| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNM01030 |
|---|
| Symbol | |
|---|
| ID | 3255174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006682 |
|---|
| Strand | + |
|---|
| Start bp | 308020 |
|---|
| End bp | 309900 |
|---|
| Gene Length | 1881 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638254254 |
|---|
| Product | tricarboxylate carrier, putative |
|---|
| Protein accession | XP_568307 |
|---|
| Protein GI | 58261794 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0228158 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTACATATCT CATTACCCCA CATCCGCAGA TACTCCACTA CAATGGCCCC AATGGAGAAA
GGTTTCAGCT GGTCCAACAT CGCTGTTGGT AAGTTAGCTT TTCCTTTGCA TCTCAACGCC
CATCGGGTCT TCCGGGATGT TGCAGTCTGC GGTCAACCGG GACAAGTCGT GGTGATGAGA
GCGTAGAGTA CATGATCGTG CCCATTGACC ACGTATTTAT TGCTGTGCCA TTTCCGAGCT
TTCCCAAGTT TTCCATCGTG ATTCCATATG CGATCTCGCA TCTCAATTCC CACGCGTCGC
ATTACTCTCT TCAGAGCATC GTACTGACAC GATACATATA GGCGCCACTA TGAACATGTT
CGAAGTCACC ACCCTCGGCC AACCCCTCGA GGTGCTCAAG ACCCAAATGG CCGCCAACCG
AAGTCAAACT ATAGGTCAGG CTTTCAGTAC CGTCTGGAGT CGAGGAGGTA TTAAGGGGTT
CTATCAGGGT TTGATACCTT GGGTAAGTCT GATATTCTAT TTGTATTTAC TCTGTTGGTG
TTGTGTACCC TGTGGGCTAT TCCCGAGGAG CTCTAAGAGA GTATAGAGCA ATACTTTGGT
CTGCGTTCAG GCGATAGACA CCGCTACCGA ATACCACCAA TACGGCCAAT TTACAATGAT
ATAATCAGAA TGCTGACAAA TTTGTCCTGA ACAGGCCTGG ATCGAAGCTT CCACTAAGGG
TGGTGTGCTT ATCTTCACTT CTGCCGAGAT TGAGAAGGCT GCCGTCAAGG GCTTCAACCT
GTCCCCTGCT GCCGCCGGTA TGCTTGGTGG TATCGGTGGT GGTGTCGCCC AGGCGTACGC
TACCATGGGT CAGTCCACTT TCTTGTCCAT ATCTCGTAAG GGATCAAACT AATGTGATGG
CAAAACAGGT TTCTGTACTT GTATGAAGAC AGTTGAAATC ACCCGACACA AGCAAATGTC
TGTTGGTGCC CCCGTCGAAT CTACATTCAA AGTCTTCCTT GATATTTACA AGCGCGAGGG
TCTCGCCGGT ATCAACAAGG GCGTCAACGC TGTCGCTGTT CGGCAAGCTA CCAATTGGGG
GTCCCGTTTC GGTTTCGCTC GACTTGCTGA AGCAGGGTTG AGAAATATGA AGGGGATTAA
AGAAGGAGAA AAGCTGGGCG CGATGGATAA GATTTTGGCC AGTACGCTTG GTGGTGCTCT
GGCCACTTGG AACCAGCCTA TTGAGGTAGT CCGTGTAGAG GCACGTTCTT CCATTTCTTT
CCCGTCTTTC CATCTCACGC TAATATCTCT TCTTTAACCA GATGCAATCC GCTCTTAAAT
CCCAAGATCC CGCCCGACCG GCCAAGAAGA CTGTTCTCAA CACCCTCTCT TACATTTACA
AGACCAACGG TCTCAAGGGT CTTTACAGGG GTGTCACGCC CCGAATTGGC TTGGGAGCCT
GGCAAACTAT CTGTATGGTC AGCTTTGCTG ATTACGTCAA GGCTTTGTAA GTTATATGTA
GTTTGTCTGA ATAGCGACTT TGAAGCTCAT AGTTTTCCGA TCGTAGCATC GGCACCTCCA
AGTAAATGAG TTCATCGCAT CCAGCTCCTA CCCTCCCAAC ATCCAAAACA TCGATTCGTT
GTCGATACCC AAGTTGTCCA ATATAACCAT TTCCGTTTAC TTTTTTCAAA ACGCCATTAT
TTAGAGACGT TGATATGCCG GTATGGCCGT GAAGTTTTTT TTTTCCTTCC GCCTTGATGT
CGTGGGGACC GTATCCGTCC TCATTATACA GAGTTACAAT ACAAGTACAT ACACTTAGAT
GAGTTCAGTA GAGTTTCTTT TTTTTGGGAT ACAGTTGTTT TCAAGGTAAA CAAGATGCAT
GTGGACGTGG ACTTTTTTTC C
|
|---|
| Protein sequence | MAPMEKGFSW SNIAVGATMN MFEVTTLGQP LEVLKTQMAA NRSQTIGQAF STVWSRGGIK
GFYQGLIPWA WIEASTKGGV LIFTSAEIEK AAVKGFNLSP AAAGMLGGIG GGVAQAYATM
GFCTCMKTVE ITRHKQMSVG APVESTFKVF LDIYKREGLA GINKGVNAVA VRQATNWGSR
FGFARLAEAG LRNMKGIKEG EKLGAMDKIL ASTLGGALAT WNQPIEVVRV EMQSALKSQD
PARPAKKTVL NTLSYIYKTN GLKGLYRGVT PRIGLGAWQT ICMVSFADYV KAFIGTSK
|
|---|
| |