874 
Gene Length1588 bp 
Protein Length331 aa 
Translation table 
GC content46% 
IMG OID638255253 
Productconserved hypothetical protein 
Protein accessionXP_569413 
Protein GI58264514 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACAAAGCCAA AGCGGTAATC TACAAGTCTC TTGGACCGTA TCAACGACCG ACAGACCCTG 
CAAGTCAAAA GAACAGAGGA AAAACGCCGG ACTCTGAACA ATAAGAAGTT TCTAAACACT
CTTGCAAAGG ACTGACGAAG ATCCAGCTTC GCCGTCCGGA AGACGAGTCA CGGTTTCCCA
AACACTTCAA ACTTCCATTG TCATTCAAAA CCTTTCATCT ATGTAGGTAA ATTTGGCGCA
TCAAAATTAG AGATCGTATA ATAGCGAGAT CCAGCAAGTT TGAAGAACGT AGCGCAAGGC
ATCAGGGCAC ATTACTGCAT TCGTTGCTAT AGGTGAAATT CGAATATGTG TGTCACTTTT
TTCACCCTCT CTCAGCCGGG CTACAAGCTG TTAGTCAATA AACTTATCCC TATTGTCAAA
ACGTAGAGCA GAGGGCTGAC GTATGTGATC AAGCATCTTA GCATTTAACC GGGACGAGTT
TCTCGACCGG CCGACTCTCC CAGCTCACTG GCATGACTTT AATTCTCCCT CTCCTTTGAC
TCCGACCCTT TACAAATTTA ATAACTTTAC AGACCCATGC TCAAGGGAGA ACAAAGAAAG
TGACGACGGC GGCAGAGTTT TGTCGGGGCT AGATAGAGGC AAAGCGGAGG GAGGAACTTG
GTTAGGGATA AGCAAGGATT TGAAAGTAGC TTTACTGTGA GTACCATCAT CCTTCAAAAG
TATATCTTCT CCAAAGCTGA CTAAAATGGA TTTCAGGACT AATATTGCAC GTATCCGACC
TGCCCCTGGT GTTCAACCTC TCTCTCCACC ACCTTCACGA GGCAAACTCC TCCGCGAGTT
CCTATCCCCT TCACCTCTCA CTTCCTCCCA ATTAGAAACC CAGTCATATA TCTCCTCCCA
CTTCCCTACT GCCGGGGACT ATGAAGGATT CAATCTCTTG CTTTTTTCAC TCTCACCAGA
GCGTAATATT GGCTATTTGA CAAACCGTCC ATCACCTTCT TCCCTCGACC TTACTAGCTC
GCTTTGCGGA GGTGAAGACG GTCAGAGGAG GTGCGTGGGG CTCTCAAATT CACCGCTTGA
CGAGAAATGG CCCAAGGTGC AGCAGGGTGA GAAGAATATG GAGAAAAGCT TGAGAGAATG
GGAAGAAAAA AGAGAAGGAG AGGACCGGCT GGTTGAGCGA ATGTTTCGAG TTCTCTCGTG
AGTTGTTCCT GCATAGTTTG ACCACTTGTA ACGGATTAAT GCTGACAGCT GGTTATCGAA
CACAGACCCA GTCGGCCGAT TACATGTGAC GATGATCTCA CCTTGTCAAC AACAATACCG
CCCATCAAAC TAGGTGAAGA TCTCTTTCTC AATACGGATC CACAAAATAC CAGAGCTCGA
TGGAAAGGTA CTCGTACGGC AACTGTCATA ATTGTCAAGG ACAGCGGGGA AACAACATAT
GTAGAGCGAG ACATCTGGAT GATAGACGAA GACGGTGAAC CTAAAAAGGG AGAGGATGAA
AGGAGGTTTA AATTCGTGGG CGAGGAGAAG TGAAGATCTC GAGTCTCATC CTTTCTGATA
TCAAGTCGAA TCGCGGTATA ATCACATT
 
Protein sequence
MCVTFFTLSQ PGYKLILAFN RDEFLDRPTL PAHWHDFNSP SPLTPTLYKF NNFTDPCSRE 
NKESDDGGRV LSGLDRGKAE GGTWLGISKD LKVALLTNIA RIRPAPGVQP LSPPPSRGKL
LREFLSPSPL TSSQLETQSY ISSHFPTAGD YEGFNLLLFS LSPERNIGYL TNRPSPSSLD
LTSSLCGGED GQRRCVGLSN SPLDEKWPKV QQGEKNMEKS LREWEEKREG EDRLVERMFR
VLSPSRPITC DDDLTLSTTI PPIKLGEDLF LNTDPQNTRA RWKGTRTATV IIVKDSGETT
YVERDIWMID EDGEPKKGED ERRFKFVGEE K