Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNL06030 |
Symbol | |
ID | 3254982 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006681 |
Strand | - |
Start bp | 665268 |
End bp | 668040 |
Gene Length | 2773 bp |
Protein Length | 563 aa |
Translation table | |
GC content | 53% |
IMG OID | 638254078 |
Product | protein-nucleus import-related protein, putative |
Protein accession | XP_568231 |
Protein GI | 58261642 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATTTCTTCCT CGACTAACGC TTGACAGAAA ATCTACAACC ACAATGGAAG ACGACAGAGA AATGCGCGGC GACGAACCTA TGGCCCCGGA GGCTGGAGAT CGATGTGGGT CTTTTTCGGA TTGGATTAGA ACAAGGTTGG GTTTGGGATT GGATTGTGTT GGGTAGGGTA GAAAGAATGC GAGAACGGAA AGGACCGGAG AGGTTACCAT CTTCAGGCTA GATGGTCAGC CAAAGATGTG CCAGATGGCA GGCGAATGGA TATTGGGCTG GTAAAGTTAG GATGAGAAAA GATGGCGGGG ATTGAAGCAG TGAGCCGAAG GGAAACGCGC AAGCGGACGT GGACACCCTG CCATCTTAAT CCTCAACACC GCCCCCATCC CCTTTCCCAA TCCACCCTTT TCCTTTGTGC CTCGATTTTC GGAGTTTGGA GTTTAGAAAT TGTATGGTAC GGATAGAAGG ATGGAGGAGC TGATGGATGG ATTGGATGGA CGTCAGATCG AAGGGACGAT CGAGATAGGA GCAGGAGCCG AGAACGCCAC AGCAGCAGAC GCGATGAGGA CCGTTACCGA AGCGTGAGTC GACTTTCCTT TACGGGTGGT ACGTTGAGGG GCCGGGCGCT GGAGCAGTAG ACTTTTTCTA TCCATTGTGG ATTCAGGACC TAACGCAAGA TGACGATGGG GGGATGGATA TCGATGAGCA GCGTCGCAGA TCTTACTCTC GTTCCCACTC GCGCTCCCGA ACTCGCTCTC CTCACCGACA CCGACACCGT TCCCCTTCGC GTTCTCGATC TCGTTCTCGC GACAGGCGCG ACAGGGACCG CTCTCGATCC CGTGACCGTG GGGAGCGACG AAGTTACAGG GAAGACCGTC ATGGTGGTGA CCACCGTGGT AGCGGCCGAC CTCGTTCTCC CCGACGTGGT TCAGGTAGGT ATGGTGCGCC CCGACAGGAC TGGGAGAAGA GTGTCGACGG GCCTATGAAC GCGCCTGCTT CCGAGGCCGA GGCTCACGCC AAGGTCAGCA AGAGAGAGAA CAGGTTGTAT GTGGGTAACT TGGCGTATGA CTGCAATTAC AAGGATCTTG CCAACTTCAT GGAGCGAGGT AAGTGATATA CAACGAAGCG GGCATTCTTG CTGATTTTAT CTCAGGTGGT GGTAAAGTAG TATTCTCTGA GGTCCTCACC ACCCCTGCTG GTCAGTCTAA GGGTTGCGGG TGAGTATTTC ATGAGGAAAG TTCAATCAAT TCTCATGAAA GTTACAGTAT TGTCGAATTT GCCTCTCAGG AGGAAGCCCA GCGAGCCAAA GCCGAGCTCT CTGACAAGGC CTTCTTTGGT CGATCCGTCT TTATTCGAGA AGACCGTGAA GAGACTGCGC GATTCGGCGC TCCTCCCATC CCCGGCAAGA TTGGTATCGC CCTTGGTGAA GCTCGTCATT TCCTTGGTAA TCAGCAACCT CACGGATTCC ACGGCCACGG CCCTGCTATT CCTAACAGGA ATCTCTTTGT CGGTAACGTA AGTTTTCCGT CTGTGGCCTG CTGTGAATAC AGTTAACCCT TTTGGTACAG CTTCCTCTCC AAGCTTCATG GCAAGACCTT AAGGACCTCA TGCGTCAAGC TGGAGAAGTC ATCCGTGCCG ATATTGGTTT CAGGCCTGAC GGTACTCCCA AGGGTAACGG AACAGTTGTC TTCTTGAACG CGGATGATGC CAAGGCTGCT ATTGAGATGT TCAATGGCTT TGATTGGTTT GGTAATGTCC TTGAAGTCCG AGAGGTCAGT GTTCCATCTC CAGCTGGGCT GTCACTTCAA TGCTCACAAT TCATCGTAGG ACCGATTCGC CCACGGCGGT GCTTTCCGCG GCCGAGGTGG TTTCCGAGGC GCTTTCTTCC CTCGTGGCGG TTTCGGCTTC CGTGGTGGCT TCCGAGGCGG TTTCCGTGGA GGGTTCATGG GTGGGGGTAT GGGCATGGGC CACATGGGCA TGAATGCGGT CGCTGGTGGT GTTGGTGCCG GCGGTGCTGC AGCTGCTGGC GGTAGGAATT TCAGCAACGA CCTCTATGCC GACTACAACG GACCTGAGGG CGGTGAGGGT ATGGCTGTCG ACCAGGTTGC GCCATCGGGT TTGGAGCCCA TTCCCGCCGA GCCCAACCAG CAGATTCTCG TTCGTAACGT GAGTATCCAC CTGTATCTGA TCGTGTTCAC GAGTTTATTA ACCATGTTTC AGCTCCCGTG GTCAACATCC AACGAAGACC TCGTCGAACT GTTTGAGACC ATCGGCACCG TTACCCTTGC CGAGATCCTC TACTCTGGTG GTCAAAGTAA GGGAGAAGGT ATCGTTCAAT TTGCGGAGAC GGCAGACGCG GCGAATGCAT CTGAGAAGTT TATGGGATGG CCTTATGGTG GTCGTGCTTT GGGTAAGTTC AGCCTCGACC TCAACTCAAA TGTCCAGGAG CTAATGCTAC GGTGAAATAG ATGTGCAATT CAACCCCAGG TGGCACGAGT TCTCTGCTTC GGCTATCAAG GTTCCCCAGG CGTAATTGGC TGGAATTGAG AGGAGGTCGA GTGAAAGGAT AAGTCGCTAT TAGATGAAGT GGAGAAAAAG TATAGGCGAT GGAAAGGTTT GGAATGCAGG ATCTCTATTC ATTTGTGTAG TAATTGCTAT ATTGTCTGCG TCGCTTCTCT GCGCCTCCTG TTTCTGCTCT ATTCGGAATT CATTGCGTCT GATGACCAAG AATAAATAAA TAATGGATCA ACCTCGCAAA TTTGGGTTTG TAACCTTATC GAA
|
Protein sequence | MEDDREMRGD EPMAPEAGDR YRRDDRDRSR SRERHSSRRD EDRYRSDLTQ DDDGGMDIDE QRRRSYSRSH SRSRTRSPHR HRHRSPSRSR SRSRDRRDRD RSRSRDRGER RSYREDRHGG DHRGSGRPRS PRRGSGRYGA PRQDWEKSVD GPMNAPASEA EAHAKVSKRE NRLYVGNLAY DCNYKDLANF MERGGGKVVF SEVLTTPAGQ SKGCGIVEFA SQEEAQRAKA ELSDKAFFGR SVFIREDREE TARFGAPPIP GKIGIALGEA RHFLGNQQPH GFHGHGPAIP NRNLFVGNLP LQASWQDLKD LMRQAGEVIR ADIGFRPDGT PKGNGTVVFL NADDAKAAIE MFNGFDWFGN VLEVREDRFA HGGAFRGRGG FRGAFFPRGG FGFRGGFRGG FRGGFMGGGM GMGHMGMNAV AGGVGAGGAA AAGGRNFSND LYADYNGPEG GEGMAVDQVA PSGLEPIPAE PNQQILVRNL PWSTSNEDLV ELFETIGTVT LAEILYSGGQ SKGEGIVQFA ETADAANASE KFMGWPYGGR ALDVQFNPRW HEFSASAIKV PQA
|
| |