Gene CNB03590 details

Gene Information

• Locus tag: CNB03590
• ID: 3255845
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: +
• Start bp: 1065470
• End bp: 1067569
• Gene Length: 2100 bp
• Protein Length: 535 aa
• GC content: 49%
• IMG OID: 638255006
• Product: delta 8-sphingolipid desaturase, putative
• Protein accession: XP_569193
• Protein GI: 58264074
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG3239] Fatty acid desaturase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.194503
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCTCG CGCAAAAACC CGTCTGGGAC CGCAACCAGA TAGCCAGCAG GATCACCCAA 
GGCCAACAGC TCGTCGTCTA CCATGACCGC GTGCTCAATG TCACCCCGTG GGCACCATAT 
CACCCTGGCG GTGCTCTCGC CCTGCTTCAC TTTGTCGGAC GCGACGCTAC AAACGAGATA 
GAGGCCTATC ACTCCGACGC TGCTATTGAG ATGATGAACA AGTTTACCGT CGCTAGAGTC 
GACATTGGCA AGAAGGGGTG GCCGCCATTG ACACCGCCTA TCGCTCTGGG GCTGGTCAGA 
CATCCAGACG GTGTCAAAGG ACATTGGGCG CGAGAAGGTC CTGTCACGCT TGGGCAAACT 
ATTCTCCAGC AATCCATATC TCTCGATCCC TCGTCTGCTC CCATACCGCC CGTCCCCAAT 
CCCAATCCGC CGTCTTCGAA TCCAGCTGTA ATTACTCTTG AACCAGCGCA ACTAGAACCA 
CCAGCATCGG CCGTAGACAT GGAAAAGGAG GAACAAAGGT CAGAAGACTA TCGACAGTTG 
AAAAAGCGTC TAGTAGAGGC GGGTCTGTTC AAACCGCCAG GACCGTTGGC CGGGTACGGC 
ACCGATATCA TCCGGTATAG TTTATTAGCT TTCGGAGCGC TTTACCTCTA TTTCAAGTAG 
GTCAAAAACT TTTTGTGGCT TTTTATGCTG ACTTGTGAAG CACCACTGGC TGGCTTGGAC 
AAATGGGATC TGCCACTTGC CTTGGTCTAT TATTCCATCA ATTAGCTTGT AAGTGTACCG 
ACAAGACCTC TCCATGACGC TCTGCTCATT TCCCAAAAGT CGTGGTACAC GACGCGGGTC 
ATACAGAGGT GACAGGGGTC TGGTGGTGGG ACAGAGTCAT TGGCATGACT GTCGCGAGCT 
GGATCGGCGG TTTGAGCTGT GGCTGGTGGT GTGACGTGAG TCTAAATAAC AAGGAATTCT 
TTGATAAAAA AGAAAAAAAA AACTGACTGG GACTGCCCCT AGAATCATGA TATCCATCAT 
CGTTCGTTTA TTCACTGGAG AGACCAATCA CAGCCGATTT ACTTACTCAC CACACAATAC 
AGTCGTCACC AATCATCCCG AGCATGACCC CGACATTCAG CATATCCCAT TTTTCGCCAT 
TTCAAAAGAA TTCTTCAACA GCCTCTGGTC CACGTACTAC AAAAGGACGA TGTTGCTTGA 
CGCTTTTGCC AAAATTATGA TTCCTTTTCA GTATGTCCAA GCGCTATACT CTCTCCCAGC 
ATTGATCCGA GTACTCATCG GGCGTTAACT GCAGGCATAA TCTCTACTAC ATCGTTCTGT 
CGCTCGCCCG ATTCAACCTT TACGCCAACT CGTACATGTA TCTCTTAGGA CCCAAGCCCA 
GACGGAATGC TTTCTGGGCA TACGAAATCG CGGGTATCGT TTTCTATTGG GTGTACTATG 
GCTCTATGCT TCGACACCTC CCTTCTTGGC AGATGAGACT GGGGTACCTC TTGATCAGCC 
ATATCATGGC CAGCCCGGTC CATGTTCAGG TAAGGTCCTC ATTTTAGATC ATTATTGTCG 
CCCCCCCCCC CCCCCCCCCC TGCACACCAA GCTAACATTT TCGCAGATCG TACTGTCTCA 
TTTTGCGTGT TCGACTGAAG ACCTTGGACC TGCGGAATCA TTCCCCTCTC GTCAACTTCG 
TACGACGATG GACGTCATTT GCGATCAGAA CGTTGAATGG ATACATGGCG GCCTCAACCT 
GCAAGTGACG CACCATCTTT TCCCCAGACT TCCTAGGCAT AATCTCCGAG CTGCAAGTAT 
GCTGGTGAAA GAGTACTGCA AGGAGCATGA TATCGTTTAT AGAGAGCATC TCTTCATTGA 
AGGGTGAGTA AAAATATTGC TTTCAACCAA AAAGAATTTA TTGATGGACC ATTTTGGATA 
GGAACCGACA TGTCTTGAGC ACACTTAGAG ATGTCGCCAA TCAGCTAAAC CTTCTCAAAA 
AGGTTGCTGA TAAAGAGATT GATGAAAGAA TGGGAAGGCG ACGAGATTAG AAGGGGATTA 
GAATATCTGT TTTAACATTT TTTTTTCAAC TTTTCTCTGT GTTGTCCATC ACAAACAACA 

 

Protein sequence

MTLAQKPVWD RNQIASRITQ GQQLVVYHDR VLNVTPWAPY HPGGALALLH FVGRDATNEI 
EAYHSDAAIE MMNKFTVARV DIGKKGWPPL TPPIALGLVR HPDGVKGHWA REGPVTLGQT 
ILQQSISLDP SSAPIPPVPN PNPPSSNPAV ITLEPAQLEP PASAVDMEKE EQRSEDYRQL 
KKRLVEAGLF KPPGPLAGYG TDIIRYSLLA FGALYLYFNT TGWLGQMGSA TCLGLLFHQL 
AFVVHDAGHT EVTGVWWWDR VIGMTVASWI GGLSCGWWCD NHDIHHLVTN HPEHDPDIQH 
IPFFAISKEF FNSLWSTYYK RTMLLDAFAK IMIPFQHNLY YIVLSLARFN LYANSYMYLL 
GPKPRRNAFW AYEIAGIVFY WVYYGSMLRH LPSWQMRLGY LLISHIMASP VHVQIVLSHF 
ACSTEDLGPA ESFPSRQLRT TMDVICDQNV EWIHGGLNLQ VTHHLFPRLP RHNLRAASML 
VKEYCKEHDI VYREHLFIEG NRHVLSTLRD VANQLNLLKK VADKEIDERM GRRRD