| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB01300 |
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| Symbol | |
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| ID | 3256000 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006684 |
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| Strand | + |
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| Start bp | 395042 |
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| End bp | 397620 |
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| Gene Length | 2579 bp |
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| Protein Length | 686 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638254780 |
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| Product | VpsB, putative |
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| Protein accession | XP_568802 |
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| Protein GI | 58262784 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5158] Proteins involved in synaptic transmission and general secretion, Sec1 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTCTCGACTT GTTCCTTTTC TACCCGTATC ATCCAACCCA CAGGGTATAA CACAGCATGG
ATGTCACAAA AGCGATACAG ACTTACCTCT TCAAAATGAT AAATCAGGTC CCGGGGATGA
AGGTCCTTCT CTTGGACTCT CATACCGTAC GCCGTCTGTC CACCGCTATT CGCGCCATGG
AAGCTGACGT TGTGATATAG ACACCAATAG TATCTCTAGT CACCACTCAA AGCGAGCTTT
TGTCCCATGA GATCTATCTT GTGGACAGAA TAGACAAGTA TATCCCTCAG AAACTTAGGG
GGTTACAGAT ACACTGACAT CGAGCATCAT AGTAATTCTC GCGAGGCACT CAACCATCTT
TCGTGCATCG CCTTCCTCTC ACCCTCAGGT TCATCGATAG AAGCAGTGAA AACGGAGCTG
GCCAAACCTC GATATGGAAA CTACTGGCTT TTCTTCTCCA ACGTGCTCTC CAAGGCGCAG
ATCGAGGAGA TGGCAAGTGT AGATGAGCTA GAAGTCGTCA AAGAGGTTCA GGTATGTAAT
AGCCAATAGA GATCTGAATT AGAGGGCTAA CACTGGCCTA GGAATACTTT GCAGACTATC
TAGCGCATTA TCCGTCACAT TGGAGTATAA CTCAAGCTGC CTTGGCAGAT GGCGGCGATG
GCCCGTCCAA TGTATGCCTT GTCGCCACGT TCAGATCTTC AATCAAACAC TGACGATATC
TACAGCCACC AATCTATCTT CCATTACCCC TCCACCTTCC ACCGCCCACA TTAAACTCTC
ATCTCAGCAC TATCCTCTCT GTGCTCTTAT CATTAAAGAA ACGCCCGGTT ATTCGATGGG
AACGCATGTC TCAGGCGGGC AGAATGCTTG CGCAAGCAGT ATCAGGAGAG ATGAATCAGG
GAAAGTACCG GGATCTATTC GAGTTTAGGG GAACTCAAGG CCCAGCACCA CTCTTACTTA
TATTAGATCG ACGGAATGAC CCAGTGACAC CGTTATTGAC ACAATGGACA TACCAAGCCA
TGGTCCATGA GTTGTTCGGC ATCACCAATG GCCGAGTCCA TCTCGATTCT GAAACGAAAC
CCGAGCTCCG AGACCTTATA CTGTCGCCCT CATCTGACCC CTTTTACTCG GAAAATCTCT
TTTCCAATTT TGGTGATTTG GGCGCATCGA TTGCCTCTTA TGTCCATTCG TATCAATCGC
GCAACGCTGC CCTCACAGGA GGCAAGTCGA ACAACAGGTT AGAGACTGTG GCGGATATGA
AGAGGTTTGT GGAAGAGTAC CCCGAATTTA AGAGATTAGG TGGCAACGTC AGTAAGCATG
TCACAATTGT CGGCGAATTG AGTAAAGTGG TGGAAAGGGA TGGATTGTTG GAAGTCAGCG
AGGTCGAACA GAGTTTGGCA AGTCAAGAAA GTCATGCGGC GGATCTCAAG GTTAGTCGAA
AAGAAAAGGA AAAAAAATCC TTTCTCAAAA GCCTTTCAGT CATGCTAACG GTCAACGCAG
AGCGTAATGA CCCTCTTGGC CTCTTCCAGG GTTCCTTCCC CAAACAAACT TCGACTCGCC
ATCCTCTATG CTCTCCGCTA TCAAAAATCC CCATCCGCTC AAATTCCTCA AGTAGTCAGC
ACCCTCATCT CCAACGGTGT CCCTCCTGAA CGCGCACGCC TCGTATACGC CATGCTTAAC
TTTGCAGGTG CAGATATCAG ACAAGATGAT TTGTTTATGA ACGAGAACTT TTTCTCCCGA
GGGAAGTCTG CACTCAAGGG ACTGAAGGGT GTAGAAAATG TGTTTACTCA ACATACGCCC
CATCTATCAC AGACTTTGGA TCTTTTGTTG AAAGGGAGAT TAAGGGAGAC GAGTTATCCA
TTCTTGGAGG GTGACGAATC GGCTCGAACT CAGAGGTTTG TCGCATATAT CATTTCCCCC
TCCTCCCTTG ACTGATGGGA TCAGCTGACG CAGACCATCC TAGACCACAA GATATTATCA
TCTTCATGCT GGGTGGAACA ACATATGAAG AAGCTCGCGC CGTCGCGTTG CTCAATCGAA
AGCTCGCAAC TGACGCCGCT GGTGGCCCAG GAGGAACGCG GATCTTGTTA GGTGGCAGTA
CCATCCATAA CTCTTCCAGG TAATTATTAT TTTTTGTACC CGCAAGAAAC AAAAGGTCAG
GAAAAAGCTT ACCAAAAAAA TAAAAAAAAT GGAACAGTTT CTTGGACATG GTGGAAGCTG
CTGCCGAACA CTTCCCTCAA GATATCTGGC AACCTCCAAT GGGTCTTTCA GCAACCACGT
CCACCGTGCC CAGTAATTCA GTCACGCCAG GCCCATCAAC AAGCGGAGTG AGTCTAAGAG
CAGGCGGGTA CGAACTCTCT GTTGGTGGGA CAGCAGGTTC TGGGCTGTAT AGGTCCAATC
CGGGTGAAGT GGGAGCCAGC TTTGAGATTC CAAAGATTGA TCAAGTTGCG GGTGGGATAC
GGGATGGAGC AGGGAGATTA TGGGGGAACA TGAAGCAAAG GGTCGAAGAA AGAGTCAGTA
GAGGAGGCAC TCCTCAGGGT CAATAAGCTA GTTAGCTAGC TAGCTAGCAG GGGATCGTA
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| Protein sequence | MDVTKAIQTY LFKMINQVPG MKVLLLDSHT TPIVSLVTTQ SELLSHEIYL VDRIDNNSRE
ALNHLSCIAF LSPSGSSIEA VKTELAKPRY GNYWLFFSNV LSKAQIEEMA SVDELEVVKE
VQEYFADYLA HYPSHWSITQ AALADGGDGP SNPPIYLPLP LHLPPPTLNS HLSTILSVLL
SLKKRPVIRW ERMSQAGRML AQAVSGEMNQ GKYRDLFEFR GTQGPAPLLL ILDRRNDPVT
PLLTQWTYQA MVHELFGITN GRVHLDSETK PELRDLILSP SSDPFYSENL FSNFGDLGAS
IASYVHSYQS RNAALTGGKS NNRLETVADM KRFVEEYPEF KRLGGNVSKH VTIVGELSKV
VERDGLLEVS EVEQSLASQE SHAADLKSVM TLLASSRVPS PNKLRLAILY ALRYQKSPSA
QIPQVVSTLI SNGVPPERAR LVYAMLNFAG ADIRQDDLFM NENFFSRGKS ALKGLKGVEN
VFTQHTPHLS QTLDLLLKGR LRETSYPFLE GDESARTQRP QDIIIFMLGG TTYEEARAVA
LLNRKLATDA AGGPGGTRIL LGGSTIHNSS SFLDMVEAAA EHFPQDIWQP PMGLSATTST
VPSNSVTPGP STSGVSLRAG GYELSVGGTA GSGLYRSNPG EVGASFEIPK IDQVAGGIRD
GAGRLWGNMK QRVEERVSRG GTPQGQ
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