Gene CNB03700 details

Gene Information

• Locus tag: CNB03700
• ID: 3256006
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: +
• Start bp: 1092463
• End bp: 1099294
• Gene Length: 6832 bp
• Protein Length: 1940 aa
• GC content: 47%
• IMG OID: 638255017
• Product: zeta DNA polymerase, putative
• Protein accession: XP_569204
• Protein GI: 58264096
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0417] DNA polymerase elongation subunit (family B)
• TIGRFAM ID: [TIGR00592] DNA polymerase (pol2)

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.634072
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGACA CCGCGGTCGT CAATCAAGGA CCGTCGTCCT CTTTGCCCGT CGGATCGAGC 
CAATCTTTGA GTCTCAGCAG TCCCCGTCTA CGTGTCAAAA TTACCCATAT CGTCTCGGAT 
CAGGCGGCAC CCATTCCTAC TCTTCGTCAG CACTATGCTC CGTCTCGACT CGCAACCGCC 
ATACCGTTGG GTAATCTACC ACACAGCGTA CCTGTTATCC GGATATTTGG GACCACGTCC 
TCTTCGCAGA AAATTTGTGC CAACATACAC TTGTGCTACC CATACTTTTT TGTACCCTAT 
CCCATGGACT CTCAAGATCC GTTGCGGCCA GAGAGGGTGG TCAAACTTTG TCAAAGATTC 
GCCGTCTCTC TCAACCATGC GATTTGTCTC GCACTTCGGC AAAATCCGAC ATCTGCAGCC 
AACAACACTA ACTACGGCGG TGGTGTGGAC CCAAAGCATT TGCATGTCGT CTCTGTGATC 
CTTGTAAAGG GAACACCATT CTATGGATAT CATCTTGGAT TTGACTACTT TCTCAAAATC 
AATCTGGCAA ATCCGGCAAG ACTGCATATA GCACTCGAGC AACTACGAAA GCCGAATGTG 
CTAGGAAGAG AATGGCAACC GCACGAAGCA CATCTCAATC ACGTTCTACA GTTTATGTGT 
GACTTTGACC TGTATGGTTG CGGATGGTTG GAGCTGGGAG GAGGTACCTT CAGGGAACCC 
GTGCCAGGTG AGAAGGCTAT TATCACACAA GAGTCCCATT AAGCTTACAT GTAAACAGAA 
GCAGATCCGT TTGACTCCCT GTCAGAGACA GTTACCGATG GTACTCTTGG CTTACTTAAC 
TGTCGCACGA TACCCACTTC CATGTTATAC CCCCCAGGCC TCTCTCCTGC GAAGGATTCA 
TTTACTTCCC TTGAAATTGA CATTCTTCCT CACCAGATCC TAAATCGACA GCGACTTATG 
CCCCGTCTAC TGCATCATGA TTTCATTGAG CTGTTACATA AGCCTTTGGA TCCCAACGAA 
AAGCTTGTGC CTGCGGTTGC AGAATTGTGG GAAGATGAAA GGCGAAGGAG AGCGGCTAAA 
GGATTAGGCA CTGGAACAAA TGATATGATG CCAGGTAGCG GCGGGATGGA TGGAAGATCA 
ATGGAGGAAC TTGGGTATAG AGGCAATCAA GTGGATGGGA AGAAGAACAA GGGAGGTGAT 
TGGAAGATCT CAGACGAGCT TTGGGCAATA CTGGAAGAGC GTATGGGCGC TGAGAGGAAG 
AGAAAAGGGA AGCTGACATT CCAGAAATAC TCTCGCGATG TTTCAGCTGG CAGGGAAGGG 
GAAAAATTGC AATGGGATAA GGTACTGTTT ATTTTTCCTC ACATCATTGA GATATGTCTC 
ATGATGAATT CCCAGTGGAT CATGACCACC TTTGATGCTT TATCAGCTCA TTGGCCCAAG 
CAAGCTAAGA AGGTCACCAA GACTACCCAA ATGTCCAGGA AGTCTCACAT GACTCTGCCA 
GCCGACACTT CATCTATATA CTACGGTTCT TCTCAGGATA AGAATGCCCT GTTCGGCGAG 
TCAACATCTG TTACTTTGGA GGAACCGGGA ATGGATTCAA GGTTGGAGAA AGAAGACGAA 
GAGATAAATC CCTTTGAGGC GTTCGCCATG ACTCAGGCTT CTCAACATCC GCAACCAGTA 
CCAGAGCTTT CCCAACATGT TCAAGCAGTC CCATTTAAAG AAGTTGAGGA TTCTGACCAA 
TATTATGTCG GCGAGGACGA GGGTGATATA GACGAGTACA AACAAGCTGA GGGGGCTCGA 
GTGCATGCCC AAGAGACCGA CAAGATACGC GCCACACAAA TGGCGTCTGA GATGGAAGGT 
CATTATGACG AGTACGATGA CAAAGAGCTT GAAGAGTTGT TCAGACAGAC AGTGGCAGCT 
GGCTTGGGAA TCCAGAGCGT GCCCACTACA CCACACAAAC CTAAAGATCA AGACCAGGAA 
GGGAATAGTC GGTGGTCTGG GTGGACTCCG ACAAGCAAAG GATCTAGCAA ATCAAGCGTG 
GGCACTTTCG AGTCACGTAA ACGTAAAAGA AATCAGCGAT TATTAGAGGA CGCTGGATTG 
GGAGATCTCA GGTAAGCCCA GGCATCTTGC CATGTGTCAT ATAGCTACAC GCTCTCAAAA 
GACTTGCTGA TTGATCAGTA CTAGTACAAT CATTGATCGC TCTTCACTTT CTCTGTCGCC 
TCTCAAAAAC CCATACGATG AAAGAGGTCA TGGCGTTTCT ACGCCTGAAA ACGCGAACAC 
ACCTTCCAGA GAGATGGCAA CTCCTAGCTC CCTCATGCGT AATGCATTCG CCAAAAGCCG 
CCAACAATCG CCGAACCTGT CTCCCGCGAA GAGAAGCGAG TCATCCCGAA GTAAACATCT 
TCGTTCTGAT ACTGTTATTC TGCCCTTGGA GAGAAAGAAC CCTGGAGCTA TTACATCCTC 
TCCATCGCTC TCTCCCAGAG ATAAAGTTAT CGATGGTGAC CATGGAAACT TACAAAGAAA 
ATTAGCTGAG GCGAAGAAAC CGCTGCAGGG ACAATTTCCT TCGGCATCGG CGAAAAAAAA 
TCTCGTTGTT GGCCCAGAGC CAGGTCAAGA AGTAGTCCAA TTATCACTTC CTCCAGCCGG 
TGCTGGTCTG TACGAACCAG TTGCGAATGT TGTTTCGCCG GTCGTGTCTA ACAGTTCACG 
CCCCATCGGG CTAGTCGAAT CTCACCTTAG TTCCACTTTG CTCAACCCGT CCTTCAGAGA 
CAAAACCTCA GACTTACCTC TCTCTGCAAC CCTTCTGAAC GCACCCTCCG CCAAACCCGC 
TTTGAGCCCT ACTTTTCAAG ACCCTTCCGC CAACGATGAA CGCCTCCCTA TATCCCCATC 
CATCGTTGCG ACACATCGCG ATGACCGCGA GGCAAAGGTG CGCCCGCACA AACGGGTCAA 
ACTCACAGAA CCAGGTCATG CGAGCCAGGA GTCGCTTTTG CCCCTCATTA GAAATTTCTC 
ACATCCTTCG CATGGAGACA GACATCGGTC GCCACAAAAT GCTGCATCAG ACCACCAGGA 
GAATCTTTCG TCTTGTTTGG CAAGCAAAGC ATGGCAATAT TACATCCTTC CTCCTCAGCG 
CCATGAGATT GCTGATACTA TGGAGTTGCA CGGCGTATCT ACTGTTGACT ACCAACCGCC 
GTTCTTTGGT CAACTGGCCG ATGTACCCAA GAGATCAAAA ACGCTGGCGG GCAGGGTGTT 
CAATCTCAAA TCCCATTCAG TGAGAAATTT GCAAAAATTT GAATCTACGA TCGGCAGTGG 
ACCCCTGCTA GAAAATGCAA AGGGCAAGGA GAGGGCAAAG GCTGGTTGGC TAAAAACAAA 
TAGTGACAAC GATAGTGTTG GGAAAGTGCG TTGGAATTTG GGATGGGAAT ACGCGCCACG 
ACCACCTAGT AAGAGAGAAG TCAAACGTTG GTGTGAAAAA ATCGAAGACA AGGCGAAGAT 
AGCCAGTGAG CAAAATTCAT AAGGAAGTCA GGCATCATTT CTCATATTCG TTATAGGAGA 
AAAATACGAG GAAAAGACGT CACAGGTGAG TGTAACGTTC CGCCATCTAA ACTGCGTCAG 
GCACTGATAA TGGATCAGCT AGCACATCCG ACCCAAAAGA GCAAATATGG CTTCAAATAT 
TCTCAGAAAG GGAAAGTGAG GGATTCTTCC GGCGATCCCC AGAACATGTC GATCTTGACC 
ATGGAAGTAT TTGGTAAGAA GGCACTTCTT CTCAGTATGG CATGTGGGGC TGATTTTATT 
TTTCAAGCTC AATCGCGAGG TACTCTCCTC CCCGACCCCG AAAAAGACGC AGTCACTGCC 
ATTTTCTATT GTTACTCCAA TACCGATGAT GACCTTCCTG ATACAACTAT CTATCCTGGT 
TATCATGCTG GTTATGTCGT AACTAGTGCT CTGGCGAATC CTGCACGGTT GCGCCTCGAC 
GACATTCCAT TTGAAATCGT TGAGGATGAG CTTGCATTGA TCAATTGGGT AATTGACATT 
GTAAAATTTT GGGATCCGGA CGTCCTGGCT GGATGGGAAC TCCACAACTC CTCTTGGGGT 
TACCTTGCTG CGCGTGCGAG TGGAGAATTC GGTAAGTTGA CTTATTGCAA TCACTACGTG 
ACTATGGGCT TATAATCCTA GCTATGGATA TGATGGATCA AATCTCCAGA ATAATATCTG 
GAAGGACCGG CCCACGCAAT GACGGCTACT CTGCCCACCA CTCATCGACA TTTAAGGTCG 
TTGGTAGACA TACTTTGAAT ATATGGCGTA TATGCCGTTC GGAAATCAAT CTTACCCAAT 
ATACTTTTGA GAACGTCGTT TTCCACCTGC TACATCAACG AATCCCACAT TACTCACCCT 
CTAGTCTGAC AGCTTTATGG AAAAGCAAAT ATCCTAGCCA TGCTTGTCGT GTCCTCAAAT 
ACTTCTTTCA AAGAACGGTA ATGTGTATGG AGATACTTGA CCAAGCAGAG ATAATTACAA 
AGACTGCGTG AGTGAATTTG CGAGGAACCA TAAAACGTGT CTTTGACTCT CGGCTATAGG 
GAGTTTGCTC GCGTGTTTGG AGTAGACTTC GCTTCTGTCT TGACCCGAGG CTCTCAATAC 
AAAGTTGAAT CATTTATCTT CCGTATCGCC AAGCCTGAAA GCTTTGTATT GGTATCTCCT 
TCGAAACAGC AGGTAGGTAG TACGTTATCT TCATAGGCTT CCGGCAACTA AGTCTCGTAG 
GTTGGTTTGC AAAACGCCCC GTTCGCTGTG CCACTCATTG CAGAACCGGA GTCCAAATAC 
TACACTCATC CGGTCATTGT CCTGGATTTC CAGTCATTGT ACCCATCCAT CATGATTGCA 
TATAACATAT GTTACTCGAC ATGCTTGGGG AGAGTTGAGA TGTTCAAAGG GACTAACAAA 
TTCGGTTTTA CAAACCTAAA GGTCACAGAG GGCCTCTTGG AACTGTTGAA AGATTACCTC 
ACCGGTAGGT TCATTACTAC TATCATGATA CTTAATCGTC AATGGCTGCT GATTCTTACC 
ATCAGTGACT CCAAATGGAA TGATTTTCGT CAAACCTGCT ATTAGAAAAA GCCTCCTTGC 
TAAAATGCTC GGCGAGATAC TTGATACAAG GGTCATGATC AAACACGCTA TGAAAGGTGC 
AAGAGGTGAT AAGGTTAGTG AATTTTGAAA CGAAGTATGA CTGTATTGTT GACCGATTGG 
CTATAGTCAT TAACCGCCAT GCATAATGCC AGGCAGCTTG GTTTGAAGCT CATGGCGGTA 
TGTGATTCAC CTTTTTCCGA CTTTCGTGAC TAAAACGTTT ATCTATAGAA CGTCACTTAC 
GGCTATACGA GCGCAACCTA CTCTGGCAGA ATGCCTTGCA TTGAAATAGC CGACTCAATC 
GTACAAACAG GTCGGGAGAC TCTTGAGAAG GTAAATCGAC CGACAGCAAA GTGGAATTAC 
ATTCTGATTA ATTAATCGTC TAGGCTCAAG AACTGATTCA TTCGCGCGTT GATTGGGATG 
CTCGCGTCGT CTATGGAGAC ACGGACTCCC TTTTTGTTGC CTTACCAGGT CGTTCAAAGG 
AGCAGGCTTT CAAAATTGGA TATGACATAG CTAATGCTGT GACCGCACTC AATCCGAAGC 
CTGTCAAGCT CAAATTTGAA AAAGTCTACA TGGGCTCAGT ATTGATGGCT AAGAAACGTT 
ACGTGGGATT TAAATACGAG CATCCAGACG ATACAGAGCC ATCTTTTGAT GCAAAAGGTA 
TTGAAACCAT CAGGAGAGAT GGCTTTCCCG CTCAGCAGAA GATGGAAGAG GTTTGTCTAA 
AGTAAGTACA AAGTCACTTC TCATGTGCCG CGCTAATCAC CGAAGCAGGC TACTTTTCCG 
CACGCAGGAT CTATCTAAAG TGAAAGAATT CTGCTTGAAA GAATGGACAA AGATTCTCCA 
GGGTCATGTG TCTATGCAGG ACTTCATCAT CGCAAAGGAA GTACGGTTGG GGACGTATTC 
GTAAATCCTG TCTCTTTCAT TTTATGCTAC ATGTTGGGCT GATAATTTTG ACCTCAGCGA 
AAAAGGTATC CCTCCCCCTG GAGCAGCCGT AGCCTATCGA CGTATCCTCA AGGACCCTCG 
CGACGAACCT CAATACGCCG AGCGAGTTCC GTACCTTATT TCTAATGCTG ATGGTCGACG 
CCTAATTGAC CGCGCTCGCA TGCCCGAGGA GCTCCTTTCC AGTAGATCAT TGAGCATTGA 
TGCTGAATAC TATATTCGTA ATCTGCTAAT CCCGCCCTTA TCGAGGATCT TCAATCTTGT 
TGGAGCAGAT GTAGAAGAGT GGTATGACAG TATGCCAAAG ACCAAGAGAT TGGGAAAGTA 
CGACAAAGCT GGGGGCAAGA TGACCAACAG AGGAAATGGG AAAGGGAAGC AGGGAGAAGC 
AAAAGGACGG GGCTCGAGAA TAGACTCCCA TTTTAGGTCG AGTCACTGCG TTGTGTGTGG 
TATAGAGTCT TCAGACGGTG AGGCACTTGC CATTTGTCTT TTCATATTTT TATGACTGAC 
TACTTCCCCA GTACTATGCC ACCCCTGTCG TCTGGACCCC TCCACGACAT CACATGCCCT 
TCTATCTCGA CTTCATATCG CCCAAGACAA ACTCATTGTT TTGCAAAAGA TATGCGCTTC 
TTGCTCCTCA GTGCCTCCCG CCGAAAAAAT TCTGTGTGAC TCTATTGACT GTCCCAATAC 
CTTTGCTAGA GTGGCGGCTG AAAGAGAGGT GGAAGATCTG GAAGACGTCG GCGAGTTGTT 
ATTGGAATTG AAGCTAGAGG ATGAGAGGCC GGAAATAGAT CTCAGTTGGT AA 

 

Protein sequence

MEDTAVVNQG PSSSLPVGSS QSLSLSSPRL RVKITHIVSD QAAPIPTLRQ HYAPSRLATA 
IPLGNLPHSV PVIRIFGTTS SSQKICANIH LCYPYFFVPY PMDSQDPLRP ERVVKLCQRF 
AVSLNHAICL ALRQNPTSAA NNTNYGGGVD PKHLHVVSVI LVKGTPFYGY HLGFDYFLKI 
NLANPARLHI ALEQLRKPNV LGREWQPHEA HLNHVLQFMC DFDLYGCGWL ELGGGTFREP 
VPGLSPAKDS FTSLEIDILP HQILNRQRLM PRLLHHDFIE LLHKPLDPNE KLVPAVAELW 
EDERRRRAAK GLGTGTNDMM PGSGGMDGRS MEELGYRGNQ VDGKKNKGGD WKISDELWAI 
LEERMGAERK RKGKLTFQKY SRDVSAGREG EKLQWDKWIM TTFDALSAHW PKQAKKVTKT 
TQMSRKSHMT LPADTSSIYY GSSQDKNALF GESTSVTLEE PGMDSRLEKE DEEINPFEAF 
AMTQASQHPQ PVPELSQHVQ AVPFKEVEDS DQYYVGEDEG DIDEYKQAEG ARVHAQETDK 
IRATQMASEM EGHYDEYDDK ELEELFRQTV AAGLGIQSVP TTPHKPKDQD QEGNSRWSGW 
TPTSKGSSKS SVGTFESRKR KRNQRLLEDA GLGDLSTIID RSSLSLSPLK NPYDERGHGV 
STPENANTPS REMATPSSLM RNAFAKSRQQ SPNLSPAKRS ESSRSKHLRS DTVILPLERK 
NPGAITSSPS LSPRDKVIDG DHGNLQRKLA EAKKPLQGQF PSASAKKNLV VGPEPGQEVV 
QLSLPPAGAG LYEPVANVVS PVVSNSSRPI GLVESHLSST LLNPSFRDKT SDLPLSATLL 
NAPSAKPALS PTFQDPSAND ERLPISPSIV ATHRDDREAK VRPHKRVKLT EPGHASQESL 
LPLIRNFSHP SHGDRHRSPQ NAASDHQENL SSCLASKAWQ YYILPPQRHE IADTMELHGV 
STVDYQPPFF GQLADVPKRS KTLAGRVFNL KSHSVRNLQK FESTIGSGPL LENAKGKERA 
KAGWLKTNSD NDSVGKVRWN LGWEYAPRPP SKREVKRWCE KIEDKAKIAR EKYEEKTSQK 
GKVRDSSGDP QNMSILTMEV FAQSRGTLLP DPEKDAVTAI FYCYSNTDDD LPDTTIYPGY 
HAGYVVTSAL ANPARLRLDD IPFEIVEDEL ALINWVIDIV KFWDPDVLAG WELHNSSWGY 
LAARASGEFA MDMMDQISRI ISGRTGPRND GYSAHHSSTF KVVGRHTLNI WRICRSEINL 
TQYTFENVVF HLLHQRIPHY SPSSLTALWK SKYPSHACRV LKYFFQRTVM CMEILDQAEI 
ITKTAEFARV FGVDFASVLT RGSQYKVESF IFRIAKPESF VLVSPSKQQV GLQNAPFAVP 
LIAEPESKYY THPVIVLDFQ SLYPSIMIAY NICYSTCLGR VEMFKGTNKF GFTNLKVTEG 
LLELLKDYLT VTPNGMIFVK PAIRKSLLAK MLGEILDTRV MIKHAMKGAR GDKSLTAMHN 
ARQLGLKLMA NVTYGYTSAT YSGRMPCIEI ADSIVQTGRE TLEKAQELIH SRVDWDARVV 
YGDTDSLFVA LPGRSKEQAF KIGYDIANAV TALNPKPVKL KFEKVYMGSV LMAKKRYVGF 
KYEHPDDTEP SFDAKGIETI RRDGFPAQQK MEEVCLKLLF RTQDLSKVKE FCLKEWTKIL 
QGHVSMQDFI IAKEVRLGTY SEKGIPPPGA AVAYRRILKD PRDEPQYAER VPYLISNADG 
RRLIDRARMP EELLSSRSLS IDAEYYIRNL LIPPLSRIFN LVGADVEEWY DSMPKTKRLG 
KYDKAGGKMT NRGNGKGKQG EAKGRGSRID SHFRSSHCVV CGIESSDVLC HPCRLDPSTT 
SHALLSRLHI AQDKLIVLQK ICASCSSVPP AEKILCDSID CPNTFARVAA EREVEDLEDV 
GELLLELKLE DERPEIDLSW