| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNL05860 |
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| Symbol | |
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| ID | 3254976 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006681 |
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| Strand | + |
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| Start bp | 627680 |
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| End bp | 629847 |
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| Gene Length | 2168 bp |
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| Protein Length | 561 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638254062 |
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| Product | Succinyl-CoA:3-ketoacid-coenzyme A transferase, putative |
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| Protein accession | XP_568119 |
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| Protein GI | 58261418 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit
[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit
[TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.124065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAAGAGCCCC ACGTTTGCCC CTCATTCTGC TTTCGTTTCC TCCGCTTTGT ATACACTCCC
CTCTCATACT AGAGCTTAGA ATTAAAATAA TGATCAGAAC AGCCCTTCCC ACCACCCGTG
CCCTTGCCCG CTCAAGAGTC CTCCACCGAG CTGCTGCTCT TGCCCGACCT GGTGCCATCA
CTGCCTCTCG GTATATCAAC ACCGAACCCG TCAAGGGCTC TCCTTCAGAC CTCAAATCCG
TCCCTTCCCA AGGCACTCAT GGCCGATCTC GTATTACTCC CAGCGAAAAG TCGAAGGTCT
GGCCCGATGC AAAGACTGCT ATCAGAGACA TTAAGAACGG TCAAACTATC TTGTCCGCTG
GTTTTGGACT CTGTGGTACT GCCGAAACTA TCATAAAGGC TATGAGGGAG AGTGACTTGA
AGGACTTGAC TGTCGTCTCC AACAACGCTG GTAACGCCGG TACCTACGGT CTCTGTGAGT
TTACAGCTTT CAAGACTTTT TTTTCTTGGC GCCAATAGAA ACGCGGCGTT AGAGCTCGTT
TGCGCCGCGC TCTGAATGAC GTCGAATGAT AGAAGGCTAA TGACGCATCT CCCAACGACA
GCTCCCCTTA TCACCTCTAA ACAGATCAAG AAAATGATCT TGTCTTATCT CGGTACCAAC
AAGGGCCTCC AAGATGCCTA CCTTTCCGGT GAAATCGAAA TTGAGCTCTG TCCCCAGGGT
ACCATTGCCG AGAGACTCCG AGCTGCTGGT GCAGGTATGC CCGGTTTCTT CACCAGGACT
GGTGCTGGTA CAGATGTCGA AACTGGCGGT ATCCCTCAAA AGTGGTCCAA GCCTGATGCC
GATGGCAAGC AGACTATCGC TATCCCTGGT GTGAAGAAAG ACACTCAGGT GTTTGACGGC
AAAAAGTTCC TCTTCGAGCC TGCCATTCAC GGTGATGTCG CTGTTTTCCG AGCTTGGAAG
GTTGACAAGG CCGGTAACTG TGTCTTCAGG TGTGTCTCCT CTCTTAGTGA AAATGTCAAT
AATAAGCTGA TGGTCGTAGG TACACTACCC GAACTTTTGG TCCTCTTGTT GCCCGAGCTG
CCAAGCTCTC CATCGTCGAG GCGGAGAACA TTGTCGAGAT CGGCGAGCTC GACCCTATGG
AGATCGACCT CCCCGGTATT TTTGTCGACC GAGTTGTCCC TGCCACCGAG GACAAGCAAA
TCGAAATCTT CACCACCCGA GAGGAGAACG AGAATGTCTC TCCCTCTTCT GGCGAAGAGA
CTTCTGTAAA TAAGAGCGTT GGTCAGGCTC AGCGTGAGAA GATCGCTCAA CGAGCGGGCA
AGGAGCTTTA TGATGGTGCC TACGTCAACT TGGGCGTTGG TATCCCCGTC TTGGCGGCTA
ACTACTTGCC TGATGGTATG AAAGTCTGGG TCCAGAGTGA GAACGGTATC TTGGGTATGG
GCCCTTACCC AACCAAAGAG GAGGTGGACG CGTATGTTTA ATTTCCTTCT TTTTTTTCAC
AGAATCCATC CTGACCTTGT CACACCAGCG ACATCATCAA CGCCGGTAAA GAAACCGTAA
CCCTCGTTCC TGGTGCTTCC GTATTCGATT CCTCCGAGTC CTTCGGTATG ATCCGAGGTG
GTCACGTCGA CGTATCCATC CTCGGTGCCA TGGAAGTTTC TGCCAACGGT GATCTCGCCA
ATTACATGAT TCCCGGCAAG CTCGTCAAGG GTATGGGCGG CGCCATGGAC CTAGTCTCCA
ATCCTGACGA GACCAAGATC GTTGTTGTCA CCACACATAC CGACAAACAC GGTCGACCCA
AGATTGTCGA GTCCTGCAAA CTCCCCTTGA CTGGTGTGTC TGTCGTTAGC AGGATTATTA
CCGACCTCGC TGTCTTCGAC GTTGACAGGA CCGGCCAGAA CGGTGGCGGC CTCGAGTTGA
TTGAGATTGC TGAGGGCGTT AGTCTCGAGG AAGTCCAGGA GAAGACTGGC GCTACCTTCA
AGGTTAGGGA GCCTCTCGGC AGGTTCTAGG GGGTGTGTGA AGATTGCGTT TGATTATCGT
AAGAAGTTTA TGACCTAAAG GATATAAAAG TGTACATATG GTAGTAATAG ACATGTAGAG
GACTCGATAT AGACTGTAGA CTTTGCATGT TTGGACGTTT CTTTCTTGAT GCATTGCATT
TCTTATCT
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| Protein sequence | MIRTALPTTR ALARSRVLHR AAALARPGAI TASRYINTEP VKGSPSDLKS VPSQGTHGRS
RITPSEKSKV WPDAKTAIRD IKNGQTILSA GFGLCGTAET IIKAMRESDL KDLTVVSNNA
GNAGTYGLSP LITSKQIKKM ILSYLGTNKG LQDAYLSGEI EIELCPQGTI AERLRAAGAG
MPGFFTRTGA GTDVETGGIP QKWSKPDADG KQTIAIPGVK KDTQVFDGKK FLFEPAIHGD
VAVFRAWKVD KAGNCVFRYT TRTFGPLVAR AAKLSIVEAE NIVEIGELDP MEIDLPGIFV
DRVVPATEDK QIEIFTTREE NENVSPSSGE ETSVNKSVGQ AQREKIAQRA GKELYDGAYV
NLGVGIPVLA ANYLPDGMKV WVQSENGILG MGPYPTKEEV DADIINAGKE TVTLVPGASV
FDSSESFGMI RGGHVDVSIL GAMEVSANGD LANYMIPGKL VKGMGGAMDL VSNPDETKIV
VVTTHTDKHG RPKIVESCKL PLTGVSVVSR IITDLAVFDV DRTGQNGGGL ELIEIAEGVS
LEEVQEKTGA TFKVREPLGR F
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