Gene CNL06080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNL06080 
Symbol 
ID3255013 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006681 
Strand
Start bp680316 
End bp681997 
Gene Length1682 bp 
Protein Length453 aa 
Translation table 
GC content52% 
IMG OID638254084 
Producteukaryotic translation initiation factor 2B, subunit 2, putative 
Protein accessionXP_568136 
Protein GI58261452 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1184] Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.261461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTGTTGCCC TTCGAATTGC GTGAATCCAC TATCAGAGCA GGAAAATGGC CGTCGACTCC 
GCCCCGGTGA GTTGGACAAA AAGTCTAAGG GAAAGTTCCT TCATGCGGCT GACGTCCTTA
ACAGCAAATG CAGAAATCTG CTGACCCAAA CGCTCGATTG ACTGATACTC TTTGCACCAG
TCTTCGGAGA CGGTGAGTCA TGAGTCCGTA CGTACCTTTT ATATGCTCAC GTCTCGTATT
TTAAGGCAAA TTGTTGGATC CTTGAACGTG GCTCTCGCAA CGGCTGCTCT CATCCAGAAC
ATCGTCAGAA GCGCTAGATA TAACACCATC GACGAATTAC TGGCCTTAAT CAAAGCTGTT
GGGCGGAAAC TCACTGAGGC CAACCCTAAG GGTATGTACA GCTATCACAC ATCTGGAAAT
GTATCTCATG CTTCTCGTAG AACTTGCCGC CGCCAATATC ATTCGTCGAA TCCTCCGTCT
CATTCGGGAA GAATACCGCG CCGCTGCAGC CGCCCATGTC TCATCCGCCC CTAACTCCAT
CCCTTCTACC CCTCTTATGG GTCCCAGCAC ACCAGGTATC AACGCACCTT TAGATCACTA
CCTTTCTGCC GCCCAATCCG CCACCGTCGA CGCTCAGTAT TTTCCCACTC ATATCCAAAT
GTCCCGCCAG ACTTCACTCT CAAACTTTGT GGCCATGCGT CACTCTCGAG CTCAGATGGA
AAGGAGTGGC GCCCTTAGTG GAGGGACAGC GGAAGGATAC TCAGCGAATA CAACGAATTT
GTTTGCGACC CCCAATGGGA ATGGGCATGG CAGAGGTTCT TCTGGAATGG CGACGCCAAG
GGCGAGTGTG GATAGCGATG AGTTTATGAA GCATAGTGCT AAGCTCAAGC CGTTATTGAT
TCAGGCCATT GAGGAGGTTG TTGGTGAGCT GGAGACCACG CATGAGGATG TTGCCAAGGG
CGCAAGGGAG CACATTCACT CTTCGTAAGT ATCGCGCATT CACTTTGTTC CCGCCGGACT
GCTAATGCGA GGTAGCGAAA TCATCTTGAC CATGGGCCAC TCGAGAACAG TCGAAGCATT
CCTCAAGCAA GCCTACAAAG ACCGTAAATT TACCGTCGTC GTCGCCGAAT CTGCTCCGTC
CTACCTCGGT CACTCCCTCG CCTCTTCCCT TTCCGCCTCC GGCATCCCCA CCCTCCTCAT
CCCTGATTCC TCCATCCACG CCCTTCTTCC ACGAGTTACA AAAGTCATCC TTGGCGCTCA
CTCTGTCCTT GCCAATGGTG GTTTGTTCGC GCTGTCCGGA TCTCTTGCTT GTGCTCTCGC
GGCAAAGACA CATTCCAAGC CTGTCGTCGT GACTACCGGT CAATTTAAAT TCGCGCCCGC
GTGGAATTTG TACCATGAAT ACGGAGCGGT GGATTTCCAG GGACCTGGAG CTGTGATTGG
GGAGCAGGGG AAGGGTGGAG GAGGGGGTAT GGAAGGGGTT GAGGTTGTGG ATCCATATTA
CGATTATATT AGGCCCGAGT TGGTAAATCT GTTTGTGACA AATGAGTAAG TGTACTTTTT
GGATGTAGAG TAGCACGTGG CTAATTTAGT CTGTAGAGGC GACCACCCAC CATCTTACAT
CTACCGCTTG ATCAAAGAGG CGTACGATGA TGAGGATGTA GAGATCTAGT CACAGTGACA
TC
 
Protein sequence
MAVDSAPQMQ KSADPNARLT DTLCTSLRRR QIVGSLNVAL ATAALIQNIV RSARYNTIDE 
LLALIKAVGR KLTEANPKEL AAANIIRRIL RLIREEYRAA AAAHVSSAPN SIPSTPLMGP
STPGINAPLD HYLSAAQSAT VDAQYFPTHI QMSRQTSLSN FVAMRHSRAQ MERSGALSGG
TAEGYSANTT NLFATPNGNG HGRGSSGMAT PRASVDSDEF MKHSAKLKPL LIQAIEEVVG
ELETTHEDVA KGAREHIHSS EIILTMGHSR TVEAFLKQAY KDRKFTVVVA ESAPSYLGHS
LASSLSASGI PTLLIPDSSI HALLPRVTKV ILGAHSVLAN GGLFALSGSL ACALAAKTHS
KPVVVTTGQF KFAPAWNLYH EYGAVDFQGP GAVIGEQGKG GGGGMEGVEV VDPYYDYIRP
ELVNLFVTNE GDHPPSYIYR LIKEAYDDED VEI