| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB01090 |
|---|
| Symbol | |
|---|
| ID | 3255796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | + |
|---|
| Start bp | 329903 |
|---|
| End bp | 334338 |
|---|
| Gene Length | 4436 bp |
|---|
| Protein Length | 1228 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638254760 |
|---|
| Product | GTPase, putative |
|---|
| Protein accession | XP_569115 |
|---|
| Protein GI | 58263410 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00491] translation initiation factor aIF-2/yIF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.560658 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CACAAGCAAA AATGCCGCCA AAAAACAAGG TAAAGAAGGG CGGGAAGAAG AACCTCGATG
ATGACGAGTT CTGGTGCGTT CAACTCTGCT GCAATGTCCG TCTTGAGCTC ACTTGCCGTG
CCACTTCCCA GGGAGAAAAA GGAAGCTGCT CTCGACCAAT CCGAGGCCCC TATTCAAGCC
GATGAGGCAC CCGAGAAGGA TAGCAAAGCC GGTAACAGTC TTTTTGACCT TTTGGAGGAT
GGAGACGCTG TGTCGGATGA AGAGGGCGGC GGATTGATGG TGTGTCCTCT TCATGTCCTC
AACTTCCCAG TTTGCCACTG GCTGACATGT CATTAGGCCA CTATTGCTGC CAACGCCGCG
AAAAAGGATA AGAAAAAGAA GAAAAAGGCC TCAAAGTTTG CCGATCTCGA TGACGAGGTT
GATGAGGCTG AACCTTCCCC CGCCGTCGAC ACCAAACCCA ACTTGGATGA TGAATGGCCC
GAAGAGGATG TCAAGCCGAA GAAGGGAAAG AAAGGGAAGA AGGACAAGAA GAAGGCTGTG
GAAGAGGATG AGGAGCTTGA CGAGATAACG GCTCCGGCTG ATGAGCAACC AGAGCCCATC
ACAGCCGTGA ACCCCGATGA CGAATGGCCC GAGGAGGATG TCAAGCCCAA GAAGGGTAAG
AAGGGAAAGA AGGGAAAGAA GGTTGAAGAG GAAGAGGACA TTGATGCCAT CTTGGAGAAG
GCTGCCGCTG AGCGAAAGGC TCAAGAGGCC GTCGCTGCTC CTGCCAAGGC GACGCCGGAA
CCCGAGGCGG AGGAGGCCGA GGAGGCCGAG GATGAGGGAC CTAAAATCCT TTCCAAGGCT
CAGAAGGAGA AGCTCAAGAA GGAGAAGGAG AAGGTAATTA ACTACACCTC CATGCTATGC
CATCTTATGC TGACATTCAT CTCTAGGCCA AGAAGAAGGC TCAGGCTGCC GCCAAGAAGG
CTCAAGCTAC TCCCACCGAA TCCCCGGCCG AGCCTACTGA AATTGCCGAG GCTGAGGAAG
ATGAAGGCGA CGAAGAGGGC GCCGCCGGAG GTGATAAGAA GAAAAAGAAG AAGAAGAAGG
CTGCTGCTAA ACCAGCTGAG CCTGTCCCTT CTGCCAAGGG CAAGAAAATC CCTGCTCATA
TTGCCGCGAT GCAGGCCGCT ATGGAGGAAA GGCGACGATT GGAGGAGGAG GCTCAGAAGG
CTGAGGAAGA GAGGTTGAAG AAGATTGAAG AGGAAGAGGC GAGGATTGCT GCTGAAGAAG
CTGCGGAGGC GGAGGCCAAG GCGGCGAAGA AGGCCAAGGA GAAGGAGAAA CTCGCAAAGG
CCAAGGCTGA AGGGAAATTA TTGACTCCTG CGCAGAAGAG GGAAAGGGCG GCTGCCGAGG
CCAGAAAACA AGCCATGTTG GCGGCTGGTA TGGTTGTTGC TGGTTTACAG GAAGGTGGTG
CGGCGGAAAA GAAGAAGAAG CCTGTCTATG GTAACAAGAA GAAACAACAA CAGCAGCAAC
AAAAGCCCAA GGAAACCCCT ACTCCTACCA CTACCGCTCC AGCCGCTCCT GCACCTGAAT
CCGAAGCCCC CAAGGCCGAG GAGAAGAAGG AAGAAAACGA GGACGATTGG GACAAGTCTG
ATAACGAGGT GAAGAAGGCT ACCGCTGCCG TTGAAAAGCT CAAAGTTGAG GAGTCTGAGG
ATGACTGGGA CAAGTCTGAC GAAGAGCCTG CTCCTGAGCC TGCCAGGGCT AGTACCCCTG
CTGCTAAAGA AGCTCCCGCC AGCCCCGCAA AGAATGTGGC CGAAAAGCCT GCAGAGAAGG
CCGCTGCTTC CACCCAAACT CAGCCTGCTC CTAAGGCCGC CAGTGCCCCT GCAAAGGCAA
ATGGCAAGCC TGCCCCTGCC CCTGCCGAAG AGTCTTCCTC TGAGGAAGAG GAATCTTCTT
CTGAAGAAGA GTCTTCCGAT GAAGACTCTG ACGAGGACTC TGATGAGGAC TCCGATGATG
AGCTCGCCGC CCGAAAAGCC AAGGCTTTGC AGAAAATCCA GGAAAGAAGG GAGGCAGCAC
AAGCAGCAAA GAGCAGCGAC GATTTGCGAT CTCCTATCTG TTGTATTTTG GGTCACGTCG
ACACTGGTAA GACCAAGTTG CTTGACAAGG TATGTCCTTC GGCTGGTAGA TGAGAACAGT
TTCACTGATT ACTACCATTA GATCCGACAA ACCTCTGTCC AAGAGGGTGA AGCCGGTGGT
ATCACTCAGC AAATCGGTGC CACATTCTTC CCCAGGTCTG CTATTGAAGA GAAGACCGAG
GTCGTCAACA AGGTTCGCAT TGCTATCCCT CTATATGAAG ATGTCCTACT TATCTACGCT
TTACAGGACC ATGCCTACAA AGTCCAGATC CCTGGTTTGC TCATTATCGA CACTCCCGGT
CACGAGTCTT TCACTAACCT CCGATCCCGT GGTTCTTCCC TCTGTAACAT TGCCATCTTG
GTCGTTGACA TTACTGTAAA CACTTTTCTT TTTTCCTTTT GACTTGTGTC TAACACTTCT
TTCAGCACGG TCTTGAGCCC CAGACTATTG AGTCTCTTAA CCTTCTCCGA CAGGGCCGAA
CTCCTTTCAT CGTTGCCCTC AACAAGATTG ATAGGATGTA CGGCTGGAAG GCCTCGCCTA
ACGCCGGTTT CCGAGAGACT CTCAACGCCC AGTCCAAATC TGTTCGATCA GAGTTTGATG
ACCGTGTGGC CAAGACCAAG CTTGCATTCG CCGAGCAAGG TCTCAACGCC GAGATCTTTG
ACGAGAACAA GAACCTTGGT CGTAACATCT CCCTCGTGCC CACCTCTGCC GTTACCGGCG
AGGGTATTCC TGACATGCTG ATGTTGCTCG TCAAGCTCAC TCAAGAAAGA ATGAACGCCA
ACTTGATGTA CATCTCTGAA CTTGAATGTA CTATTCTTGA AGTTAAAGTC ATCGAAGGTT
TGGGTACAAC TGTCGACGTT GTCTTATCCA ACGGTGTGAT GCGTGAGGGT GACAAGATTG
TGTTATGTGG AACAGACGGA CCGATCGTTA CGCAGGTCAG AGCGTTGCTC ACGCCTCAGC
CCATGCGAGA AATGCGTATT AAAGTAAGTT TCGAGGTTGA TCTAGCTTGG CTATGACTGA
TGTTGCATTT AGGGTCAATA CGTCCACCAC AAAGAAGTCA AAGCGGCTTT GGGTGTCAAG
ATCTCTGCCC CTGGTCTCGA AAAGGCGATT GCTGGTGCCC GTCTGTATGT TGCTCAGGAT
GACGACGAGG TTGAAGCGTT CAAGGACATG GCTATGGACG ATCTTACTTC GCTTGGGCGA
TTTGTGACCA AGTCTGGCAA GGGTGTCTGG GTACAAGCCA GTACTTTGGG TTCCCTTGAA
GCCCTTCTTA CTTTCTTGGA ACAGATGAAG ATCCCTGTGT TCAACTTTGG CATCGGACCT
GTGCACAAGA GTACTATTGT CAAGGCTGGT ACCATGTTGG ACAAAGCACC CGAATATGCC
GTCATATTGG CGTTCGATGT CCAGATCGAG AAGGAGGCTC AGGAGTTGGC CCAGAAGGCT
GGTATGAAGA TCTTCTCTGG TAAGTTTGAT TTTGAACTCC TTCATGGATC GTGTAGCTAA
CTCTTGGCCA CCTTAGCTAT GATTATCTAC CACCTCTTCG ATGCTTTCAC CAAGTACATG
TCTGAGGTTC AGGAAGCCAA GAGGAAGGAG GCCGCCCCTA ACGCTGTCTG GCCTGTTCGT
CTCAAGATCC TGAAGGCCTT TGCCCACCGA GACCCCATCA TTCTGGGTTG TGACATCATT
GAGGGTACTA TGCGCATTGG GACACCGATG GGTGTAGTGA AGGTCGACAA GGAGACTGGA
AAGAGAGAGG TTGTTCCTTT GGGTAAAATG TAAGTGCTTT GCTGCATGTG TGATCGGTTG
AGTAACTTAT TAATCAATCT ATAGCACCTC GATTGAGATC AACCACAAGC CATTCGAGGT
TGTCAAGAGG TCGCAGATTG GTGCGGGAGC TGCTGTCAAG ATTGAGCGTG CACCTCATCA
ATCTGCCAAG CTTTATGGAC GACAGTGAGT AATAGCGGCT TCTAGTCCCA AAACGGGTTA
GCTAATGGCA ATTGTAGCTT TGACGACAAA GACGAGGTTG TATCTTTAAT CTCAAGACAA
AGTATTGACA CCCTTAGTGA GTCGTTCTCA TTCGTGCGAT TGTGGTGATC ACTGCTGACC
AAAGTCTCTG CAGAGGCCAA CTTCCGAGAC CAAGTCGAAC TTTCCGACTG GGCGATGATC
AAGAAGATGA AGGTCGAACA AGGTGTCCCA TAAACAGTTG TCGACACTTT CAAAACGTCG
TTTGCCCTGG TGGCATTCTC GCATCTCTTG TGGCATGGAT CTCGTACATT GTGAACCGTA
ATCGTTGTGG CATGCATCAT AAAAGTTAAT AGTCAATTTA TAGAAGGAGG ATGAAG
|
|---|
| Protein sequence | MPPKNKVKKG GKKNLDDDEF WEKKEAALDQ SEAPIQADEA PEKDSKAGNS LFDLLEDGDA
VSDEEGGGLM ATIAANAAKK DKKKKKKASK FADLDDEVDE AEPSPAVDTK PNLDDEWPEE
DVKPKKGKKG KKDKKKAVEE DEELDEITAP ADEQPEPITA VNPDDEWPEE DVKPKKGKKG
KKGKKVEEEE DIDAILEKAA AERKAQEAVA APAKATPEPE AEEAEEAEDE GPKILSKAQK
EKLKKEKEKA KKKAQAAAKK AQATPTESPA EPTEIAEAEE DEGDEEGAAG GDKKKKKKKK
AAAKPAEPVP SAKGKKIPAH IAAMQAAMEE RRRLEEEAQK AEEERLKKIE EEEARIAAEE
AAEAEAKAAK KAKEKEKLAK AKAEGKLLTP AQKRERAAAE ARKQAMLAAG MVVAGLQEGG
AAEKKKKPVY GNKKKQQQQQ QKPKETPTPT TTAPAAPAPE SEAPKAEEKK EENEDDWDKS
DNEVKKATAA VEKLKVEESE DDWDKSDEEP APEPARASTP AAKEAPASPA KNVAEKPAEK
AAASTQTQPA PKAASAPAKA NGKPAPAPAE ESSSEEEESS SEEESSDEDS DEDSDEDSDD
ELAARKAKAL QKIQERREAA QAAKSSDDLR SPICCILGHV DTGKTKLLDK IRQTSVQEGE
AGGITQQIGA TFFPRSAIEE KTEVVNKDHA YKVQIPGLLI IDTPGHESFT NLRSRGSSLC
NIAILVVDIT HGLEPQTIES LNLLRQGRTP FIVALNKIDR MYGWKASPNA GFRETLNAQS
KSVRSEFDDR VAKTKLAFAE QGLNAEIFDE NKNLGRNISL VPTSAVTGEG IPDMLMLLVK
LTQERMNANL MYISELECTI LEVKVIEGLG TTVDVVLSNG VMREGDKIVL CGTDGPIVTQ
VRALLTPQPM REMRIKGQYV HHKEVKAALG VKISAPGLEK AIAGARLYVA QDDDEVEAFK
DMAMDDLTSL GRFVTKSGKG VWVQASTLGS LEALLTFLEQ MKIPVFNFGI GPVHKSTIVK
AGTMLDKAPE YAVILAFDVQ IEKEAQELAQ KAGMKIFSAM IIYHLFDAFT KYMSEVQEAK
RKEAAPNAVW PVRLKILKAF AHRDPIILGC DIIEGTMRIG TPMGVVKVDK ETGKREVVPL
GKITSIEINH KPFEVVKRSQ IGAGAAVKIE RAPHQSAKLY GRHFDDKDEV VSLISRQSID
TLKANFRDQV ELSDWAMIKK MKVEQGVP
|
|---|
| |