Gene CNN00820 details

Gene Information

• Locus tag: CNN00820
• ID: 3255510
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006683
• Strand: +
• Start bp: 264612
• End bp: 266723
• Gene Length: 2112 bp
• Protein Length: 560 aa
• GC content: 49%
• IMG OID: 638254498
• Product: pseudouridylate synthase, putative
• Protein accession: XP_568627
• Protein GI: 58262434
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0101] Pseudouridylate synthase
• TIGRFAM ID: [TIGR00071] pseudouridylate synthase I

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCCAC GCGTAACAGC ATTTCTTAGC AATATACTCA GGCAGCCAGC TTTAAAACGC 
ATAATGGAAC ACACAGAACC CATGAAGAGG CCCAGATCGC CATCTCCGCA GCAGGCAATG 
GTACCAGAGG CCAAAAGACC CCATATCGAA CCGGCACCGG TACCTGCTGC AGTCCAAGTT 
GATGCCGAAG AAGCAATGTT CAATGTCGAA GAAGAAACTC AAGGTGGCAA AGGACGGAGA 
GGGAAGAGAG GAAATGAAGG CCAGGCTCGT AAAGAGAAGA AAGAGAAACG AGATGCCAAG 
GACCCGAGGG CTCAACGAGC TTGGGAACCC AGCGAGAAGA CCAATGGCGA AAAACGGTTG 
CCCAAGAGGA GGTGCGCTGT GTTGATTGGG TGGGTCTTGC AACGTTCTGG GCGTGGTAGC 
AGCTTTATGA CTAATGCGAA TACAGCTACT GCGGTACTGG ATACCAGGGT ATGCAAATGT 
GCGCTTTTTT CATTGTCTCT GGCCGCTCAT TTGCCAATCC TTACATTATT GTAGACAAGA 
CCACACTGAC CGAACTATTG AGGGCGAAGT CTTTGCTGCT CTTGTCAAAG CTGGCGCTGT 
CTCTGCCGAC AATGCTATCG ATGCGCGCAA GGTCGACATT GCTCGAGCTG CTCGAACGGA 
TGCTGGCGTT CACGCCGCCG GTAATGTTAT CTCCATCAAA ATGATCACAG AACCGCCTCT 
TCCCGAAGGC TTCAAAGATG TCGCCGAGTA TGTCAACACT TTCTTACCAG ACCAAATTAG 
GATGTGGGGC TGGGTCAGAA CCGTCAAGTC CTTCAACGCC CGAACGTGAG TCTTCGCTAC 
CTGTGACTGT ACCATGGATT ACGGCTGATG ATGGCCCTGG TAAAGGGCGG CCGACTCTCG 
TATATACGAG TACCTCCTTC CGTCATACTG CCTCATACCT CCCCACAAAG ATGACTCTCT 
TGCCAAGCAT CTCGATTTAT CCTCTCCCGA CTGGCGAGAA ATCGTCGGTG AGGGTCCTTG 
CTCCTTTGCC GACGCTAGAC TCCCTATGCC CACTTCTGAC GAAGGCGAAG TCGACCCCAA 
GGTTCGAGGA GAGTACGAGA GAAAAAGAAA GTGGAGAGTG GATGAAAAGA CTTTGGGCCG 
GTTCAGAGAC ATCATTGCCC AGTACAAGGG TACTCAGTGA GTGTTCGTGT AGAACAGATA 
CAACTGGCCA GAACTGAGGG AATGTCAGCA ACTTCTACAA CTACACTGTT GGCAAGCCTT 
TTAATGACCG AGCAGTCAAG AGGTTTATGA TCAAGCTTGA GGTGAAGGAA CCCAAGGTGT 
ATGGAGAGAT TGAATGGATT TCCGTTCAAA TCCACGGACA AAGTTTCATG CTTCATCAAA 
TCGTAAGTGT ACTATATTTA TACCAGTAGA CATTATCAGC TCATGGTGCC ACAGCGAAAA 
ATGATCTCCA TGGCGATGCT CGCCTGCCGA ACTGGTTCTC CTCCCTCTCT CCTCCCCGAG 
ACATTTGGTC CCAAGAAAAT TCACATTCCC AAAGCCCCCC CTCTCGGTCT CTTGCTCGAG 
GCTCCTCAGT TTGGCGTTTA CAACGACAGG ATCACCCAGA AGTTGAATGG CATCACCGAA 
GACAGGGATC CGGTAAACTT TGGTCTGTAT GCGGATGAGA TCTATGCTTT CAAGGTGAAG 
TGGATCTATG AAATGCTGAG GAAGGAGGAG TTAGAGAAGA ACGTGTGAGC CAAAAGCTTG 
CATGGTATGA CTGTTTCAAT GCTGATGAAT GGATAGTTTC CACAAGTGGA TCCAAATGAT 
GGACAACATC AAGAACGATT CTCTCGGTTA CCTCAAGTAT GTCACTTCAT CCATCTTCGC 
CGCAGTGATT CATGCTGACA TTCAATTTAG CACTAAGGGC ATTATCCCGG CAGAAGCCAC 
TGCCTTGGTA CTTGAGCAGG AGAGCAAGCG AAAGGAGGGT CAAAAGACTC AGAAGGAAGG 
TGTTGAAACC GGAGTCGAGG AGATTGAGAG TGATGACGAG GAGGTTGACC AAGAGGCCTT 
GAAGAGGGGT GAATTGGAAG GGTAGTTCAC CGCTGTAAGA TAAGCAATTA CATTATACTC 
ATGTATGCAT AT 

 

Protein sequence

MIPRVTAFLS NILRQPALKR IMEHTEPMKR PRSPSPQQAM VPEAKRPHIE PAPVPAAVQV 
DAEEAMFNVE EETQGGKGRR GKRGNEGQAR KEKKEKRDAK DPRAQRAWEP SEKTNGEKRL 
PKRRCAVLIG YCGTGYQGMQ IQDHTDRTIE GEVFAALVKA GAVSADNAID ARKVDIARAA 
RTDAGVHAAG NVISIKMITE PPLPEGFKDV AEYVNTFLPD QIRMWGWVRT VKSFNARTAA 
DSRIYEYLLP SYCLIPPHKD DSLAKHLDLS SPDWREIVGE GPCSFADARL PMPTSDEGEV 
DPKVRGEYER KRKWRVDEKT LGRFRDIIAQ YKGTHNFYNY TVGKPFNDRA VKRFMIKLEV 
KEPKVYGEIE WISVQIHGQS FMLHQIRKMI SMAMLACRTG SPPSLLPETF GPKKIHIPKA 
PPLGLLLEAP QFGVYNDRIT QKLNGITEDR DPVNFGLYAD EIYAFKVKWI YEMLRKEELE 
KNVFHKWIQM MDNIKNDSLG YLNTKGIIPA EATALVLEQE SKRKEGQKTQ KEGVETGVEE 
IESDDEEVDQ EALKRGELEG