Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB01080 |
Symbol | |
ID | 3255787 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | - |
Start bp | 327744 |
End bp | 329632 |
Gene Length | 1889 bp |
Protein Length | 554 aa |
Translation table | |
GC content | 50% |
IMG OID | 638254759 |
Product | conserved hypothetical protein |
Protein accession | XP_569114 |
Protein GI | 58263408 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.160096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CAGCTGTGCA TGTGCCAGCC CAGATCCGGC CACCCCGAGA ATGCCCACAA ATCACGCAGA GCAGTATGAG CTGCCAGCAT TCCCGTCGTC TCCAGAGGCA GGGCCCTCCA GACTGCCACG GCCACAGCGG AGAAGAGCCT CTACCTGGAC AAAGTCACGC ACCCTCACTC TACACCCGAC AACCTCCGCC GCAAATCTTC TCTTCTCAGC GCCCTCCGGC GCTTTTCCCG CTACACGCCA AAGACATGGC CGCACTCGCC CACAATCAAA TACTGATCAG TCTGAGGAGC CAAGACTTCA CCGAGCTACT TTCCTCAGTG AGGATCCGTA CGATGATTCA GAAGAGGTTG ACTTGCCTGA CTTCGGTCAC ATACTGGGTT TCAACGATGA GGGCGAGGAC CATTTTGCGG TGGCCTCTGG TATGCGGACT AGGTGGAAGC GAAAACTATA TCTTTTGATG GAAGAACCAG CAAGTGGTCG AGAGGCATTT TTCGTTCATA TTATCGTCAC CGGGGCTATT ATATTCAGGC AAGTTCATAT TTTCGCAGTG GCATACCTTA ATAACCCTAA TCCGGCATGT ATAGCGCGAT ACTTACAACT CTATCCACCA TGCCTGCGTT CCATATGGAA CCCATTATCA TCAAGGCCCT TTTCGGTCTT GACACCACTA TTGTCGTTCT TTTCACCATT GAATACCTTG CTCGATCATT AGCACATTCA GGTTCCTGGG CGCAGTATTA CTCATGGGCA ACATCTTTCT TTGGCCTTCT TGACCTCGTC GCTATATTGC CTTACTATAT CGAGGTCGCG CAAAACGAGG ACACCACCAT CCTTTTCCGG TTTTCAATCC TAAGGACGTT TAGGCTTTTA CGAGTCTTTC GGGCGTTCAA GTATCAAAAT CAGATGCTTC TGACTATTGA GGTCATGTAT GTTGCTGTGA GGCGCTCGAG AGATGCGCTT TGGGCCTTGA CATTTTTCAT CATCCTCGTG CTTGTGCTCT TTTCAACCCT CATATACTTT GCCGAGCGCG GTACATGGGA TCCCTCACTA TCCGCATTCA TTGATTCCGA CGGCGACCCC TCTGCTTTCG ATTCCATTCC CAGAACGGCA TGGTTTTCCC TCGTCACCAT GAGCACGGTG GGATATGGTG AAGTCGTGCC AAAAAGCTTT TTGGGGAAGC TTTTGACAAT ACCTTTACTC ATGTTTGGGT TACTTCTCAT CGCCTTGCCA AGTTTCGTCC TGGGCCGAAA TTTTGCCATA GTGTTTGACG CCATGACCAG GCAGTTGCCG AAAAATGTAC GTCGTCAAAT TATCAAGTGA TTTAATGGCA ATCTAACAGC TCTCAATTCA GGTCTCTTCC CGTATGCCCA CTCCACGCGA ATCCATTGAA CAAACCAGAA CCGCTCAGGC ATCAACAGAC AACATCCCAC TCCTCCCTGT ATCATCGCAA AATACCCAGA CTGCCACTCC CAACGGCCCT TCCTTGTCCA GACCTCGGTC AGCCTCCCCA TTTCCTGCTT CAGGGACAGT GGATCAGAGA GCGGCATTTG GCAATGCTCC GCGGATGTGG CAAGGTGGAA TAGATGGGAC GGGAGAGACG AAGAGGGAGA GAGATCTCAC CAACACTAAA CTGGCCAAGA ACCAATTAGT AAGTAATGAT TCTCGCAACA AGAGTCATCA AGCATTAACA GTTGAGATAG GTTCTCTTTG AACAAATAGA CGCACTTAGA CAAACGATAG ATAAGCAAGG GGAAATGCTT GCGCGATTAA CAGAGATGCT GAATGTCAAA GACAAGGGAA AGGGCCCCGA AAAATCCAAG GGGCTGCAAG AAGACCACTT CGCATTGGGA GATAGTGGAG AGGAATAATG GCTATGCTTG AGGACGTAT
|
Protein sequence | MPTNHAEQYE LPAFPSSPEA GPSRLPRPQR RRASTWTKSR TLTLHPTTSA ANLLFSAPSG AFPATRQRHG RTRPQSNTDQ SEEPRLHRAT FLSEDPYDDS EEVDLPDFGH ILGFNDEGED HFAVASGMRT RWKRKLYLLM EEPASGREAF FVHIIVTGAI IFSAILTTLS TMPAFHMEPI IIKALFGLDT TIVVLFTIEY LARSLAHSGS WAQYYSWATS FFGLLDLVAI LPYYIEVAQN EDTTILFRFS ILRTFRLLRV FRAFKYQNQM LLTIEVMYVA VRRSRDALWA LTFFIILVLV LFSTLIYFAE RGTWDPSLSA FIDSDGDPSA FDSIPRTAWF SLVTMSTVGY GEVVPKSFLG KLLTIPLLMF GLLLIALPSF VLGRNFAIVF DAMTRQLPKN VSSRMPTPRE SIEQTRTAQA STDNIPLLPV SSQNTQTATP NGPSLSRPRS ASPFPASGTV DQRAAFGNAP RMWQGGIDGT GETKRERDLT NTKLAKNQLV LFEQIDALRQ TIDKQGEMLA RLTEMLNVKD KGKGPEKSKG LQEDHFALGD SGEE
|
| |