Gene CNM00860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNM00860 
Symbol 
ID3255267 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006682 
Strand
Start bp251513 
End bp253465 
Gene Length1953 bp 
Protein Length366 aa 
Translation table 
GC content46% 
IMG OID638254237 
Productconserved hypothetical protein 
Protein accessionXP_568396 
Protein GI58261972 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTTCGTCTTA ACTGCTATTC TCATCTTCAA TTTATACCTA TTTCCAGCCA TAGCCACGGC 
CCCACAGGGT AACTGGCCAT TTCCATAACC CCTTATACTT CTCCACACTC GTTAAGCACT
ACGCCCCGCG CACATCCTCA ACCATGCTCT CTACCTTCCG AACCGGCGTC AAGGATATTG
AACTCGCCAA CCCTCCTACA GACTCAATCT CTAGAATCGA ATTCTCTCCC ACCGCCGACA
TACTTGCTGT TGCGAGTTGG GACAACAATG TGGGTTGAGC AGCCGGTCAA TCCATTCTGC
TCTTATTAAT ATTGTCTGAA CTTTAGGTGC GGTTATACGA CGTAAACTCG CAAGGGCAGA
ACCAAGGGAA GGCGATGTAC TCTCATCAGG CTCCTGTGCT TGATTTAACT TGGTCGGCAG
TATGTTGCTT CCTATACAAC CCAATTATAG GCCTAACTGA TGTCTTTGAT CAGGACGGCC
AATATGTCTT CTCCTCCGGA TGCGACAACG CTGCTCAAAT GTACAACGTC CAAACACAGC
AAGCACAACA AGTAGCTCAA CATGATGCAC CCATAAAGTG TGTTGAATTT GCCGAAGTGC
CGGGAAGTGG ACAGGTTTTG ATTACAGCGG GTTGGGATAA GAAACTCAAG GTGAGAGACA
CAGGTTCTCC GTTCTTAAGC ATATTGGTGA CCTATCTCAG TACTGGGACT TGAGATCACC
CAACCCTATT GCAACTATCG ACCTCTCTGA TAGGGCCTAT TCGATGAGCG TTGCTCAACA
ACTGTTGGTC TGTGCTACCG GTGACCGTCA ACTGCATGTC ATCAATCTTT CAAGCCCTAC
CACCATCTTC AAGGTTTGTC CGCATATTGA TATACAACTG ATCGAAAGAG CTAATTTTAA
GGTTCAGAGT ATCGAGTCAC CGTTGAAATG GCAAACACGA GTTGTCAGCT GTTTTCCTAC
TGGAGACGCA TTCGCTGTTG GAAGTATTGA GGGACGAGTA GCTATCCAGT GAGTGATTTT
GTTGTATATT CAGGAGAAAA GCTGATCTCC TTGTATGTAA AGATACCCTG GAGAGGATGA
TAAGTAAGTT GATAGTGGAT AACGCACTGC GACAAACTAA TGATAACCAC AGGCGAAATT
TCTCTTTCAA ATGTCATCGA TACGACATCC CTACTGGTAG CATGCCGCGA ACTCCCGCCG
TCAGCGGCTC CCAGAATGTT TTCGCTATCA ACTCTCTCAC TTTCCACAAG GTGCAGGGAA
CTTTCTGCTC TGGTGGCAGC GACGGTAGTT TGACATTCTG GGACGGTATC TCTCGAACAA
AGCTTAAGAG TGAGCACTTC GGAGTCTTCT GTGCCGTAGT GTGTGGACAT GGAGCTGATG
AACCAACTAG CTTTCTCCTG CAAGGATTTG AACAACGGAG ACACAGATGT ACGACCACCA
AGATTTGGTA CTCCCATCGT GTCTACTTCC TTTAACCGAA CCCAAGAAAT CATCGCGTAG
TGGGTCATGC TCGGGCTGTT GCCTCATTTG ATCACTAACC AATGACTTCA AGTGCCATGT
CATATGATTG GTCCAAGGGC CACAGCGGTG TCCCACCTGC GGGACAAAAC ATTAACAAAG
TTATGTTGCA CCCTGTCAAG CCTGAAGAAG TCAACAAGAA GCCCAAGAGG AATTAAAAGT
GTTGAAATGA ACAAAGCCGT GTAAAGTGGC AGAGACCAGC ATTCTGGGCA TGGAGGAGAG
AGGAATTAGA CTGTAAGCAG GAAGCATCTG TCTAGTATTA ATTGGTGCTT TCTTCTAATT
CAGGTTATTC GTGAAGCATG AGTACGGTTT TTCGTGACCC ATCCTGTCGT TCGCCGAGTG
ATGAAGGGAT TGTCATATTT GGTTACCAAA TTCGTATAGC CTGTGTACCC TAGTTTCATC
CCTTTCGTCA AGCTCAATTT TGTTACAAAG CTT
 
Protein sequence
MLSTFRTGVK DIELANPPTD SISRIEFSPT ADILAVASWD NNVRLYDVNS QGQNQGKAMY 
SHQAPVLDLT WSADGQYVFS SGCDNAAQMY NVQTQQAQQV AQHDAPIKCV EFAEVPGSGQ
VLITAGWDKK LKYWDLRSPN PIATIDLSDR AYSMSVAQQL LVCATGDRQL HVINLSSPTT
IFKSIESPLK WQTRVVSCFP TGDAFAVGSI EGRVAIQYPG EDDKRNFSFK CHRYDIPTGS
MPRTPAVSGS QNVFAINSLT FHKVQGTFCS GGSDGSLTFW DGISRTKLKT FSCKDLNNGD
TDVRPPRFGT PIVSTSFNRT QEIIAYAMSY DWSKGHSGVP PAGQNINKVM LHPVKPEEVN
KKPKRN