Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNN01880 |
Symbol | |
ID | 3255434 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006683 |
Strand | + |
Start bp | 543078 |
End bp | 545541 |
Gene Length | 2464 bp |
Protein Length | 666 aa |
Translation table | |
GC content | 50% |
IMG OID | 638254606 |
Product | nucleolar GTP-binding protein 1, putative |
Protein accession | XP_568664 |
Protein GI | 58262508 |
COG category | [R] General function prediction only |
COG ID | [COG1084] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATCGTCTTCT CACTCAGCAC ACGTCCCCTA TCTCGTTTGA CGCTGGCCAC CCTACTTAAC AGCAATCATG TCTTCCGTCG CAGGTCTTCA GCGCATCACG CCGGTGCCCA CATCGGCCGA CTTTATCGAT GTCGTCCTCA ACGCAACCAT GAGGAAGACC CCCACTGTCA TCCACAAGAA CGTAGGTCGA CTTTTGCTCG AAAGGCGCAA ACTGACAATT GACGATGAAA ATTAGTTCAA AATCTCTCGT ATTAGGAACT GTACGTCTCG GTAGCCGTAA TCACAGTTTT AGTGCAAGGC TGACATCGTT ACAGTCTACA TGCGAAAGGT CAAGTTCACC CAGGATACCT TCGATGAGAA ACTTGGCAAG ATCATCTCCG AGTTCCCCGT GCTCGACAAC CTTCACCCTT TCCTCTCTTC TCTCCTCAAC GTTCTGTACG ACAAGAACCA TTACAAACTC GCCTTGGGTC AAATCAACAC TGCTCGACAC CTCATCTCTC AAGTTGCCAA GGATTACGTC CGTCTCCTCA AGTTTGGTGA CTCCCTCTAC CGATGTAAGC AGTTGAAGAA GGCCGCTTTG GGTAGAATGG CGACTATAAT GAGGAGGCAG AAGGACCCCT TGGCGTACTT GGAGCAGGTT AGGCAGCACA TTTCTAGGTT GCCTGCTATC GATCCCAACA CCAGGACTCT CTTGATCTGC GGTTATCCCA ACGTTGGAAA GTCCAGTTTC GTCAACAAGG TCACCAGAGC CGATGTAGAT GTTCAACCTG TAAGTTTTTC TCATGATTCG CGGAATGACC TCCTGCTGAC AGCCTCGGCG TAGTACGCTT TCACCACCAA ATCCTTGTTC GTCGGTCATA TGGACTACAA GTACCTCCGA TGGCAAGTCA TTGATACCCC TGGTGTTCTT GACCACCCTC TCGAGGAGAT GAACACCATT GAAATGCAAT CCATCACTGC TCTTGCGCAC CTGCGAAGTG CTGTCCTCTA TTTCATGGAC CTTTCCGAAC AGTGTGGTTA CACTATTGAG GCTCAGGTAT GTTTGGGTTT TTTCCGTACG CCATAGCATA CTTATTCTTT TGCAGTGCAA GCTCTTCCAG TCTATCAAAC CCCTTTTCCA GAATAAGCCC ACCATCCTCG TCATTAACAA GATCGACATC GTCCGACTTG CCGACCTCTC TGAGGAAAAC CGATCTTATG TCGACACTAT TCTTGCCGAC AAGAGCGTCA CCGTTGTTGA AGCCTCTACT TACACCGAAG AAGGTATTAT GAACGTCCGA AACACTGCCT GTGATGCTCT TCTCGCCCAT CGAGTCGAGC AGAAGCTCCA GGGTTCTAGG ATTGAAATGG TCGCCAATAA GATCCACGTC GCTATTCCTC AAAAGCGAGA TGATGTTGAG CGAAAGCCCT TTATCCCCGA TACCGTTGCC CACAAAGTCA AGTACGACAA GGACGACCCC AGCAGGCCCA AGACTGAGAG GGATATGGAG CAAGAGTTGG ACCATTCTGG CATGGGTGTC TACTCTGTCG ACATGAAGAG TGAGTGTGAT GTCTTTACTT CAATATGTTT ATATGTACTG ACCCAATTTT GCAGAGAGCT ACATGCTCGC AGACGACTCC TGGAAATACG ATGTTATCCC CGAATTCCTC AATGGCAAGA ACGTCGCCGA CTTTATCGAC CCCGATATTC TCGAGAAGCT CGACGCTCTT GAGCGCGAGG AGGAGGCCCT TGAGGCCCAA GGGTTCTACG CTTCTGACGA GGAGGAAATG GTGAGTAATC CATCTGGAAT TTAGTCAGCT ACTATGACTA ACTCTCTTTC TCAGCTTGAC TCTGAGGAGG AAGAGTTCCG TGATGCTGCC CGACAAATCC GAGCCAAGAA GGCAGCTATC AAGAAGATAT CTCAGGAGAA AAACACTCTT CAAAACCGTC CCATCATCCC CAAGAACAAG AAGAAGCTCT ATCTCAGCGA CCTCACTTCC AACATGCGTA AAGCTGGTCA CGATCCTCGC GAGCTCGAGA AGCGAGCGGC CAGGTTGGCC AAGGAGAATG ACAAAATTAA CGCTGAGAGG AAGAAGGCTA TGGCCGCTCA GCAGGCTGCT GAGGAGGAGG CTGGTGGTAT GGACGTTGAC ATGGATGAGG GTGACGGGTC TTCCAAAAAC AAGAAGCGTG GTGTTGCCGC TGCTGACCGT GCGCCTCGTA CAAAGCGACA GTACGCCGGT TTGGCTACCA ACCAACAATC AGAAAAGGCC AACGAGCTCC GTATGTTTGC TCAGCGTCTG CCTAATAGGT TGGCCAAGGC CTCTGAAAGT GACAGACACG TGCCCATCAC TAGGCCGAAG TGGATGTTGT CTGGTAAGAG AAAGGGTGGT ACGACTGACA GGCGATAGAT GCACGTTGTT AAAAGATGGG CTAGGGAAGT TTGGGCTTGT TTTCTTTGAT TTTGTATGTA CTATGATTAG ATAT
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Protein sequence | MSSVAGLQRI TPVPTSADFI DVVLNATMRK TPTVIHKNFK ISRIRNFYMR KVKFTQDTFD EKLGKIISEF PVLDNLHPFL SSLLNVLYDK NHYKLALGQI NTARHLISQV AKDYVRLLKF GDSLYRCKQL KKAALGRMAT IMRRQKDPLA YLEQVRQHIS RLPAIDPNTR TLLICGYPNV GKSSFVNKVT RADVDVQPYA FTTKSLFVGH MDYKYLRWQV IDTPGVLDHP LEEMNTIEMQ SITALAHLRS AVLYFMDLSE QCGYTIEAQC KLFQSIKPLF QNKPTILVIN KIDIVRLADL SEENRSYVDT ILADKSVTVV EASTYTEEGI MNVRNTACDA LLAHRVEQKL QGSRIEMVAN KIHVAIPQKR DDVERKPFIP DTVAHKVKYD KDDPSRPKTE RDMEQELDHS GMGVYSVDMK KSYMLADDSW KYDVIPEFLN GKNVADFIDP DILEKLDALE REEEALEAQG FYASDEEEML DSEEEEFRDA ARQIRAKKAA IKKISQEKNT LQNRPIIPKN KKKLYLSDLT SNMRKAGHDP RELEKRAARL AKENDKINAE RKKAMAAQQA AEEEAGGMDV DMDEGDGSSK NKKRGVAAAD RAPRTKRQYA GLATNQQSEK ANELRMFAQR LPNRLAKASE SDRHVPITRP KWMLSGKRKG GTTDRR
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