Gene CNN01880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNN01880 
Symbol 
ID3255434 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006683 
Strand
Start bp543078 
End bp545541 
Gene Length2464 bp 
Protein Length666 aa 
Translation table 
GC content50% 
IMG OID638254606 
Productnucleolar GTP-binding protein 1, putative 
Protein accessionXP_568664 
Protein GI58262508 
COG category[R] General function prediction only 
COG ID[COG1084] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATCGTCTTCT CACTCAGCAC ACGTCCCCTA TCTCGTTTGA CGCTGGCCAC CCTACTTAAC 
AGCAATCATG TCTTCCGTCG CAGGTCTTCA GCGCATCACG CCGGTGCCCA CATCGGCCGA
CTTTATCGAT GTCGTCCTCA ACGCAACCAT GAGGAAGACC CCCACTGTCA TCCACAAGAA
CGTAGGTCGA CTTTTGCTCG AAAGGCGCAA ACTGACAATT GACGATGAAA ATTAGTTCAA
AATCTCTCGT ATTAGGAACT GTACGTCTCG GTAGCCGTAA TCACAGTTTT AGTGCAAGGC
TGACATCGTT ACAGTCTACA TGCGAAAGGT CAAGTTCACC CAGGATACCT TCGATGAGAA
ACTTGGCAAG ATCATCTCCG AGTTCCCCGT GCTCGACAAC CTTCACCCTT TCCTCTCTTC
TCTCCTCAAC GTTCTGTACG ACAAGAACCA TTACAAACTC GCCTTGGGTC AAATCAACAC
TGCTCGACAC CTCATCTCTC AAGTTGCCAA GGATTACGTC CGTCTCCTCA AGTTTGGTGA
CTCCCTCTAC CGATGTAAGC AGTTGAAGAA GGCCGCTTTG GGTAGAATGG CGACTATAAT
GAGGAGGCAG AAGGACCCCT TGGCGTACTT GGAGCAGGTT AGGCAGCACA TTTCTAGGTT
GCCTGCTATC GATCCCAACA CCAGGACTCT CTTGATCTGC GGTTATCCCA ACGTTGGAAA
GTCCAGTTTC GTCAACAAGG TCACCAGAGC CGATGTAGAT GTTCAACCTG TAAGTTTTTC
TCATGATTCG CGGAATGACC TCCTGCTGAC AGCCTCGGCG TAGTACGCTT TCACCACCAA
ATCCTTGTTC GTCGGTCATA TGGACTACAA GTACCTCCGA TGGCAAGTCA TTGATACCCC
TGGTGTTCTT GACCACCCTC TCGAGGAGAT GAACACCATT GAAATGCAAT CCATCACTGC
TCTTGCGCAC CTGCGAAGTG CTGTCCTCTA TTTCATGGAC CTTTCCGAAC AGTGTGGTTA
CACTATTGAG GCTCAGGTAT GTTTGGGTTT TTTCCGTACG CCATAGCATA CTTATTCTTT
TGCAGTGCAA GCTCTTCCAG TCTATCAAAC CCCTTTTCCA GAATAAGCCC ACCATCCTCG
TCATTAACAA GATCGACATC GTCCGACTTG CCGACCTCTC TGAGGAAAAC CGATCTTATG
TCGACACTAT TCTTGCCGAC AAGAGCGTCA CCGTTGTTGA AGCCTCTACT TACACCGAAG
AAGGTATTAT GAACGTCCGA AACACTGCCT GTGATGCTCT TCTCGCCCAT CGAGTCGAGC
AGAAGCTCCA GGGTTCTAGG ATTGAAATGG TCGCCAATAA GATCCACGTC GCTATTCCTC
AAAAGCGAGA TGATGTTGAG CGAAAGCCCT TTATCCCCGA TACCGTTGCC CACAAAGTCA
AGTACGACAA GGACGACCCC AGCAGGCCCA AGACTGAGAG GGATATGGAG CAAGAGTTGG
ACCATTCTGG CATGGGTGTC TACTCTGTCG ACATGAAGAG TGAGTGTGAT GTCTTTACTT
CAATATGTTT ATATGTACTG ACCCAATTTT GCAGAGAGCT ACATGCTCGC AGACGACTCC
TGGAAATACG ATGTTATCCC CGAATTCCTC AATGGCAAGA ACGTCGCCGA CTTTATCGAC
CCCGATATTC TCGAGAAGCT CGACGCTCTT GAGCGCGAGG AGGAGGCCCT TGAGGCCCAA
GGGTTCTACG CTTCTGACGA GGAGGAAATG GTGAGTAATC CATCTGGAAT TTAGTCAGCT
ACTATGACTA ACTCTCTTTC TCAGCTTGAC TCTGAGGAGG AAGAGTTCCG TGATGCTGCC
CGACAAATCC GAGCCAAGAA GGCAGCTATC AAGAAGATAT CTCAGGAGAA AAACACTCTT
CAAAACCGTC CCATCATCCC CAAGAACAAG AAGAAGCTCT ATCTCAGCGA CCTCACTTCC
AACATGCGTA AAGCTGGTCA CGATCCTCGC GAGCTCGAGA AGCGAGCGGC CAGGTTGGCC
AAGGAGAATG ACAAAATTAA CGCTGAGAGG AAGAAGGCTA TGGCCGCTCA GCAGGCTGCT
GAGGAGGAGG CTGGTGGTAT GGACGTTGAC ATGGATGAGG GTGACGGGTC TTCCAAAAAC
AAGAAGCGTG GTGTTGCCGC TGCTGACCGT GCGCCTCGTA CAAAGCGACA GTACGCCGGT
TTGGCTACCA ACCAACAATC AGAAAAGGCC AACGAGCTCC GTATGTTTGC TCAGCGTCTG
CCTAATAGGT TGGCCAAGGC CTCTGAAAGT GACAGACACG TGCCCATCAC TAGGCCGAAG
TGGATGTTGT CTGGTAAGAG AAAGGGTGGT ACGACTGACA GGCGATAGAT GCACGTTGTT
AAAAGATGGG CTAGGGAAGT TTGGGCTTGT TTTCTTTGAT TTTGTATGTA CTATGATTAG
ATAT
 
Protein sequence
MSSVAGLQRI TPVPTSADFI DVVLNATMRK TPTVIHKNFK ISRIRNFYMR KVKFTQDTFD 
EKLGKIISEF PVLDNLHPFL SSLLNVLYDK NHYKLALGQI NTARHLISQV AKDYVRLLKF
GDSLYRCKQL KKAALGRMAT IMRRQKDPLA YLEQVRQHIS RLPAIDPNTR TLLICGYPNV
GKSSFVNKVT RADVDVQPYA FTTKSLFVGH MDYKYLRWQV IDTPGVLDHP LEEMNTIEMQ
SITALAHLRS AVLYFMDLSE QCGYTIEAQC KLFQSIKPLF QNKPTILVIN KIDIVRLADL
SEENRSYVDT ILADKSVTVV EASTYTEEGI MNVRNTACDA LLAHRVEQKL QGSRIEMVAN
KIHVAIPQKR DDVERKPFIP DTVAHKVKYD KDDPSRPKTE RDMEQELDHS GMGVYSVDMK
KSYMLADDSW KYDVIPEFLN GKNVADFIDP DILEKLDALE REEEALEAQG FYASDEEEML
DSEEEEFRDA ARQIRAKKAA IKKISQEKNT LQNRPIIPKN KKKLYLSDLT SNMRKAGHDP
RELEKRAARL AKENDKINAE RKKAMAAQQA AEEEAGGMDV DMDEGDGSSK NKKRGVAAAD
RAPRTKRQYA GLATNQQSEK ANELRMFAQR LPNRLAKASE SDRHVPITRP KWMLSGKRKG
GTTDRR