Gene CNN00480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNN00480 
Symbol 
ID3255515 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006683 
Strand
Start bp160485 
End bp162074 
Gene Length1590 bp 
Protein Length486 aa 
Translation table 
GC content53% 
IMG OID638254464 
Productchromosome organization and biogenesis -related protein, putative 
Protein accessionXP_568580 
Protein GI58262340 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAAGATGTCG ATCGACCCAG CTGGATCACA GGCATCTCGC CAACTCCCCA TCAACCTCTT 
CACCAGGTCT CCAACAGATG CCATCCCCCA GTCTACCTAT TTTATTCCCT CCGCCTGGCG
TCGATTCCAA CTCTCAGAAC TCATAAACCA GGTTCTCGGT AACACCGCTG AAAATGGAAG
TAAACCTGTG CCATTTGACT TCCTTGTAAA CGGTGAAGTT CTTAGGGGCA GCCTAGAAGC
GTGGGTGAAA AAGAACAGGG GAGGAGATGA AGAAAGTCAG ATTGATGTTG AGTATGTGAG
GAGTGTGATG CCGCCAGAGG AGGCTGCGAG GGTCGAGGTC GAGGATTGGG TGTCTGGCTT
GAGCTTAAGC AGGAAAGGGT ACGTTCAAAT GATGCAGAAA AGATTTATTT GCTGACATCC
TCACAGATAC GTGCTTCTTT CATCCTACCT ATCTCACCTG CAAGTCCTCC CTCTTTCAGC
TGCTGCTCAA TCATCCTCTG CTCTTTACAC TCTTCCCCTC CCTACTTCCC TTGGTGCTAC
ATCCTGTACC TGGGTTTCTC CTCAAACTCA AGAAACCGAC ATTCTCGTCG CTGCCGGCGG
TGTTGACCGT CAAACCCACG TTTACTCTAT TCCCTCCCTC TCACCCGACA CTGCTGATGC
TCCTCGCGAA CTCTACACCC TTCACGGCCA CACCGGTCCT ATCTCTTCTG TTATCGCTAG
CTCCTCCGGT AAAGAAATTG TAACAGGTTC ATGGGACGGT AACATCAATC TCTACGTCCT
TCCCGACGCG GAGCCAACAG AACACCAAGT TCCTGCCGAC CCCGTGTCTT ATCTCCCTGG
CCAAGGTACC AAGAAGCGTC GGAAGCTCGA GAAAGACCAA GAAAAGGCTC CTATAGAAGG
TCTCACTGAC GGTGATGCTA CCGGCGAAGG TGGATGGAGG CGGGCGCCTG ATGCTGTCAT
GCGTGGCCAT ACCGGCAGGG TCGGCGGCCT CGTTTGGGAC AAGCTTGACA GTGGTAAGAT
CTGGAGTGCT GGCTGGGACG GAAGCGTGCG TGGATGGGAG GTGGAGACTG GTGCTGCCGG
AGCGTTGAGG CAGGGACCGT TTGATAAGTC TGCGCTGTGT GTGGATCAGT GGAAGATGAA
TGGAACTTTG GCGACCGGTA ATATGGACAG GACGATTTGT CTTTGGGATA CTCGACAAGG
TCAGTCACTG TCGTCTCATC CATCACTAGC TACACATCTA ACTCATTTTT TTTCCTTAGC
TACCTCCCTG ATTTCCCTTA CGCTTCCCAC CACGTCCCCC GTCCCCTCTG TTACATGCCA
CCCTACATCC CCCTTCACCC TCGCCTCTGC CACTTACTCT GGCGTCGTCC AAATCTGGGA
TATCCGATCA CCCAAGACTG CCCTTTTCAC CGTTTCAAAG GCGCAGAGCA AGTTGGCCGA
TCCTAATAGA AAGGTTACAA AGAATGGCAA GGTTTTGGGT GAGAGGCTGT TGGCGGTTGA
CTGGAATGGA GAAGTTTTGG TTGCGGGTGG TGAAGACGGC GAGGTTGGGA TCTGGCGAGC
GAGAGGAGAG TAAAATCACG GGATATCGAG
 
Protein sequence
MSIDPAGSQA SRQLPINLFT RSPTDAIPQS TYFIPSAWRR FQLSELINQV LGNTAENGSK 
PVPFDFLVNG EVLRGSLEAW VKKNRGGDEE SQIDVEYVRS VMPPEEAARV EVEDWVSGLS
LSRKGYVLLS SYLSHLQVLP LSAAAQSSSA LYTLPLPTSL GATSCTWVSP QTQETDILVA
AGGVDRQTHV YSIPSLSPDT ADAPRELYTL HGHTGPISSV IASSSGKEIV TGSWDGNINL
YVLPDAEPTE HQVPADPVSY LPGQGTKKRR KLEKDQEKAP IEGLTDGDAT GEGGWRRAPD
AVMRGHTGRV GGLVWDKLDS GKIWSAGWDG SVRGWEVETG AAGALRQGPF DKSALCVDQW
KMNGTLATGN MDRTICLWDT RQATSLISLT LPTTSPVPSV TCHPTSPFTL ASATYSGVVQ
IWDIRSPKTA LFTVSKAQSK LADPNRKVTK NGKVLGERLL AVDWNGEVLV AGGEDGEVGI
WRARGE