| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNL06560 |
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| Symbol | |
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| ID | 3254981 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006681 |
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| Strand | - |
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| Start bp | 829079 |
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| End bp | 830720 |
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| Gene Length | 1642 bp |
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| Protein Length | 409 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638254131 |
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| Product | t-SNARE, putative |
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| Protein accession | XP_568177 |
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| Protein GI | 58261534 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5325] t-SNARE complex subunit, syntaxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.155233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGTGATTGTA TTATCTGGTC GTCCTAGACA CCGTCTACGA CACTATTTGT GCAAGCGGGA
TATGTCCAAC TACAATCCTC TCTCACCAGC TGACGAACCG ATCACCCGCT CTCGAACGCT
CTTCTTCCTC TCCATCCGCG ACTCCAACCC ATTCTCCCGC GCCCGACCTA GTAGAGAATA
CGGTCATCAA ATCAGCCTTG ATGATGATGG TGATGGTGAG GGTGAGGGAG AGAGACTAAT
AGGTGGGAGA GAAGGGTGGA AAGAAGTTGG AATGAAAGGG TTACCGCCAA AATGGGTAGA
TCTGAGCGAG GAGGTGGAGG AGATTCTGGG ACGGACAAGG AACAAGAGTG GGTGGATTCT
TGGACTTTGA AATCCGGTTG AGTTGGCTAA CTTGGTGAAT TTTGGTACAG TCGCTGTTTT
AGATAAGCTA CATGCGAAAC ATGTCTTACC TGGCTTCACA GATCGGTCAG GCGAAGAACG
TGAGATTGAG AAACAGACGA TTGATATCAC TCGTGTAAGT CGCGAGAATT ATGTCCTCTT
CCACATTTTC ACTGAAATAA AATTTAGGAT TTCAGACGCT GTACATCTCT GATAAGCAGT
ATCACCCCAG AACGCGGCGC GCCTCGTGTG CAAGTATTAA CCACGAAGAA TGTCCAGCGT
GGTTTGGCGC AAAAGGTGCA AGAAATGTCG GGACAGTTTA GAAAGAAGCA AAAAGTTTAC
ATGTCCAGTA CGTTTTTGCT ATGGTTTGGG GTGGATGCTA CTGTGAAATA GACGTTGATC
ATGCCTCAAC CTTGTTTCTT AGAATTACAA GGACATCAGA TTAAGAACAA GGACTTAATG
GTTGCTAGCG GGGCGATCAC ATTAAAGGGT ACAGAAGTAC TTGATGAATT ACAGGAAGAC
GAACAAGCCG TAAGCACCTT CATCTTCTCC ATCCATGGTC TTTACCCATA CTGTTACTGC
AGTCTCAAAA CCAGCTCTCC CAAACGCAGC AAGCACAGTC CGCAGTAAAC ATTGACATCC
AGCGACGATC TCGTGAGATT ACCCAGATCG CATCTTCCAT TTCTGAACTA GCTGAGCTCT
TTCGGGATCT GGGTCAGATG GTTGTTGAGC AAGGGACAGT GTTGGATAGT GTAGAATGGA
ATGTGATGGA AGCGGCAAAG GAGGTGAAAG GTGGAGAGGA GGAGCTGGTT GTCGCCAGAC
GGTAAGTTTA TCTTATCCCT AGCAATCATT AGTATGGAAT TGATAAGTGG CTTAGCTACC
AAGCCAATAC GGCTCGGCGA AAATGTATCT TCTTCCTCCT CCTCTGCATA TTCGCCCTCA
TCCTTATTCT CATCTACAAA CCTCGCTCAC ATTCTTCCCC TTCTTCCCCC GCTTCGTCCT
CATCCTTGTT ATCATCAAAT TCTACAGCTA CATCGTCGTC TTGGGGGAAG TCAACGGCTC
GTGTGAGGCC TTCGCATGCG AAAGGGAGTG GGAAAGGTGG GATTGTGTTG CCGAGCAGTA
CAGGCTCAAC TGGAAAAGGA AAGGGACGAC CGAGTCTTCC GAGACCTCCG CCTTTAGCGA
GTACAACGGG TCGGCATGGG TCTTCATGAT GATCTGGAGA AAAGACGGAG AGGGGCCTTG
TATGCCTTTT ATAGTGCACC AC
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| Protein sequence | MSNYNPLSPA DEPITRSRTL FFLSIRDSNP FSRARPSREY GHQISLDDDG DGEGEGERLI
GGREGWKEVG MKGLPPKWVD LSEEVEEILG RTRNKIAVLD KLHAKHVLPG FTDRSGEERE
IEKQTIDITR DFRRCTSLIS SITPERGAPR VQVLTTKNVQ RGLAQKVQEM SGQFRKKQKV
YMSKLQGHQI KNKDLMVASG AITLKGTEVL DELQEDEQAS QNQLSQTQQA QSAVNIDIQR
RSREITQIAS SISELAELFR DLGQMVVEQG TVLDSVEWNV MEAAKEVKGG EEELVVARRY
QANTARRKCI FFLLLCIFAL ILILIYKPRS HSSPSSPASS SSLLSSNSTA TSSSWGKSTA
RVRPSHAKGS GKGGIVLPSS TGSTGKGKGR PSLPRPPPLA STTGRHGSS
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