Gene CNB04570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB04570 
Symbol 
ID3255774 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand- 
Start bp1310622 
End bp1311730 
Gene Length1109 bp 
Protein Length210 aa 
Translation table 
GC content48% 
IMG OID638255100 
Productpoly(A) binding protein, putative 
Protein accessionXP_569037 
Protein GI58263254 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.0559902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTCAT CATATCCATA TATCACAATG TCCGAGCCTA GAGAATCATC TCCAAGACTT 
AACGAGGATG AGTCTAACGT TGACGAGGTA TGTCTCCGCG TTCTCCACTG CCCAGAGTAT 
ATGTTCTAAC GAGCTCTATA GGAACTTGCC TTGATGCAAG CTCGTCTGGC GGAGATGGAA 
GCCGAGAAGA ATGCTTTGGC TGCATCCACC TCAGCTTCAG GAAATGGCAC ACCTGTGTCA 
CATAATGTTA GCGGAGGGGA GACAAACGAA ACCCATGAGG GGGATGGTAA CATGGAGGAA 
GATGGAGAGT CATCAGAGGC GGTGGATATG CGGAGTGTCT TTATCGGTAA TGTGCGTTTG 
TTGGTCACTT CTCTCCAGGG GATTATAGGT CCCAGGACAG TGAGTGCTAA TGGTTGAGGA 
TAGGTCGACT ATGGAGCAAC GCCGGAGGAG ATTCAGGCGC ACTTTCAAGC GTGTGGAACA 
ATCAACCGAG TGACAATTTT GTGCGACAAA TTCACGGGAC ATCCGAAAGG GTATGTTCAT 
TTCTTCTTTT GGTCCTATTT GTATCTAGCT TCACCTGTGC ACCGGTGGAT TGGCATCTAT 
TAATGCTAGC TCTGGTGCTC AGAAGCGGAA CTAGTCGACC CATCTCGAAA ATGCTGACAT 
TTGGCCCTTA GTTACGCCTA TGTCGAGTTC GCCGAGCCCT CAATTGTTCA GAACGCTTTG 
GTTCTCAACG AAAGCATGTT CAGGGGACGT ATGCTCCAGG TGTGTTAAAT TGGTTCCACG 
TTGACGCAAT AAGACATACT GATTCGTGGT GCCATGCCAA GGTCAAGGAA AAACGAACTA 
ATGTCCCGGG CATGAACATG ACCAACAGAG GCAGGGGGCG AGGACGGGGA CGCGGAGGGT 
TTAGGGCGAG AGGCTTTGGC GGTTACAGAG GGCGTGGCAG GTGGGTTGCT CTCACATGAT 
GACAATCCGA TATAAATGAA GTACTAATGT TCTATTATAG GGGACGCGGA CGAGGATGGT 
AAATCATTTA TATAACTAGA ACAGATAACA GTAATTTACA GCAGTTTATT GGCACTGTCG 
CCAGAATGTA TACCACACGT TTGACTACT
 
Protein sequence
MHSSYPYITM SEPRESSPRL NEDESNVDEE LALMQARLAE MEAEKNALAA STSASGNGTP 
VSHNVSGGET NETHEGDGNM EEDGESSEAV DMRSVFIGNV DYGATPEEIQ AHFQACGTIN 
RVTILCDKFT GHPKGYAYVE FAEPSIVQNA LVLNESMFRG RMLQVKEKRT NVPGMNMTNR 
GRGRGRGRGG FRARGFGGYR GRGRGRGRGW