| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB05560 |
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| Symbol | |
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| ID | 3256007 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006684 |
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| Strand | - |
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| Start bp | 1560435 |
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| End bp | 1565095 |
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| Gene Length | 4661 bp |
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| Protein Length | 1317 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638255198 |
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| Product | conserved hypothetical protein |
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| Protein accession | XP_569299 |
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| Protein GI | 58264286 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00756] pentatricopeptide repeat domain (PPR motif) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.104177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AATCATTCCC CCACAAAAAG TAGCCGCACT TGGCTACCAT CCTAATTCCG CCATCCATGC
TTCCTTCTCG AGCTACTCGT ATTTTTCCTA GGACCGCCAC CTCCTCGACC TCTGTCGCTC
ACGTCTTGAC GCTTGTCCAC AATGAGTATC TCCAACAGCT TGGAGCAACG ACTGCTGTTC
GCAGGATTAG TGGCGCACCT TCAAGAGTAT TTTCAAAAGT GAGCGGCGAT GCTTTCGTTT
GTATGCGACT GGATGCTGAC GCTATGTAGG TGTCACAAAC TCTGGTGGCC AAATCTCAAC
CAGTACATTT ATGCGCAACG TGCGCCCCTC AGCGCTGGCC GGTCGCAGCC AGAGAAGGAA
GTTTGACTCA ATTAGAAAAT AGAGGATTAT CCCAGGTGAG TTGTATTTTG TTGCAGAGAA
GAACTTCAAT ACTGATGACG AGTTAGATGA TACGGTCTTC GGCACACACC CAGTCAATAC
GGTCGTATTC GAGTAGCGCT GTCCAACATG TCGACGACAC CCATCTTTAT AACTCCTTCT
CTACCCCAAT TTCATCTAAA GAGGCCCATA CAGGTGATCA ACGAGAACGT CAGAGATACA
AACACTCTCA AGTTCTATCG GTGCACAACC AGTTCATCAA CCCAGTCTTC CCTCCATCTC
CCGAATTTTG TATTCCTGCC AAGCTATATC AGAAGCTTCT CCATAAAGAA TTCAAGTCTG
CCTCCGATTT CATACAAGAA TTCAACATGT TGGTGCCGGA GCCTTTGGCG TTCAAGAAGC
TTGGCTCAAT ATCCAACCTT GCCTGGATTT TTGAGTTATT CCGTCAAACG GCCAATGCAA
ATGAATGGGT ATGGCTGGCA AGTGGCTTAG AGCAGTTGTT GGATTTGGAT ACCATTGGTG
ATAGCAACCA GAAGGCGATG CCCATGGTGG CTGCGGCTGT TAGGGCTTTT GCGGTATCGC
GGCTTGGAGG GTCCAGTGCC GAGGTCGAGG AGATCTTGCA AAAAGGAAGG AGCCTAACTT
TCACTTTGAT CACTCATTCT CTAGGTCACG CTATCGCGTC ACTGGCCTAT GTACAAGTTG
AGGAATGGGA TAAGGCAAGG AAAGAAATGG TCACTGGTCT GGCGAGGATT ATCACTCGAA
TCACCACTCA CAATGGTCAA GTAGACGCTT ATCCCAAATA CGACTATTGC TACCTCAAAC
TGTACGAAGG AGCTGTTCTC GCCGCCGACC GCAATCACGA TCTTGTCGAC TTTCTTCGTA
TCTGCCCCAC CAGTTTCCGC CACCAGCTCA TCCAGAGCAC CAAGCCAATG CATCGGTTCT
ACGATAATGT AGCGAGGATC TTTTTCAGGG CGCTTACTCG AGTGAATAAC CCGATCCAGT
GGTGGAGCGA AGAGTATAGT CAACATCCGA CGGCAAGGAC GAGGTGGTTA GGGACTTTGA
TGTTTGTCGG TCTTTCACAA GATCGAAGCC GACTACAAGA TGCGTTGGAT CTTCATCAGG
TCCTTGCGGA CAGAGGGATC ACAGTTCCAG CTGATGCTGC CATCTTTTTA TGCGAACAGC
TGGCTGTCAC CAGACACGAG AATGCCAAGG AAACTCTTCA ACGCATGAAG ACTCTTCACA
GCCCCCTTAG CCGCTCAGCT CAACGACGAA TATTGTCTTT CGCGGGCCGG GTGGGCTGGA
TGGAAGAAGA AGCGGCTGCT TGGCATGTCC TTTCGACAGA GTGGGAGGCG TCGTGGCATG
ATCGTGTCGA ACTGGCCAAG ATTTATGCAG AAAGAGGTAA AGTGGAGGAG ACCATTGGTG
TTCTTAAAGA ACGCGTGGGC GAACACTGGA CCAACAACCC TCTTGCGCTC GAAATCCTCT
TTATGACTCA TATCGCTGCC AACGAAGCTG AGGAAGCCAA GTCGGTGCTC GATCGTATGA
CCGCATTGCG CGGGCCGTCA ATGTACGCTT ACAACGCCTT GCTGAAACTC TATGCCGGCC
AGGTCAATGT CAATTCTGCC GTCAGCACAT TTGATCACCT TGTTGAATCT GGCCTAGTGC
CTGACTTGTA CACTTATACG ACTCTCATTA CCCTTTTTGC CAAACGTCGA GATCCAGTGA
ATGCGGAAAA TGTTTATCGC GCCATGATCG AAGCTGGTGT CAAGCCTGAT CCCATCGCTC
ATGCCGCCAT GATTAACGCA GAAGTTCAAG CTGGAAACTG GGGACAAGCC GCCAAGCGCT
GGGCATCCCT TGATCCACAG ATGAGAATGA CAGATCCCGT ATTATCGACA ATTATCCAAG
CTCTTGTTTG GTTACCTGCA CCTACGGAAA GCGTGATCAA ATTGTTCAGG CAGATCAAGA
AGCCAACGAG CAATGGCTGG GCGTTGGTCC TCATGTCTGC ATGTGACAGC GGGGATATGG
ATCTCGCTAG GGATCTTTAC GAAGAGATGG ACAGTCTCTC TCGACAATAT CACGGCCCTT
CTCCTAACGT TTACCATTTC TCAATTCTTT TGCATGGGTA TATCCGGATC GACGACGCTG
CAAGCTCGAA AGCGGTGTAC AACGAGATGA TCAAGCGAGG TATCTTGCCT TCGAGTGTCA
CGTATGGTAT GATTATTCAA TCATTCACCG ATGCAAGGGG TGAGCGAGCA TTGGAGCAAG
CGCACGCTTT CGCCATGTCT GTACACACCG AAGTCGCCAA AGGACAAATT GCGGATATTG
GTGCGGACAG AGCGCTCATC AACCAGAACA TTTTCTCGCC CTTGGTCCGT GCGCATGGAG
AGCTACAGAG ATGGGAAGAG GCGCAGAATT ACTTTGATTT GGCCGATTCT GATGGGCAAA
GCGGCCCGAG ACAGAGGGTG CAGATGTGGA CGCAGTTGAT GGATGTTCAT CGTCGAGCAG
GAGATGTCGA TAAAGTGCTG GAAGTTTGGG AGAAGATATA CAACTATGCG GTGGAAAATG
TGAACTTCAA GCCGTCATGG GTGACCAGAG GTCGCGGCCA AGACTTGCCT GTACGCACCA
ACGATTCGAT CCTGTGCATC CCCCTCTCTA TTGCTCTTGA CAGTCTATCC TCAGCTGGGC
GGTACAAGGA AGTGAGGAAG TTGTGGAATG CTGTCGACAC GGCCGGTTTC GGCTTTGACG
CGGAGAATTA TAATCATCTT ACTGTTGCCT TGATCAGGGT CGGAGATGTG GAAGGCGGGT
TCAGGGTGGC GGAGATGGTG CTTATGAGGC GGTATGCGAG ATATCGTTTC AGACGTAGAG
AGGCAATGAG GGAAAAGAGA GAACCAATGG AAGAGATGGA TAAGAGCAGA GAAGAGGATG
AGGAGTGGGA TTTGGTGGTG GATGAATTTG AGGGCAAGAA GGATGAGTAT GCTGAGGAAG
AAGGACAGGA CGAGTTGGAA AAAGAGCTGT TAAGTCTGCA GGTCCAACCT GTGTTTGGTC
CCCCCAATAG GCGACACAAA TACAACCTCT CGTCTCCCTT CCCTCCTCCC ATGGAATCCT
CCAATCTTCC TTCTGCTGAA CGTTCAGTGG TGGAAAAAGC CGAAACCACT TCTCAAGCGG
AAACCCTCTT GAACCGCTGG AGACCAAGTG ACGCGCTTTG GAAACCATCC ATCATCACAA
TTTCTGTCAT CGACCACGCG TTGCAGCAGT TGGAAGAGAT GAAAACAAGA CGAGTTTGGA
TTCCCCTCTC TCGGGAAGAG CAAGCAGAAG CAGAAGCCAA AATTGCGTCG GAAGAAGATC
CTTCCCGACC CGTGTACACT TATCGTACGC TCTGCCCATG CCCTACCGAC AAACCCCTGC
ACCAAAGCGA GCAAAACGAC TTTTCATCTT CTTCTTTGTC TTCATCCGAG TTTGGCCTTG
ATTCTGAGTC TGAGTTCAAT TTCACCTCTT CAAAGAACCA AGACCCGAAC CAACCAGTGC
AAAAAGGTGT TTATGGCATT GTTCTGCCCA TCTTTGGGAA CATTCCAGTC CGCCATTTCC
GAACGCAACG TATCCTTGAG ATGACCCCCG GCTCATTTGC GCTCTCGTTG AGGAGGAAAT
ACAGCCGGTT GGCGGATTTG ATCATGTTTC ATAGGAAGAA GAGAGCTGGT GCGAGAATGA
ATGATACGAA GGGGGAGGTG TACAAGGATT AGACAGTGAG ATTCAAGAAG GGTTAGGAAA
AGATGGGATG AGATCTTGGT GTTTGGGTTT TATGATTTCT TATTAATGTA GGTAAGTTTC
TCCGACCATT GCGGATCATT TACATCGGTG CTGATATGAT TCTCACAGTA GGCGGAAAGA
GAAGTTTCTG TAAGAACTTA ATTGTTGTAT GATCAGTTCA GAAAAGTCGC TCCATTAGTC
AGTCAATCAA ATGGAAGGAA TGCAGGACGC AAAACGTGAA AGAGATGGAA CGGACCAACA
ATAACGGCAT GGGGGAAGGG TTACTGCATA CTCATTCCTT TCTGAACCAA GTAAGTTCCA
GTTCCAAGAT TCCATCGTCC TACATTTGTT TACTGATCCC TTGACCAGGA AGAATAACTA
TAGAAATGAG GATGTTTACC ACTACGTTGA TCGTTGTTCG AATAGTGGTT GGTGATAGTG
GTGGTAGAGG CATTCAAATT TATACCCAGC ATTCCATGTT ATCGCATTAT CTATCGCATT
AGTCACCCAT TCATCCTAGA TATTCTCACG TCTCGTATTT T
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| Protein sequence | MLPSRATRIF PRTATSSTSV AHVLTLVHNE YLQQLGATTA VRRISGAPSR VFSKVSQTLV
AKSQPVHLCA TCAPQRWPVA AREGSLTQLE NRGLSQMIRS SAHTQSIRSY SSSAVQHVDD
THLYNSFSTP ISSKEAHTGD QRERQRYKHS QVLSVHNQFI NPVFPPSPEF CIPAKLYQKL
LHKEFKSASD FIQEFNMLVP EPLAFKKLGS ISNLAWIFEL FRQTANANEW VWLASGLEQL
LDLDTIGDSN QKAMPMVAAA VRAFAVSRLG GSSAEVEEIL QKGRSLTFTL ITHSLGHAIA
SLAYVQVEEW DKARKEMVTG LARIITRITT HNGQVDAYPK YDYCYLKLYE GAVLAADRNH
DLVDFLRICP TSFRHQLIQS TKPMHRFYDN VARIFFRALT RVNNPIQWWS EEYSQHPTAR
TRWLGTLMFV GLSQDRSRLQ DALDLHQVLA DRGITVPADA AIFLCEQLAV TRHENAKETL
QRMKTLHSPL SRSAQRRILS FAGRVGWMEE EAAAWHVLST EWEASWHDRV ELAKIYAERG
KVEETIGVLK ERVGEHWTNN PLALEILFMT HIAANEAEEA KSVLDRMTAL RGPSMYAYNA
LLKLYAGQVN VNSAVSTFDH LVESGLVPDL YTYTTLITLF AKRRDPVNAE NVYRAMIEAG
VKPDPIAHAA MINAEVQAGN WGQAAKRWAS LDPQMRMTDP VLSTIIQALV WLPAPTESVI
KLFRQIKKPT SNGWALVLMS ACDSGDMDLA RDLYEEMDSL SRQYHGPSPN VYHFSILLHG
YIRIDDAASS KAVYNEMIKR GILPSSVTYG MIIQSFTDAR GERALEQAHA FAMSVHTEVA
KGQIADIGAD RALINQNIFS PLVRAHGELQ RWEEAQNYFD LADSDGQSGP RQRVQMWTQL
MDVHRRAGDV DKVLEVWEKI YNYAVENVNF KPSWVTRGRG QDLPVRTNDS ILCIPLSIAL
DSLSSAGRYK EVRKLWNAVD TAGFGFDAEN YNHLTVALIR VGDVEGGFRV AEMVLMRRYA
RYRFRRREAM REKREPMEEM DKSREEDEEW DLVVDEFEGK KDEYAEEEGQ DELEKELLSL
QVQPVFGPPN RRHKYNLSSP FPPPMESSNL PSAERSVVEK AETTSQAETL LNRWRPSDAL
WKPSIITISV IDHALQQLEE MKTRRVWIPL SREEQAEAEA KIASEEDPSR PVYTYRTLCP
CPTDKPLHQS EQNDFSSSSL SSSEFGLDSE SEFNFTSSKN QDPNQPVQKG VYGIVLPIFG
NIPVRHFRTQ RILEMTPGSF ALSLRRKYSR LADLIMFHRK KRAGARMNDT KGEVYKD
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