Gene CNB03050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB03050 
Symbol 
ID3256044 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp925522 
End bp926100 
Gene Length579 bp 
Protein Length111 aa 
Translation table 
GC content45% 
IMG OID638254949 
Productpre-mRNA splicing factor, putative 
Protein accessionXP_569020 
Protein GI58263220 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.03026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTAAG TAACGCACCA TCATCTGGTT TACAATGCTC TAATGCCTTG ACTTTGAAAC 
AGTCAATACG CCCACGTCCC TAAATCCGAG CTTGACGAAG CCCAAATACG AGAGCTTGAA
GAGTATGAAA TCTCTCAAGG CCCTTTATCG GTCCTTCAAC AATCCGTCCG CAACTCTTCT
CAGGTACTTA TCTCACTGCG GAATAACAAG AAACTTCTGG CGAGAGTGAA GGCGTTCGAC
AGGCATTGCA ACATGGTCTT GGAGAACGTA AAGGAAGTGA GTGTATGCAT GGTGTGGCTA
GCGAAAGGCA AGCCTAGAAT TAATGATAGA TGTTGACAAT TTGGTACCTG TAGATGTGGA
CGGAGACACC AAAGGGCAAA GGGAAAAAGC CGGTGAACAA GGACCGTTTC ATCTCGTGAG
TGAATCTCTG CATCTTTTAC GCAAATCTCA TTGACACTCC TTGTGTAAGA AAAATGTTTC
TTCGAGGTGA CTCTGTGATT CTTGGTAGGT TTTCCTTGGT CTGCGAACGT CGCAATATTT
GCTAACGGCA ACCTTGTAGT TCTTCGTAAT GCAGCCTAG
 
Protein sequence
MSQYAHVPKS ELDEAQIREL EEYEISQGPL SVLQQSVRNS SQVLISLRNN KKLLARVKAF 
DRHCNMVLEN VKEMWTETPK GKGKKPVNKD RFISKMFLRG DSVILVLRNA A