Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNM01580 |
Symbol | |
ID | 3255090 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006682 |
Strand | + |
Start bp | 457691 |
End bp | 461536 |
Gene Length | 3846 bp |
Protein Length | 910 aa |
Translation table | |
GC content | 48% |
IMG OID | 638254311 |
Product | expressed protein |
Protein accession | XP_568332 |
Protein GI | 58261844 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.979482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CCCTCCACAA AAACATCACA TTCACTGACA AACACCCTTC GCCGCCATGG ACTACTCACA GATTGATCCA CAGTTGAGGT CACTAGATGC CCAATCCCCC GACAATGACT CGGTGTCGGG AACGAGCAAC ACTCCTCCGA GAGTTCTTGC GCGGAATTCT GCTTGTCATC AATGCCGGTT AGTCATATCG GGAGCAGTTC GCCATCAGAA CAGTCACTTA TGATTCGATT TACAGTAAAC GAAAACTTGT AATGTCGCTC GTACATCATA ATCCATACCT TCTGACTATC TACAGAAATG TGATGCCCAG AAACCTATCT GTGGTAACTG CGCCAAACCT AGAGCTCGCG GAAAATCCGG AGATGAGCAG CCACATGAAG ACTGTACCTG GGATGAGCCC AAAGAACCTA GTGCGAGGAC AAAACGAAGG AGGGAACTCG CAAAGAGACA GGCTATGGAA AGCGGCCACA CAGATGGGAA GGAATCTGGG GAAAAGACGA AAAGGGCAAG GCTGAATGAG CTTGAAGGAC GAATTGGTAG GCTGCCCACT GGTCGATGGA AGACGCGCAT CTGACATTAA CAATTTGCAG CTGCGTTTGA GGGAGCCATG GAATCCCAAC ACTACCCTAC GACAACTAAC CCAACCCCTG TTCAGACGTT ACAAGAAGCC ATGCCCTATG CTCAACAAAC AGAGTCTAAT CCCTACGCCG CCAACGGTCC GTACGATTAC CATCGTCCTC CTTTTTCAGC CGGTCCCTTG AGTGACTTCA CTTTTGGACC TCACGGACAC GGTCACGACA CCCCAAATCA TGCTATAGGT CAGAACGAGG ATGGGATTGC TAGAGAAGAG AGGACGTGGG CGGATCAGGC AGAGAATCAG GCATTGTGGG AAAATAGAAT GGGTCGTGCC GCACTCAGAG AATGGAGCCG CAGCGAAAAT GTTGCCGTGG AGTCTGGGCC GTCATTTTCA CCGGATGGAT ATATGGGCAT GGTCTTTCCT GAGTATGTGT ACCATCATCA CATTGAAACT ATTTGCTGAT GTTCTCTCTG CAGTTGGCCG AAAGACCTGC CTCCACCTGC AGTCATCGAA GTAAGTGATT TGCTGTTACC TCTGGATCAT ATGCTCATGT ATGGTTTATT AGCATGCTAT CAGAGTATTT TTCGAAAAGG TTCCCCTCTT ACCCAAGATG TTGAACAAGA CACTCCTTCT CCAATCTCTT CAGCGTCCGC CATCCAATCC CAATTTCGCA GTAAGTTTTC ACCATAACCC ACTGTATGAC CTAACAACTC ATCCGACGTA TTATCGTAGT GTGTCTCACT CCTCCACGCC ATCCTCGCCG TCACAGCCAA CTTCATCTCT GAAACTTCCC TTTCCTCCCC CGCTTACTTC CCGGTCGGTA CCCCATCCAA CGCCACCATC CATCCCGAAC ATGATTTTGA GATTCCAGCC AATCCTTTGA CGAGGGGTGG AAGCTGCAGC ATGCACTTTC AAAGCTCGAA CTTTAGAACG GCTATGTCTC CCATGGCCAG ATTTCAACTT TGGCACAGAC GAAAGGCCTT TGAAACGTTT TACCATTACG TCGATAAGGG AAACAAGTTC CTTCAATCTC TCCAAGGTAT GTTTCTATAG TTTTGACTGA ATACTGAGCT GTATTGCAGC ACAAATCATT GCCACCACAG TTGATCAGTA CAATGCATGG TGGACTGATA TCTGGCTTGA ATCTGGCTCA TGTATGAGGA TCGCGACTCC CATGCGAATC AACGAGTCTC CTCGTACGTC CATTTTCCCC TTCCCCTTCC CGTAACTTCA GTTTCTCCTT CATCTGACTG TATGTGTAGA TTGTGATGAA ACATCTCTTC GCCGATATGC AAGTCTTCTA CTTCCTCCAG CTCAAACAGC GTATGAGCAG GCTGAACGCG ATCGCACCTG GTGGTACGTC GAAATGTTGC CCGCAGTCTC TATTTTTGCT GATGAGCAAT CGACAGGATG ACATTTATCT TGGAGAGATC TGTGACTGCT GCTACTACTT GGCCTAGTGT AAGTCCGGCC TTTCCCCTCT TATCAAGATT GTGACCTGAC GATATGTAGT CCATGGTGAA TGAAGATATT ACCGTGGAGT TGCCGTGTTT GCAGAGCAGT TTTGACTCCG CTTCTGGTGT TTTGGGTGGA AGCCAGAGCT TCCAGTGAGT GCACCAGAAA CTGCTGTCTG TTTGTTTTTA AGCACAACAA GAGTTGACTG ATTATGATGC TTTTAGGTCG CCTGACCTCC TGACAAACCG TAAGTAATCC TTGTTGCACG TCTTTTAGCT GTAGACTCAT TGTCATTGCA GACCCACCCG AACATCGAGA TGTAAGAAAA TTTTTATGTG TATGTTATGT ATGACAGGTA CTAATTCCCA CTTCAAAGGG TTTGAGCTTC TTGATCAAGT CCCTCAAACT GCTTGGGGAT GTAAACTGCT TCTTCAGGCG CTACTCTCGC GGCCGGCATA GCATTGCGTA AGCGTCCTTA TACTTGCATC CATTTTTCTT AGAAAACTGA TGTCTTTTGA AGCGGCTATG TATCTAACCC TACTTTTCGC CTCTTACTTT CCCAAATCAA CGCTTTCCGC ATGTCATTCC CTCCCGAGTT TCGCCGGCCT ACACAATCCT TACCCGGGCT TGGAGGGGCG AAAGTCCTGG ATAGGGATCT GATCAACGCG CTTTGGATCA CACATAGGTC AGTATTCATC TTCAGCTCGA AATATAAAAG AAATTTTGCT GCAGTGAGGA AAAATGTTGA TGAGATATGA ACCTTAGCGC GATTATGGGA TTAGGAGAAC CGTTGATTAC TAGGGATTCG TGGATGGATG AAGGTGCGCG TGTTACTCTC TCTGCCATCC GAGCGACACT TTCGCTACTC TATGACGGTG GGTTGTACTT TGATTAATGC TGCCATTGGT TGATTAATGT TGTCATGTAG TGACTTCGAC GAGCTACGAT CTTTCCCTGT TCTCGCCACA TTGCACTTTT GTGTGGTCGC TCTCATGTCG GGGTCTCGTC AGGTTTATGG GGACTGCCCT GCAATCAGGC GATATGGTGT CTGCTTCTGT CTTTAGGTCT GAGATCGAAG TCTTCAGGTG AGCCCAGTGG GGGATACTTA GATACTTAAT TTAATGTCGG TTTATCACTG ACTAATGGTC TTCAGGATGG CATTGAAGAG GTACGGCGAA CGCTTCCCAA TTGGTATACG TCATCTCAAA GTAGTGGACG ATCTACTCAA GGAGATGGAA GTGAGCCAGG TAACAGGATT GCCTCTAAGC ATAGAATACG AGTAAGCCCA CATCTAAGCC CACATCTTTC TCGTGGTATA GAAAAGAAAG GCTGAATTTA GCTGACGTTT ATTTCAGCTG TCGTAAGACA AACTTAGGGG ATCGTCCAAT AGGAGTGTCA GTCACTGAAG AGACAGTGTC TTCTCAAGTT GTCACCCCAG AAACTTCGTC ATCTGTCGGC GATCTTAGCT TCAGTGCGAC AAGCGCATCT ACATATCCTG ATTCAACAAG CGCGAATGGC TCTTACACGG CTAGTAGACA AATTAACACC TCACAGGCGC CCAAGAACGT CAAGGCATCT TCGGTGGAAG GTCTTGGCAT GAATGTGGCG GGCATGCCAG CGATTGCTGC TACTTCTCCT TTACTTATGA ACCCTTCACC CGGTGAAGGG TTTGATATTT CAAGTTTCAG TTTTGACGTC AATAATGTGG TTGGAATGTT CGAGGGAGTC GAGGGGACTT TTATCGGAGC TGAATATGGA TTGTGGACGT CATAGAGATG TTCGTGCTGG CAGGAATGAA TTACCGAGGC ATACAT
|
Protein sequence | MDYSQIDPQL RSLDAQSPDN DSVSGTSNTP PRVLARNSAC HQCRKRKLKC DAQKPICGNC AKPRARGKSG DEQPHEDCTW DEPKEPSART KRRRELAKRQ AMESGHTDGK ESGEKTKRAR LNELEGRIAA FEGAMESQHY PTTTNPTPVQ TLQEAMPYAQ QTESNPYAAN GPYDYHRPPF SAGPLSDFTF GPHGHGHDTP NHAIGQNEDG IAREERTWAD QAENQALWEN RMGRAALREW SRSENVAVES GPSFSPDGYM GMVFPDWPKD LPPPAVIEHA IRVFFEKVPL LPKMLNKTLL LQSLQRPPSN PNFACVSLLH AILAVTANFI SETSLSSPAY FPVGTPSNAT IHPEHDFEIP ANPLTRGGSC SMHFQSSNFR TAMSPMARFQ LWHRRKAFET FYHYVDKGNK FLQSLQAQII ATTVDQYNAW WTDIWLESGS CMRIATPMRI NESPHCDETS LRRYASLLLP PAQTAYEQAE RDRTWWMTFI LERSVTAATT WPSSMVNEDI TVELPCLQSS FDSASGVLGG SQSFQSPDLL TNHPPEHRDV LIPTSKGLSF LIKSLKLLGD VNCFFRRYSR GRHSIAGYVS NPTFRLLLSQ INAFRMSFPP EFRRPTQSLP GLGGAKVLDR DLINALWITH SAIMGLGEPL ITRDSWMDEG ARVTLSAIRA TLSLLYDVTS TSYDLSLFSP HCTFVWSLSC RGLVRFMGTA LQSGDMVSAS VFRSEIEVFR MALKRYGERF PIGIRHLKVV DDLLKEMEVS QVTGLPLSIE YDCRKTNLGD RPIGVSVTEE TVSSQVVTPE TSSSVGDLSF SATSASTYPD STSANGSYTA SRQINTSQAP KNVKASSVEG LGMNVAGMPA IAATSPLLMN PSPGEGFDIS SFSFDVNNVV GMFEGVEGTF IGAEYGLWTS
|
| |