| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB05060 |
|---|
| Symbol | |
|---|
| ID | 3255911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | - |
|---|
| Start bp | 1443349 |
|---|
| End bp | 1445860 |
|---|
| Gene Length | 2512 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638255150 |
|---|
| Product | hexose transport-related protein, putative |
|---|
| Protein accession | XP_569255 |
|---|
| Protein GI | 58264198 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATCA TCCCCCCCTC CTCCCCCGGG AGTGACCATT CTTTCCCCAC TAGCTCTGGA
GATAAACCTG AGAAGTTCCA GCAAGTTGAT CATCTTGAAG ATGTCGACGT CGAGGATAGT
CGGGGACAAG ACATCCGTAA CAGACACCGC AATGTCAGCG CCAAGTGAGT ACATTTCCTT
TCCTTAATTA CAGAATCTGA TGGCCTCTCT CAGAATTCAA AACCCCCTAT ATGGCCTCTC
AAAGACCAAA CTCTTCAGTA TGGCTGATCA GTTCAGCTCC GACAATGGCT TCGAAGACAA
GCAAGACCTT TTCAGGCGCG CAGCTCTTTT GTCCCAGCGA CCTAATGAGG CTGAAGATAT
CCCAGAACTT ACCGAAGAAG ACAAGCATTG GGTTAGGAGG GAAAAGACAA GTGAGTATTG
GGTAGTCCCT TTTGGCAGTG TTAGCTAGGA CCTCCTCCGT TTGATGGAGT GCTTGACTCG
ATCGTCGGGG CGGGAAGAAC CAAACAATGA AGAGCGGACT TCGCCGCTTT TGCTGAATGG
TCAAAAAACA AGCCAAAGTT CTCCGCTGAC TGACATGCTT TGGTTTCGCA GACCGCTGGG
ATCAGACTCG CTCCCTTTAC TTCCTTGTCA TCGTTTGCAG TATCGGAAGT GCTATCCAAG
GATGGGACAA GTAGGTAACT TCCATGAAAC GTTTTATTGG GCTGACATGA GCCCCACTAT
AGTACGGGAG CCAATGGTGC AAACCTCTCT TTCCCGACCG AGTTTGGAAT TGCAGACAAC
ACATGGCTGG GTAAGTACTG CATGCTAGAT ATTGTATAGA GCCACGCTTA CTTTGTCCTA
GTTGGGATGG TTAACTCTGC CCCCTCTATC ACTGTTGGTG CTGTATCTGC CATGCTCACT
GACCCAATCA ACTACTACAT CGGCCGTCGT GGTACTATTT TTGTGACCGG TCTCTTCTGT
GTCTTCCCCG TACTCTGTCA AGCTTTCACG AGGAACTGGT GGGAATTGTT TATCTGTCGA
ATACTCCTTG GTGTGGGTAT GGGTATGAAG ATTACCACAA TCCCAATCAT GACGGCAGAA
ACGTGAGTTG CAACAACAGC TACGAAACCA GTATAAGATG CTCACCGTGC CGCGTTCAGT
GCTCCGGCGT CCATCAGAGG TGCTCTGGTT ATGTCTTTCC AACTCTGGGT TGCCTTTGGT
ATCTTTTTCG GTTTCTGCTC CAACCTAATG TTCTACCAAA TCGGTCGTAT AGCTTGGCGA
GTCCAGCTAG CTGCTGCCTT TGTTCCTGCG GTGCCCCTTC TCGCTCTGAG TAAGTACATA
TATGAGAAAC TCAAGGCGTT TGCTGATGTA AATTCACAAA GTCTGGTTCG TACCTGAATC
TCCTCGATGG TTGATGAAGA AGATGAGGTA CCGGGAAGCT TTTGCTTCTT TCTGCAGGCT
TAGGAAGTCT GAGATCCAAG CGGCTCGAGA CATGGTACGT CACCGCTCAT TCGGGTATGA
GTATCGACAT TCACTGATTC CATTCCAGTT CTATGCCCAT TGTCAACTTG AAGAAGAGCG
TGAGGCCTTC AAAGGTACCA CGTACTTTTC ACGCTTCAAG GACTTATTTG TCCAGCCCCG
TTTGAGGAGG GCAAACTTGG CTAGTTGGGT TGTGATGATT TCTCAACAGC TTTGTGGAAT
CAACATTATG TGTAAGTCGC TTTTGAAATT ACCGCTTCCA AACCCTCTGC TAATATAAGT
TTCCTGATAG CTTTCTATTC GTCCACCATC TTCTCAGAGG CTGGCTATGA CACCCGTCAA
TGTCTGCTGG CATCTTTTGG TTTCGGCTTG GTCAATACCG TCTTCGCTTT CCCTGCTATC
TGGACTATTG ACACTTTTGG CCGACGTAAC CTTCTTCTCA CCACCTTCCC ATGTATGGCT
CTTATGCTTT TCTGGGCTGG ATCTATGTTC TTCATGGACG AATCTAACTC TGCTCGAGTA
CCTATCCTCG CTCTAGCGAT CTATCTTTTC ACCGCTTTCT ACTCCCCCGG CATGGGCCCA
GTACCATTTG TCTACGCTGC TGAGGCTCAG CCTCTCACGC ATCGAGAAAT TGGTATGAGT
TGGGCTGTGC AACAGAACAA CATGTGGGCA GCGGTGCTTG GTTTGACATT CCCGAGTATG
TTGGTGGCGA TGAAGCCTTG GGGAGCATTC TACTTCTACG CGGGTACCAA TCTTCTCGCT
TGGGTCCTAA TCTTTTTCTT TACCCCTGAG ACTGCGTAAG TAGCAACCTC AATCGTACGT
CTTTTAGCTC TGGCGCTGAC ACTTGGCTAC TTAATCTAGT CAGCGAACTC TTGAGGAACT
GGATTACGTC TTTGCTGTTC CTGTCCCAGT CTTTGCAAAG TACCAAGCGA CAAGGTGGCT
CCCTTGGGTT ATCAAGCGGT ACATTTTCTT CCGCAAAGGA GCTCGCCTTG AGCCACTGTA
CAAGCTTGAA GGTGTTGCGA CTGAGGGGAC AGTGGTGGAA AGGTTCCACT AG
|
|---|
| Protein sequence | MSIIPPSSPG SDHSFPTSSG DKPEKFQQVD HLEDVDVEDS RGQDIRNRHR NVSAKIQNPL
YGLSKTKLFS MADQFSSDNG FEDKQDLFRR AALLSQRPNE AEDIPELTEE DKHWVRREKT
NRWDQTRSLY FLVIVCSIGS AIQGWDNTGA NGANLSFPTE FGIADNTWLV GMVNSAPSIT
VGAVSAMLTD PINYYIGRRG TIFVTGLFCV FPVLCQAFTR NWWELFICRI LLGVGMGMKI
TTIPIMTAET APASIRGALV MSFQLWVAFG IFFGFCSNLM FYQIGRIAWR VQLAAAFVPA
VPLLALIWFV PESPRWLMKK MRYREAFASF CRLRKSEIQA ARDMFYAHCQ LEEEREAFKG
TTYFSRFKDL FVQPRLRRAN LASWVVMISQ QLCGINIMSF YSSTIFSEAG YDTRQCLLAS
FGFGLVNTVF AFPAIWTIDT FGRRNLLLTT FPCMALMLFW AGSMFFMDES NSARVPILAL
AIYLFTAFYS PGMGPVPFVY AAEAQPLTHR EIGMSWAVQQ NNMWAAVLGL TFPSMLVAMK
PWGAFYFYAG TNLLAWVLIF FFTPETAQRT LEELDYVFAV PVPVFAKYQA TRWLPWVIKR
YIFFRKGARL EPLYKLEGVA TEGTVVERFH
|
|---|
| |