Gene CNB04880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB04880 
Symbol 
ID3255847 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand+ 
Start bp1388804 
End bp1389940 
Gene Length1137 bp 
Protein Length259 aa 
Translation table 
GC content51% 
IMG OID638255132 
Product40s ribosomal protein s3ae-a (s1-a), putative 
Protein accessionXP_568980 
Protein GI58263140 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1890] Ribosomal protein S3AE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAAAAACCA CCATGGCTGT CGGCAAGAAC AAGAGGCTTT CAAAGGGAAA GAAGGGAATT 
AAGAAGAAGG TCGTCGACCC CTTCACCAGG AAGGGTGAGT TCGATGAGGA GGATTGGAGC 
ATGACAAGGA GGGATTACTG ACATTCAATG TGTCGTGCTC TTTCCACCAT CCACTACTTC 
ATCTTGGACT ATACCAATCT GGCACACAAA CACAATGAAT CTCGACAGAG TGGTACGACA 
TCAAGGCCCC CTCCTTCTTC GAGAACCGAA ACGCCGGGAA GACTCTTGTC AACCGAACCC 
AGGGTCTCAG TGCGTATAAT CAGAATTGCG GCAAGATGAG ACAAAAGAAT TGGGAGCTGA 
CTGGACTGTC AAACAGAGAA CGCCAACGAC TCTTTGAAGG GCCGAGTCCT CGAGCTTTCT 
CTCGCTGACC TCAACAACGA CCAGGAGCAG TCTTTCAGGA AGATCAAGCT TAGGGTCGAG 
GATGTTGCTG TGCGTTGTAC CGCTCTAGTT GCAATGCGGT ATACGGGTAG CTGACTCTCT 
TCTTATAGGG CAAGAGCTGT CTCACCTCTT TCTACGGCAT GGACTTCACC ACCGACAAGC 
TCCGATCCAT TGTCCGAAAA TGGCAATCTC TCGTCGAGGC TCACGTTGAC GTCAAGACAA 
CTGACGGCTA CGTTCTCCGA CTCTTCGCTA TTGGTTTCAC CAAGCGTCAA TCCAACCAGG 
TCAAGAAGAC CACCTACGCT CAGTCTTCCC AACTCAAGGA GATCAGGGCC AAGATGGTTG 
AGATTATGCG ACGTGAGGCT GAGGGTAGCG ACTTGAAGGA GTTGGTCCAG AAGTTTGTTC 
CGGAGTCTAT CGGCAGGGAG ATTGAGAAGG CCGCCAAGGG CATCTACCCC CTCCACAACG 
TCTACGTCCG AAAGGCTAAG ATCGTCAAGA CCCCCAAGAT TGACATGTCT AAGCTCCTCG 
AATCCCACGG TGAGGCCATG GACGTGAGTA TCTTACTGTT CATTATGTGA GCTCGTGCTG 
ATTGTTGTCA ATAGGCCAAC ACCGGCTCCA AGGTTGTTAA GAGCGGTGAA TTCGTCGAGC 
CCGAGATCCT CGAGTCCGTC TAAGGGTGGT TAGGGATGCA TGTATACCTA TGGCACT
 
Protein sequence
MAVGKNKRLS KGKKGIKKKV VDPFTRKEWY DIKAPSFFEN RNAGKTLVNR TQGLKNANDS 
LKGRVLELSL ADLNNDQEQS FRKIKLRVED VAGKSCLTSF YGMDFTTDKL RSIVRKWQSL 
VEAHVDVKTT DGYVLRLFAI GFTKRQSNQV KKTTYAQSSQ LKEIRAKMVE IMRREAEGSD 
LKELVQKFVP ESIGREIEKA AKGIYPLHNV YVRKAKIVKT PKIDMSKLLE SHGEAMDANT 
GSKVVKSGEF VEPEILESV