| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNN01140 |
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| Symbol | |
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| ID | 3255508 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006683 |
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| Strand | + |
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| Start bp | 347649 |
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| End bp | 351071 |
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| Gene Length | 3423 bp |
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| Protein Length | 775 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 638254530 |
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| Product | ubiquitin-protein ligase, putative |
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| Protein accession | XP_568555 |
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| Protein GI | 58262290 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5647] Cullin, a subunit of E3 ubiquitin ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CATTCCCACG TCGACTCCCC TGCCATCTGC TCTAGAATCT CCGATACGCC AGAATATGTC
CGCATCGGCT TCCGGATCAT CTTGGACAGA GCCCACAAAG GCTCAGGCTC CTCCTAAGTA
CGTCTTGTGA TGGACTTCCG GCCCTTTATG CCCTAGCTGC CGCTACATTC CTATATTTTA
GAGTGGCCAG TGATGAAATG CGAAGGCCAA GAGCTAACAC CATCCATCTT TAGAGATGCG
GACTTGAAAC AAGCTTGGGC TTTCCTTTCT GTCGGTGTTG ACCACATTAT GACCAGGTGA
GTCAGCTGCT GCTTTAACAT CCGTCTCTCA TCTGAAATGC CAAGTGCTAA CCCAAAATAG
GCTTAGCTTT GGAATGTCTT ACTCTTACTA CATCCTCCTA TATACCGCCA TCTACAACTA
CTGTACTCAG CCAGGCAAGA CTGGTCTCCC TTCATTTTCA CCCCAACGGG GCGGAGCTAG
TCTTCAAGGC GCCGACCTCC ACAGAAGCTT GCACAATTGG TTATCTGCTC ACTGCAAGTC
CATGCGAGAG GTTCGTGGAT TGTTTATGTC ATAAAGGTTT GGTATCAAAA GGCTGATAAC
AATTTATCTG CCCTTACGCA GGAGGCCGAG AAACTTCCTG ACCAAGAACT TCTCAAGTAT
TATGCTCGTC AATGGGACAG GTACACCCGA GGCGCCTTGT ACGTCAACAA GCTTTTCAAC
TATTTGAACA AGCACTGGGT CAAGCGAGAG AAGGACGAGG GTCGAAAGGA CGTTTATCAA
GTGTACACTG TGTGTAATTT TTCCTCGCTC TTCCGCCACT TTGCTGACAG GGCAATCTAA
TTGTTCAGCT TGCATTGGTA TCTTGGAAGA ATAACTTCTT CGATCATTTC ACTGACAATA
AGGGGACCAG CCGATTAACT CAAGCTTTGT TACGGCAGAT CCAGCAGCAA CGTAACGGCG
AGGAAGTCGA TTCTGGTCTT CTCAAGAAGG TCATCGACAG TTATGGCAAG TGTTTCTTGT
CGCTATAAGA GATGGTTTGG CTGATGTGAA AATCTAGTCT CCCTTGGTCT TGACGAGGCC
GATGCTCAAC GACAAAATCT GGATACCTAT AGGAAACATT TCCAGACTCA ATTCCTCGAA
GCCACCGACA CCTACTACCG TGCTGAATCT TCTGCATTTG TTGGTTCCAA CTCTGTTGCG
GACTATATGA AGAAGGCAGA GGCGAGGTTA CAGGAGGAGG CGGACAGGGT GAACTTGTAT
TTGCATGATA ATACTAGGAA CGATGTGAGT ACTCTTGATG GGGCGCACTT TTCGGTGCTG
ACTTCTCTGT AGTTGAAGAC AAGATGTGAA AAGGTACTCA TTGAAGAGCA CCAAGCCATT
ATGTGGGATG AGTTCCAAAC TCTTCTTGAT AGCGACCGGG TTGACGGTAA GTTATATATA
TATATATATA TAACAAACTG GTACTGATGC AAATTTTAGA CTTGGCAAGG ATGTACGGAC
TTCTTTCTCG CGTGCTCAAC GGGCTTGACC CTTTACGAGA AAAGTTTGGT CAACACGTCA
GGCGTGCTGG TAGAGCAGCT GTGGAAAAGG TCCTTCCTGC CCCAGGAGCT GTCAATGAAG
CTGGAAAGGC TGAGTCTCTC GTAAGTCCGC CTCAATTGTG AAATATAGAC ATCATTAACT
GTTTGCCTAG GATCCTAAGG CGTACGTTGA GGCCCTTCTC GAAGTACACG GCAAGTATAC
CTCCATGGTT GAAGGGCCCT TCCGAGGCGA AATGGGTTTC AACCGTGCTC TCGATCAGGC
CTGTGGCGAC TTCTGCAACT CCAATGCTGC TTGTACTGTC TCTACAAAGT CTCCCGAGTT
GTTGGCTAGC TACTGTGATT TATTGTTAAG AAAAAGCAAT AAGGACTCTG ATGCTGAATC
TTTGGAAGCT TCTTTGAGCA AAGCTGTGAG TTTGCTTTGA TTTTGTTGTT CGCCTTTGCT
AATGGACATC GTCGTAGATG ATCATTTTCA ACTTCATCGA CGACAAGGAT GTCTTCCACA
AGTTCTATCA GAAGAAGCTC GCTCAGCGAC TTGTCGGTTC TCTTTCCGCG TCAGACGATG
CAGAGAGCAG CATGATCACC AAGCTCAAGG AGTTATCTGG TTTCGAATAC ACCAACAAGT
TGTCTAAAAT GTTTACCGGT GAGTCTGTCT TTGTGTTGTA TCGAGACTTT GTACTGATCA
GGAACAGATG TCAATCTTAG TAAAGACTTG ATGGAACGAT TCAACGAAAG GGAGAGAGAG
AAGGGCATAG CCTCCGATAG TGAGTTTTGG TACGAAAGGT AGGTCAGGCG CACTAACTCC
ATTCAACAGT CGATTTCCAA CCCTTGGTCC TTGGTTCTAA CAGTTGGCCT TTGCACCCTC
AACAAACCGA CTTTGCCATT CCTCGCGAAA TCCAGGCCCT CTATGATCGG TTCAACGCCT
TCCACGGCGA AGTTCATCAG TACGTTAGTC TCGATTTCTC TCGTCACACG GCATCCTGAC
ATACTATGTA GAGGCCGAAC TCTCAACTGG TTATGGCACA TATCCAAGAA CGAACTCCGC
ACCACCTACC TCAACCAAAA GTACATTTTG ATGACCTCCG CCTACCAAAT GGCTATCCTC
ACACAATTCA ACGTTTCCGA CACCCTTTCT TACAAGGATA TTGAGGCCGG TACCAAGCTT
TCCCCCACTG TGCTCAAGCC CCAGCTCGGC TTACTCGTCA AACTGAAGAT TCTCTTGAAC
ACTAATGAAG AATATTCTTT GAATACGGGC TTCAAGAGCA AGAAGATTAG GGTCAATTTG
AACCAGACTA TCAAGTCTGA GGCTAGGGCT GAGCAGAAGG AGGTTATCGC TGCTGTTGAT
GAGGACAGAA AGTTTGTTTA CCAGGCGACT ATTGTAAGGT TGATGAAGGG GCGAAAGGTA
TGTTTCTAGT CGAGGTCTAC TTTTGTGAAT ACTGACAGTT TCCATTTAGA CTATGCAACA
TCAAGCTCTT ATTCAAGAAG TCACCGCTCA GATCTCCTCC AAGTTCACTC CTAAAATTCC
AGAGATCAAG AAAGCGATTG AATACTTGAT CGACAAGGAG TACCTGGAGC GAGCTCCCGA
TTCCAATAAC ACTTAGTACG CCCTGATGAT CTCTTGTCCG AAGGATTAGC GCTTATATTC
CCGATAGCAA CTACTTGGCC TAAGTGTGTT CTCTGATTTG GTTCATAAAG AGCAGGTAAA
TGAGCGATAG GACGAGATTG TAGCATGGGA AATGTCATCT GGTGGATACC CGAGACGAAG
CACAGGTGGA TGCCGAATAC AGGGCAAAAG GCTGAGGGTA TGTAGAATTA ATAGCCCATG
GCACTAGTCT CATTATAGCA TTTTTTCTAC CTTGTAAACA TGTCAGTATA TCGTCTATTA
AGC
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| Protein sequence | MSASASGSSW TEPTKAQAPP KDADLKQAWA FLSVGVDHIM TRLSFGMSYS YYILLYTAIY
NYCTQPGKTG LPSFSPQRGG ASLQGADLHR SLHNWLSAHC KSMREEAEKL PDQELLKYYA
RQWDRYTRGA LYVNKLFNYL NKHWVKREKD EGRKDVYQVY TLALVSWKNN FFDHFTDNKG
TSRLTQALLR QIQQQRNGEE VDSGLLKKVI DSYVSLGLDE ADAQRQNLDT YRKHFQTQFL
EATDTYYRAE SSAFVGSNSV ADYMKKAEAR LQEEADRVNL YLHDNTRNDL KTRCEKVLIE
EHQAIMWDEF QTLLDSDRVD DLARMYGLLS RVLNGLDPLR EKFGQHVRRA GRAAVEKVLP
APGAVNEAGK AESLDPKAYV EALLEVHGKY TSMVEGPFRG EMGFNRALDQ ACGDFCNSNA
ACTVSTKSPE LLASYCDLLL RKSNKDSDAE SLEASLSKAM IIFNFIDDKD VFHKFYQKKL
AQRLVGSLSA SDDAESSMIT KLKELSGFEY TNKLSKMFTD VNLSKDLMER FNEREREKGI
ASDIDFQPLV LGSNSWPLHP QQTDFAIPRE IQALYDRFNA FHGEVHQGRT LNWLWHISKN
ELRTTYLNQK YILMTSAYQM AILTQFNVSD TLSYKDIEAG TKLSPTVLKP QLGLLVKLKI
LLNTNEEYSL NTGFKSKKIR VNLNQTIKSE ARAEQKEVIA AVDEDRKFVY QATIVRLMKG
RKTMQHQALI QEVTAQISSK FTPKIPEIKK AIEYLIDKEY LERAPDSNNT YNYLA
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