Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNL06550 |
Symbol | |
ID | 3254993 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006681 |
Strand | - |
Start bp | 824093 |
End bp | 825090 |
Gene Length | 998 bp |
Protein Length | 269 aa |
Translation table | |
GC content | 58% |
IMG OID | 638254130 |
Product | orotidine-5'-phosphate decarboxylase, putative |
Protein accession | XP_568176 |
Protein GI | 58261532 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.115741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCACC CGACCACGCT CAAGACGTAC GCCTCTCGCA TTCCCTTGCA CACCAACCCG ACCGCGCGGC GGATCCTGAG CATCATGGAC CGCAAACGCA CGAACCTGTG TGTGAGCGTG GACGTGACCA AGGCGGCCGA GGTTCTGGAG GTTGTCAGAA GGGTCGGCGC GAGTGTCTGT ATGGTCAAGG TGCGTTATTA CACGGGCGCG GGAGGGGCGG GGGGGTCAAA GAGAAGAAAC AGTGGGTGAG GGACTAGGTT TTTGGCTGAC TGTTTTGTCT GCGTGGTTGG GTATTTATCC AGACGCACTG CGATATTATT GAAGACTTTA CTCTCGAGTT TGCAGATGAG CTTGTCAAGC TTTCAAAGCA GCTTGATTTT GTGATTTTCG AAGATCGCAA GTTTGCGGAT ATCGGTGAGA TTTTTTTATT TTCCAACTGT CGTCGTCGTC ACTTGGGTAC ATGGAAGCTA ATACATCTCC TAACAAAAGG CAACACGGTC TCCCTGCAGT ACTCTTCCGG GACGCACAAG ATTGCTTCGT GGTCAGACTT GACCAATGCG CATTCCGTCC CCGGCCCTGG TATCATCACC GGCCTCGCGT CTATCGGTCT CCCCCTCGGA CGTGCGCTTT TGCTGCTCGC CAACATGTCT TCCAAAGGCG CGCTCGCGAC TGGGGAGTAC ACGAAACAGA CGATGCGAAT GGCGCGCGAA GCCGGGCGGG AGTTTGTCGT CGGGTTTATC GCGCAAGAGC GGGTAGACGC GGGAGAAGAC GGGGACTGGC TGATCATGTC CCCCGGGGTG GGGCTGGCCG CCAAGGGGGA TAAGCTGGGG CAGCAGTACA GGACGCCGAA AGAGGTGGTG CGCGATGCCG GGGCGGACGT GATTATCGTC GGACGAGGGA TCTATGGGGT GCAGGGCGGG GAAGAGGCGG TCAAGGCGGA GGCGGAGAGG TACAGGGAGG AAGGGTGGAA GGCGTACGAG GAGAGGCTGA GTAGATAG
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Protein sequence | MPHPTTLKTY ASRIPLHTNP TARRILSIMD RKRTNLCVSV DVTKAAEVLE VVRRVGASVC MVKTHCDIIE DFTLEFADEL VKLSKQLDFV IFEDRKFADI GNTVSLQYSS GTHKIASWSD LTNAHSVPGP GIITGLASIG LPLGRALLLL ANMSSKGALA TGEYTKQTMR MAREAGREFV VGFIAQERVD AGEDGDWLIM SPGVGLAAKG DKLGQQYRTP KEVVRDAGAD VIIVGRGIYG VQGGEEAVKA EAERYREEGW KAYEERLSR
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