| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB05350 |
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| Symbol | |
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| ID | 3255577 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006684 |
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| Strand | + |
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| Start bp | 1510770 |
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| End bp | 1515946 |
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| Gene Length | 5177 bp |
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| Protein Length | 1325 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638255177 |
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| Product | ATP-dependent RNA helicase A, putative |
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| Protein accession | XP_569279 |
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| Protein GI | 58264246 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0937358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTGGG AGAAACCTGT GGTGGAGAGT GTAAGTGTGA GAAAGCTTTT CGAAAAAGCT
CTGATCGATT GTGGTCGTTT CTCAAACGTA AATCTTAGAG ACTGATTAGC TGATATGCAT
TATCTGCTTG TTGCCGCAAA TATCTGCAGT TTCAAAATAG AGGATCGGAT CCGCAAACAT
ACACCGGCTC GGTGACGCTC AGGAAGCGGA CCAGCAAGAA TATCTACAAC CTCGACGAAG
TGCGATTGAT TCCTCATCAA CCGTTGAGGA TTGAGTCTGC CGCTGAGGCC AAGCATTATG
CCGCAACTTA TGCATTATTC AGAGTAGGTC TAACATCATG GTAACTGCTT GCTTGTATAT
AGCATGGATA ACTCATGCAA TATGCATCTT AGTTCTGCTC GCATCTCCCA ATGTCTATGA
CTCTCCCTCC ATCTATACGG CCGTACTGGT CAGAACTGAC TGCCGAAAAA GCTGCCGCCT
CAGCTCACAG GGCTTGGGAG TACAATCCAG ATCCTTTTGC TGCGAAGAAA GAGGTATCAG
ATCGACAAGA GAAGCGAAAA CAAAAGGAGG AGAAAGACAA AGAAGTTGGT CCCTCGGGAG
AAAGTGCGAA GGCAAAGGAG GCAAGGGGAA GCGGAGGACG TGGGTGGGAT AATGCACCAG
AGGTGAAAAT GGCAGCTTCA TTGAGGGAAA TGGTCGAAGG AACGGTGAGA AAGGTAAGCA
ACAAGATATA TCTTCACAGG GCGTGGAGCT GAATGTTTAT TTGCAGATGA TGCAGCAATT
CCCATCTGCT GTACTGGAAG CCAGCAGAGA TGCTGCATCA ACCGTATCAA CCGCTCCATC
TGGCATCTCA ACTCCTGCTC TTGACCTATC TACCCTCCAA ACACAGCTCA CTACCCTCGC
GTTCCGGCCT TCGCACATCG CTTCCTGTTT GTCCGCTGTT TCCTCCGCGA CTGCAAGACT
CAAATCCTCT TCTTCTTCTT CGACTAACGA CCCTCTCGTA CTCTCCCTAA GTATTTTATC
CCCTCTGGAA GCTGCTATCG AATGGTTACT GCTACATGTA CCAGAAGACG ATTTACCTGG
AAGATATCGA CCTTCTTCAA GTTCGGCGGA TTTTATTACT GGAGCCAGCG CAAAGGCCGG
CGGGAAAGAT GCGCTCGTCA AGGGATGGTT AACTGACAAG TTGGTGAAGC AAGCCGGATT
TCCAAGGAAA GCGGTGGAAA AAGTGTTGGA AACCGAGGAA CGTGAATCTG TAGCGCTGGA
TATTCTGGGT AGACGGTTAT GCGGCTGGGA ATCAGGAGAA GATGGATGGG GTGCAGAAGA
ATATGGAGAT GGGTGGACGG GAGATGGAAA GGAGAGGGAA GAGAGGCAGC AACACAGGGA
AGAAGAGATC TTGGCTCTCC AAGCTGTTTT GGGTGAAAGG TATGAAGAAA CGTCGGCTAT
CTCTTTTACC ATCCACATCG GGCAAGAGAC CACAGGCGGG AATGATACCC TTGCGTTACA
CATCATCTTC GATGAAGCCT CCCCTTACCC CTCCGCCTCC TACCCTACCT GCGCACCAGC
ATTCTACCTT ACTTCCGACA CTCTTCCAGC ATACATCCGC CTCCACCTTC ACTCCCAGCT
TTTAAGACAA TTCCGCGATC CGGAGAGGCA TGATCTCCGT TCTGTCCTCG AAAGTGGATG
GGGAGGAGCA GTGTTGAGTA TGGTAGAATA TCTCGAGACC ACCTTAACCA AAGTGGTGGA
GAACCCTCCG GATGTAGGAG AGGTTACAAA GTATCTTGTA CCGAAAGTGG AGGAGGTCAT
ACCGCGGGCA GAGAAGGATA TGCAACAGAA GAAGAGACAA AGGTCTCAGA AAGAAATGGG
TGAGAAAAGA GCCCCAACGA AGGAGGATGA AGAGAGAGTG AAGAGGAAGA GGCAAGAGAT
GTTGGATCAT CCCGAATATG AGAAGATGAT GAGTGACAGG ATGAGTTTAC CTGCGTGGAA
GGAAAAGGAT AATATCACAG GGGCTCTGAA GGATAATAGA GTTTTGGTTG TCGTTGGTGA
AGTGAGTTAT TTAACCTAAT CGAAAGAAGT GTGCTGATAA TCTACAAGAC TGGTTGTGGT
AAAAGGTAAT TTGAGAATGA CCGTGTGTAG TATCATCTTT CATCAACTGA TAAGCAATTC
GCAGTACTCA ACTCCCTCAA TTCATCCTTG ACGACGAAAT ATCTGCTGGC CGTGGCGCTT
CCGCCAATAT CATCGTCACC CAACCTCGTC GTGTAGCCGC GATGGGTGTT GCCTCCCGTG
TCGCCCAAGA ACGTATGGAA GACCTTGATA AATCCCCTGT GGCGGGTACA GTGGGTTACG
CAATCCGTGG CGAACGGCGA GCAGGGCCAG ATACGAGTCT CTTGTTCTGC ACAACTGGTG
TCGTACTCAG ACGGTTGGGC AGTGGGGACC CTGATTTGAA AGGGGTCAGT CATGTGGTTG
TGGATGAAGC GCATGAAAGA GGAGTGGATA CGGATTTGTT GATTTGTTTA TTGAGGGATT
TGCTGGAGAG GAATAAGACG ATCAAGGTTA TTTTGATGTC TGCTACTATC AATGGTGAGT
CTAAGGGCGT CGGCGGCTAG GTAATGAACG CTCGCAAGGT GGCTAACAAT GTGACGTACT
TTAGAACAAA TCTTTATTGG TCAGTAATTT GACATCCGTC CAAAGAAGCA TACTAATTTG
TCGATAGACT ATTTCGGTGG ATGTCCCAGC TTGAAGATCC CAGGTTTCAC CCATCCAGTG
AAGGACTAGT AAGTAACAAT CCCTTCCATC TCAATGGCCT AACTTACACG GCTGTTATTA
GCTACCTCGA AGACATCATA TCCGACTTAC ACTACTCTCC TACACCTTCT CGTTTTGGGC
CCCGCCCATC TGAAGAACAA AAAGCGTCAA TTCGCGCCCA ATTTGCCAAA CTCAGTCTTT
CCCCCGATTC TCAGCGCGCC TTGGAGATTC TCTCTGCCTC AGATCGTATT GACTATTCGC
TTGTGGCTGC TGTCGTTAAG CACATCATCA ACAACGCCAC CTCTCCCGAC GGTGCCATCT
TGATCTTCAT GCCAGGTGTG ATGGAAATTC GTCAGTGCAT CAGTGAACTC CAAACAACCT
CCCTGGGATC AGTAGAAATT ATGCCCCTCC ATGCAAATCT CTCAAGTGCT GAACAACGAA
GGGTCTTCCT CCCTACTAAA CCCAAGCGAA AAATTGTCGT GGCCACAAAC GTTGCGGAGA
CGTCTGTTAC CATCCCCGAC GTGATTTACG TGGTTGATGG AGGGAAAGTT AAAGAGACGC
AGTATGAAGC TGGGAATGGG ATGCAAAAGC TGGTTGAATG CTGGACCAGT CGAGCGTCGG
GTAGGCAGAG AAGAGGTCGT GCAGGTCGAA CACAACCGGG AGAGGTAAGT TAAATGTCTT
CCCATCAAGA CTTTGAACGT GGCAGCTGAC AAACATTGGA GTGTTACAAG CTTTATACCC
GACAAACTGA AAATAACAGC ATGCCCCGAT TCCCCGTTCC CGAAATTCTT AGAACACCTT
TAGAGGCATT ATTCTTACAA GTCAAGGCTA TGAATGAGGA TACGGATGTG AAGGCGTTTT
TGAGGTACGT CTCAATTGTC ATTCACAGCG ATTAGCTTCT CATGCTACGG GATCACAATA
GCAAGGCGAT CGATCCGCCG AAGTTGGATG CCATCAATGC TGCATGGCAG ACACTTCAGG
ATCTTGGTGC GGTTGAAGGA GAAGATCACA AGAGTCGTCT TACCGCTCTC GGTAGACATG
TGAGTTAAAG CATCATCATC CTGTCGCGTG TTTGGGTGGC TGACGTCGTG CATTTGTAGA
TGAGCGCCAT TCCTGTAGAC TTGCGTCTTG CAAAGATGCT TATTCTTGGT ACTATCTTCA
AGTGCCTGGA CCCGAGTGAG TCAACTTCTA CTTAGCCCAT TTAGAAATAC CTGGGGCTGA
TCCAGCTGGT CCCAGTTCTC ACAATTGCGG CCTTGCTGTC ATCAAAACCT CTTTTCACCT
CCCCTATCGA CAAGCGTGAC GAAGCAAAGA AAGCCCGAGA GTCTTTTGCT TGGGCAAGAT
CTGATCTGCT CACCGATGTG AGAGCGTACG ATGCCTGTAT AGACGTGAGG AAGAAGGGCG
GTAGTCACGG TGCGGTCAGG CAATTCTGCG AACAAAATTT TATCTCTCCC ACCACACTTC
GAGATATTAC CTCCCTTCGA TCCGACTTCC TTTCCGCCCT TTCTTCTCTC GGGTTCATGT
CCTCTTCGTC AAGCGCGGCA GAGCTCGCCA AATATAATGT GAACGCCAAG GTGGACAACC
TCGTGAAAGG AGTTGTCGTC GGCGGTCTTT ATCCGCGAGT TGTCAAGATT GCCATGCCGA
AAGCTCAGTT TGAGAGAGTG CAGCAGGGAA CAGTGCAAAA GGATGTAAGT AGAGTCACCA
GCCAAACAAT CACGTCCTTT CTAATTAGGA TGCTGATCCA CGATTGTGAT GCTGATCCAC
GATTGTTCAT GAATAGCACG AAGCAAAAGA GGTCAAACTC TACGATCAAT CTGGTCGTGT
ATTCATTCAT CCCAGCTCTA TCTTATTTAC AGAATCCGGT TTCAAATCCG GATATCTGAC
TTACTTCTCG AAGAATGAGA CAAGCAAAGT TTTTTTGAGA GATGCCACAG AGGTAAGCCA
CCTTTGTTTT CATTACCTTG CTGGCTCTAG GAGAGTCGAA TGAGTAATGC TAATGAACGT
AAACTGAAGG TGCCGCTTTA CGGGCTTTTG CTCTTCGGAG GAAATATCAC AATCAACCAT
TGGGCTGGAG GTATTATGCT TGGTACAGAC GGCCATGTCA AGATACGAGC AAACACGCGT
ATAGGTGTTT TGTGTTCTCA ATTGAGGTAT GTCATTCACT TCACCTTGTT CACTGTGTCT
AAACATCTGT TGGAGATACT GACGTGCACT GTTCAACAGA CGGCTTCTTG ACGCGCAGTT
ATCTGAGCAA ATCGAGTCGC CCCATGCCGC AGATTTGACT GGTCACGAGG AGGTAGTGCA
GGCAATGTTG GCATTGCTGC AGCGGGACGG ATTGTCCATA TAGTAGACTT CAAGTAGCAT
TTTTTACATA ATCTTGCATC AATCTTGCAT TCACTGTACA AGTGACCGAC AAATTTTGAG
AACGGGTCAA GGGTTTA
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| Protein sequence | MGWEKPVVES VSVRKLFEKA LIDCGRFSNF QNRGSDPQTY TGSVTLRKRT SKNIYNLDEV
RLIPHQPLRI ESAAEAKHYA ATYALFRLPP QLTGLGSTIQ ILLLRRKRYQ IDKRSENKRR
RKTKKLVPRE KVRRQRRQGE AEDMMQQFPS AVLEASRDAA STVSTAPSGI STPALDLSTL
QTQLTTLAFR PSHIASCLSA VSSATARLKS SSSSSTNDPL VLSLSILSPL EAAIEWLLLH
VPEDDLPGRY RPSSSSADFI TGASAKAGGK DALVKGWLTD KLVKQAGFPR KAVEKVLETE
ERESVALDIL GRRLCGWESG EDGWGAEEYG DGWTGDGKER EERQQHREEE ILALQAVLGE
RYEETSAISF TIHIGQETTG GNDTLALHII FDEASPYPSA SYPTCAPAFY LTSDTLPAYI
RLHLHSQLLR QFRDPERHDL RSVLESGWGG AVLSMVEYLE TTLTKVVENP PDVGEVTKYL
VPKVEEVIPR AEKDMQQKKR QRSQKEMGEK RAPTKEDEER VKRKRQEMLD HPEYEKMMSD
RMSLPAWKEK DNITGALKDN RVLVVVGETG CGKSTQLPQF ILDDEISAGR GASANIIVTQ
PRRVAAMGVA SRVAQERMED LDKSPVAGTV GYAIRGERRA GPDTSLLFCT TGVVLRRLGS
GDPDLKGVSH VVVDEAHERG VDTDLLICLL RDLLERNKTI KVILMSATIN DYFGGCPSLK
IPGFTHPVKD YYLEDIISDL HYSPTPSRFG PRPSEEQKAS IRAQFAKLSL SPDSQRALEI
LSASDRIDYS LVAAVVKHII NNATSPDGAI LIFMPGVMEI RQCISELQTT SLGSVEIMPL
HANLSSAEQR RVFLPTKPKR KIVVATNVAE TSVTIPDVIY VVDGGKVKET QYEAGNGMQK
LVECWTSRAS GRQRRGRAGR TQPGECYKLY TRQTENNSMP RFPVPEILRT PLEALFLQVK
AMNEDTDVKA FLSKAIDPPK LDAINAAWQT LQDLGAVEGE DHKSRLTALG RHMSAIPVDL
RLAKMLILGT IFKCLDPILT IAALLSSKPL FTSPIDKRDE AKKARESFAW ARSDLLTDVR
AYDACIDVRK KGGSHGAVRQ FCEQNFISPT TLRDITSLRS DFLSALSSLG FMSSSSSAAE
LAKYNVNAKV DNLVKGVVVG GLYPRVVKIA MPKAQFERVQ QGTVQKDHEA KEVKLYDQSG
RVFIHPSSIL FTESGFKSGY LTYFSKNETS KVFLRDATEV PLYGLLLFGG NITINHWAGG
IMLGTDGHVK IRANTRIGVL CSQLRRLLDA QLSEQIESPH AADLTGHEEV VQAMLALLQR
DGLSI
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