Gene CNM00010 details

Gene Information

• Locus tag: CNM00010
• ID: 3255178
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006682
• Strand: -
• Start bp: 213
• End bp: 2368
• Gene Length: 2156 bp
• Protein Length: 424 aa
• GC content: 47%
• IMG OID: 638254161
• Product: transporter, putative
• Protein accession: XP_568395
• Protein GI: 58261970
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2271] Sugar phosphate permease

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACAAT TGAGTGAGAC GCCTGGGGTG GAGTCCACGT CTTTCGACTT GGACTATGAG 
GACCTGTCTT ATACGCGACA GCGTGAGAGG AAGTTTTTAT GGAAACTGGA CGTGTGTCTC 
ATTTCATGGG CATGGCTAGC TTATCTTATC AAGGTAAGTT TGTGACCTTC TCCATATATT 
ATCGTTGGAT CATCGAAGGT ATGACAGTGG ACGGGAAGGC TGATGGAGAT GTAGCAAATC 
GACTCATCAA ACTACAAGAC CGCTTACGTT TCGGGGATGA AAGAGGATGT GAGTGAGAAG 
ATTCCACGAA AATGTCCGCT GAATGTAAAC TTGTTAGATG AAACTGGATG CCAATGAGCT 
CAATTATCTC AACACCTACT TTAAGATAGG ATATGCCATA TTCCTCCTTC CTTCCCAAAT 
TATCTTGACA CGTGTCAGAC CTTCTCTCTG GCTTCCGCCA CTCGAGCTCT TATGGGGCGT 
GATGACAGGC TTAATGGCTG CAGCGCACAA CGTGAAGGGG ATGTACGCAC TTCGATTCCT 
CATCGGCGCA TTTGAGGCCT CATCATATCC CGGCATCGTG AGCGTTCTAT GTAACTGGTA 
GTAGGTCTCA GTCCATACAC AATTCGTGGC GCGGGAGGCG ACACATCAGC TGACAGTGAT 
ACAGTACACC TTCGGAGCTC GCAACAAGGA TAGCGTTGTT TGGCACGTCT TATCCCGCGG 
CATCGATGTT TGTCTCATTC ATGCAGGTCG CAATTCAGTC GACCCTTAAC GGAACGCGTG 
GCATTTCTGG GTGGAGATGG CTGTTAGTAG CTCAACATTT ATTTCATAAT GCTTGGCTGG 
CTGACTACAT ATTCCAAGGT TTATTTTCAA CGCCATCATG ACTATCCTCG TTGCCGTCGC 
TGGCTTTTTC CTCGTACGCC ATTCCAAATT TTCAATGTCA AAAATAACAC CACTGATCTC 
AAACAGGTAC CAGATTCTCC CGGGACGACC AAAGCTTATT GGATGTCAGA GGAAGACAAT 
CGGATATCTG CTGCACGTAT GGCAAGAGTT CACAAGCAGC CGCCAACTGT AAGTGTCTAC 
CCCGATCTAG CGACAATAAA CTGAAAAATC GAAACATTAC TAGAGATTGA CCAAGGCTAT 
TCTGAAGAAA ACATTCACCG GTTGGCCTCT TTACATCTTC TTCGGAGCGT ATGCGTACGT 
ATCATCGACG CAGTTGACTG CGCTAACCTC TCAGTTTTGC AGCCTGGGCT GCAGATGCGA 
ACTCATGGTT CATGCTCTGG CTTAAAGCTT TGACTCATCC TGACGGGTCC AAGCGTTTCA 
CCATTCAGGA GATCAATGCG ATTCCCATTG GTGGCTTTGC GCTGATGCTC GTCTTGATGC 
TGCTCTTCGC ATGGCTCAGC TCGAGAACGG GGTGGAGAGC TACCTGGGTC TCTGTGCAAA 
ATGTAAGTTT CGACTTCTCG CCGACATGCT TTTCCCCTGT CCCCTGTTCT GATGTTATGT 
AACCCAATAG ATTCTTTTCC TCATCGGCTG TATTATACTT TCTGTGAGTT TGAGTCACAT 
CGTGGGCCAT TCCTAGAACA CAAACTTATG GTTTAGGTTT GGCCTGAGGG AGTCCCAATC 
AAAATGGCCG GCTTTTTTTT AACTTACACA GCAAATGCTA TCTCGCCAAT CCTCGTCGTG 
AGATCAAATC AACCATTCTC GCTGCAGGCA AATTTGCTGA GGAACATTTT TAGGCTTGGA 
TGGCAGACAT GTGCCCCATT CCAGAGGAGC GAGCCATAAT CATCGGCGTT ACCGTTAGTC 
TCGTTTACGC CATGGACAGC TGGATGAATC GTGGGTCCCA AATCAAATAC AGAACGCAAG 
CAAGCTGATA CACAGCAGTG TTCATATACC CAGCAAGTCA AGCGCCAAAA TATAAGGTCG 
GTTACAAGGC AGCAGCCGCC TTTACCATTG CGAGCATTAT CTTCACAGGG ATTTTCAAAA 
TGCTCGAGGC AAGAGACAAG AGATTGTCAG CTGCCACAGT TGCAGAGAGC TCAATTTCAC 
CACAACGCGG TCGAGAACTG GAATTTCAAG ACATTGAGGA GGAGAAGTGA GTACATATTC 
AACGATAGAT CGGTTGAACT GTATTCCGAA AATCGACCAA TCCTTCGAGT ACCTCT 

 

Protein sequence

MKQLSETPGV ESTSFDLDYE DLSYTRQRER KFLWKLDVCL ISWAWLAYLI KQIDSSNYKT 
AYVSGMKEDM KLDANELNYL NTYFKIGYAI FLLPSQIILT RVRPSLWLPP LELLWGVMTG 
LMAAAHNVKG MYALRFLIGA FEASSYPGIV SVLCNWYTPS ELATRIALFG TSYPAASMFV 
SFMQVAIQST LNGTRGISGW RWLFIFNAIM TILVAVAGFF LVPDSPGTTK AYWMSEEDNR 
ISAARMARVH KQPPTRLTKA ILKKTFTGWP LYIFFGAYAF AAWAADANSW FMLWLKALTH 
PDGSKRFTIQ EINAIPIGGF ALMLVLMLLF AWLSSRTGWR ATWVSVQNIL FLIGCIILSV 
WPEGVPIKMA GFFLTYTANA ISPILVAWMA DMCPIPEERA IIIGVTVSLV YAMDSWMNHI 
EEEK